RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 LRRC69Q6ZNQ3 347 aa9.31□□□□□ -0.92
EFCAB13-213ENST00000523978 C7orf43Q8WVR3 580 aa9.31□□□□□ -0.92
EFCAB13-213ENST00000523978 GLMNQ92990 594 aa9.31□□□□□ -0.92
EFCAB13-213ENST00000523978 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
EFCAB13-213ENST00000523978 SPOCK3Q9BQ16 436 aa9.31□□□□□ -0.92
EFCAB13-213ENST00000523978 PODXL2Q9NZ53 605 aa9.31□□□□□ -0.92
EFCAB13-213ENST00000523978 LOC100996750A0A140TA64 210 aa9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 MSTNO14793 375 aa9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 DGKGP49619 791 aa9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 PCBP4P57723 403 aaKnown RBP9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 LARGE2Q8N3Y3 721 aa9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 KRTAP4-6Q9BYQ5 205 aa9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 SUV39H2Q9H5I1 410 aa9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 AVENQ9NQS1 362 aaPredicted RBP9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 MARK1Q9P0L2 795 aa9.3□□□□□ -0.92
EFCAB13-213ENST00000523978 KRBA1A5PL33 1030 aa9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 PALM3A6NDB9 673 aaPredicted RBP9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 SFI1A8K8P3 1242 aa9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 PROCP04070 461 aa9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 PSMA6P60900 246 aaKnown RBP9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 ZNF468Q5VIY5 522 aaPredicted RBP9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 SIX5Q8N196 739 aa9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 TSEN2Q8NCE0 465 aaKnown RBP9.29□□□□□ -0.92
EFCAB13-213ENST00000523978 M0R2N6 131 aa9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 DKK1O94907 266 aa9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 LAMC2Q13753 1193 aa9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 GRIN2CQ14957 1233 aa9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 CHSY3Q70JA7 882 aa9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 RHPN1Q8TCX5 695 aa9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 TFIP11Q9UBB9 837 aaKnown RBP9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 PRR12Q9ULL5 1215 aa9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 GPC6Q9Y625 555 aaPredicted RBP9.28□□□□□ -0.92
EFCAB13-213ENST00000523978 MAFBQ9Y5Q3 323 aaPredicted RBP9.27□□□□□ -0.93
EFCAB13-213ENST00000523978 GNB5O14775 395 aa9.26□□□□□ -0.93
EFCAB13-213ENST00000523978 HIRAP54198 1017 aaPredicted RBP9.26□□□□□ -0.93
EFCAB13-213ENST00000523978 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
EFCAB13-213ENST00000523978 PHACTR1Q9C0D0 580 aa9.26□□□□□ -0.93
EFCAB13-213ENST00000523978 NEUROD4Q9HD90 331 aa9.26□□□□□ -0.93
EFCAB13-213ENST00000523978 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
EFCAB13-213ENST00000523978 SFSWAPQ12872 951 aaKnown RBP9.25□□□□□ -0.93
EFCAB13-213ENST00000523978 ALYREFQ86V81 257 aaKnown RBP9.25□□□□□ -0.93
EFCAB13-213ENST00000523978 HSH2DQ96JZ2 352 aa9.25□□□□□ -0.93
EFCAB13-213ENST00000523978 CHMP3Q9Y3E7 222 aa9.25□□□□□ -0.93
EFCAB13-213ENST00000523978 C21orf2O43822 256 aa9.24□□□□□ -0.93
EFCAB13-213ENST00000523978 PPP1R12BO60237 982 aaPredicted RBP9.24□□□□□ -0.93
EFCAB13-213ENST00000523978 RASA1P20936 1047 aa9.24□□□□□ -0.93
EFCAB13-213ENST00000523978 C1orf53Q5VUE5 145 aa9.24□□□□□ -0.93
EFCAB13-213ENST00000523978 SYT9Q86SS6 491 aa9.24□□□□□ -0.93
EFCAB13-213ENST00000523978 RBM19Q9Y4C8 960 aaKnown RBP9.24□□□□□ -0.93
EFCAB13-213ENST00000523978 PIK3R2O00459 728 aa9.23□□□□□ -0.93
EFCAB13-213ENST00000523978 SLC30A3Q99726 388 aa9.23□□□□□ -0.93
EFCAB13-213ENST00000523978 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
EFCAB13-213ENST00000523978 MDFIQ99750 246 aa9.22□□□□□ -0.93
EFCAB13-213ENST00000523978 A6NJR5 290 aa9.21□□□□□ -0.94
EFCAB13-213ENST00000523978 SEC13P55735 322 aa9.21□□□□□ -0.94
EFCAB13-213ENST00000523978 CALR3Q96L12 384 aaKnown RBP9.21□□□□□ -0.94
EFCAB13-213ENST00000523978 PPP1R12CQ9BZL4 782 aa9.21□□□□□ -0.94
EFCAB13-213ENST00000523978 BRD7Q9NPI1 651 aa9.21□□□□□ -0.94
EFCAB13-213ENST00000523978 ELOA3CA0A087WX78 387 aaPredicted RBP9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 ELOA3DA6NLF2 546 aaPredicted RBP9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 ELOA3BQ3SY89 546 aa9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 CRTC2Q53ET0 693 aaPredicted RBP9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 ELOA3Q8NG57 546 aa9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 NOP53Q9NZM5 478 aaKnown RBP9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 ATAD2Q6PL18 1390 aa9.2□□□□□ -0.94
EFCAB13-213ENST00000523978 SIN3BO75182 1162 aa9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 TYRO3Q06418 890 aa9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 SPEM2Q0P670 501 aa9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 KANK4Q5T7N3 995 aaPredicted RBP9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 LARP1Q6PKG0 1096 aaKnown RBP9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 RAB44Q7Z6P3 723 aaPredicted RBP9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 ALDH16A1Q8IZ83 802 aa9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 TRIM11Q96F44 468 aa9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 C2orf49Q9BVC5 232 aaPredicted RBP9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 ANKIB1Q9P2G1 1089 aa9.19□□□□□ -0.94
EFCAB13-213ENST00000523978 ADAM23O75077 832 aa9.18□□□□□ -0.94
EFCAB13-213ENST00000523978 LGR5O75473 907 aa9.18□□□□□ -0.94
EFCAB13-213ENST00000523978 PTK7Q13308 1070 aa9.18□□□□□ -0.94
EFCAB13-213ENST00000523978 STAG2Q8N3U4 1231 aa9.18□□□□□ -0.94
EFCAB13-213ENST00000523978 CHMP7Q8WUX9 453 aaPredicted RBP9.18□□□□□ -0.94
EFCAB13-213ENST00000523978 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
EFCAB13-213ENST00000523978 ADARB2-AS1A8MUL3 147 aa9.17□□□□□ -0.94
EFCAB13-213ENST00000523978 BAG6P46379 1132 aa9.17□□□□□ -0.94
EFCAB13-213ENST00000523978 KCNQ4P56696 695 aa9.17□□□□□ -0.94
EFCAB13-213ENST00000523978 DPYDQ12882 1025 aa9.17□□□□□ -0.94
EFCAB13-213ENST00000523978 NPM2Q86SE8 214 aaKnown RBP9.17□□□□□ -0.94
EFCAB13-213ENST00000523978 C1QTNF9BB2RNN3 333 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L10C9JJH3 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L21D6R901 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
EFCAB13-213ENST00000523978 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms