RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 PLEKHG3A1L390 1219 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 S100BP04271 92 aaPredicted RBP7.77□□□□□ -1.17
SDC2-208ENST00000523877 MSL3P1P0C860 447 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 STIP1P31948 543 aaKnown RBP7.77□□□□□ -1.17
SDC2-208ENST00000523877 SH3BGRP55822 239 aaPredicted RBP7.77□□□□□ -1.17
SDC2-208ENST00000523877 IRX1P78414 480 aaPredicted RBP7.77□□□□□ -1.17
SDC2-208ENST00000523877 ALDH1L2Q3SY69 923 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 RNF187Q5TA31 235 aaPredicted RBP7.77□□□□□ -1.17
SDC2-208ENST00000523877 CADPS2Q86UW7 1296 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 CCDC191Q8NCU4 936 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 FRAT1Q92837 279 aaPredicted RBP7.77□□□□□ -1.17
SDC2-208ENST00000523877 POM121Q96HA1 1249 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 CASS4Q9NQ75 786 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 TMEM63CQ9P1W3 806 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 ZNF232Q9UNY5 417 aa7.77□□□□□ -1.17
SDC2-208ENST00000523877 SMARCA2P51531 1590 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 VAMP4O75379 141 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 RBM5P52756 815 aaKnown RBP eCLIP7.76□□□□□ -1.17
SDC2-208ENST00000523877 CCDC15Q0P6D6 951 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 TRAF1Q13077 416 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 PHC3Q8NDX5 983 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 TMC1Q8TDI8 760 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 FRS2Q8WU20 508 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 DDX27Q96GQ7 796 aaKnown RBP7.76□□□□□ -1.17
SDC2-208ENST00000523877 CDHR1Q96JP9 859 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 TTC14Q96N46 770 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 GBP4Q96PP9 640 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 MMTAG2Q9BU76 263 aaKnown RBP7.76□□□□□ -1.17
SDC2-208ENST00000523877 ALDH8A1Q9H2A2 487 aaPredicted RBP7.76□□□□□ -1.17
SDC2-208ENST00000523877 VEZTQ9HBM0 779 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 MAFFQ9ULX9 164 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 LHX6Q9UPM6 363 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 AXIN2Q9Y2T1 843 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 ARHGEF11O15085 1522 aa7.76□□□□□ -1.17
SDC2-208ENST00000523877 WDR62O43379 1518 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 FGAP02671 866 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 XBP1P17861 261 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 TTC39BQ5VTQ0 682 aaPredicted RBP7.75□□□□□ -1.17
SDC2-208ENST00000523877 NLRP13Q86W25 1043 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 NGDNQ8NEJ9 315 aaKnown RBP7.75□□□□□ -1.17
SDC2-208ENST00000523877 PPM1EQ8WY54 764 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 TBC1D2Q9BYX2 928 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 TSPY26PQ9H489 355 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 COL4A3BPQ9Y5P4 624 aa7.75□□□□□ -1.17
SDC2-208ENST00000523877 SEMA3EO15041 775 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 LMNB1P20700 586 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 SRPK2P78362 688 aaKnown RBP7.74□□□□□ -1.17
SDC2-208ENST00000523877 GABPB1Q06547 395 aaPredicted RBP7.74□□□□□ -1.17
SDC2-208ENST00000523877 UBE4AQ14139 1066 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 FAM161AQ3B820 660 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 NUTM2GQ5VZR2 741 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 WWC2Q6AWC2 1192 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 SKAP1Q86WV1 359 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 STK11IPQ8N1F8 1099 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 TMC2Q8TDI7 906 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 GIPC2Q8TF65 315 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 ATRIPQ8WXE1 791 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 CENPTQ96BT3 561 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 TRIM6Q9C030 488 aaPredicted RBP7.74□□□□□ -1.17
SDC2-208ENST00000523877 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 TMOD4Q9NZQ9 345 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 LZTS1Q9Y250 596 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 PCDHGA4Q9Y5G9 962 aa7.74□□□□□ -1.17
SDC2-208ENST00000523877 PDS5BQ9NTI5 1447 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 DYTNA2CJ06 578 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 TMEM110-MUSTN1A8MSY1 372 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 TBC1D12O60347 775 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 LDHAP00338 332 aaKnown RBP7.73□□□□□ -1.17
SDC2-208ENST00000523877 OATP04181 439 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 EIF2B5Q13144 721 aaKnown RBP7.73□□□□□ -1.17
SDC2-208ENST00000523877 SEPT7Q16181 437 aaKnown RBP7.73□□□□□ -1.17
SDC2-208ENST00000523877 PDCD2Q16342 344 aaPredicted RBP7.73□□□□□ -1.17
SDC2-208ENST00000523877 CCDC144BQ3MJ40 725 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 SMYD5Q6GMV2 418 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 KIAA1211Q6ZU35 1233 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 RELL1Q8IUW5 271 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 ELOA2Q8IYF1 753 aaPredicted RBP7.73□□□□□ -1.17
SDC2-208ENST00000523877 MYOCDQ8IZQ8 938 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 STAG2Q8N3U4 1231 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 TAF4BQ92750 862 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 VMP1Q96GC9 406 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 DHX36Q9H2U1 1008 aaKnown RBP7.73□□□□□ -1.17
SDC2-208ENST00000523877 HOXC10Q9NYD6 342 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 ZNF330Q9Y3S2 320 aaPredicted RBP7.73□□□□□ -1.17
SDC2-208ENST00000523877 TBX22Q9Y458 520 aa7.73□□□□□ -1.17
SDC2-208ENST00000523877 KINO60870 393 aaKnown RBP7.72□□□□□ -1.17
SDC2-208ENST00000523877 KIAA0754O94854 1291 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 SLC34A2O95436 690 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 FOSP01100 380 aaPredicted RBP7.72□□□□□ -1.17
SDC2-208ENST00000523877 FAM163BP0C2L3 166 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 PIK3CAP42336 1068 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 USP5P45974 858 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 NOP2P46087 812 aaKnown RBP7.72□□□□□ -1.17
SDC2-208ENST00000523877 SEPT2Q15019 361 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 ZNF771Q7L3S4 317 aaPredicted RBP7.72□□□□□ -1.17
SDC2-208ENST00000523877 WAPLQ7Z5K2 1190 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 TRIM74Q86UV6 250 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 TRIM73Q86UV7 250 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms