RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NRXN2Q9P2S2 1712 aa16.58■□□□□ 0.24
VEGFA-224ENST00000523873 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-224ENST00000523873 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
VEGFA-224ENST00000523873 AIMP1Q12904 312 aaKnown RBP16.57■□□□□ 0.24
VEGFA-224ENST00000523873 NFIXQ14938 502 aa16.57■□□□□ 0.24
VEGFA-224ENST00000523873 HLFQ16534 295 aa16.57■□□□□ 0.24
VEGFA-224ENST00000523873 TBC1D9BQ66K14 1250 aa16.57■□□□□ 0.24
VEGFA-224ENST00000523873 ZBTB3Q9H5J0 574 aa16.57■□□□□ 0.24
VEGFA-224ENST00000523873 DDX21Q9NR30 783 aaKnown RBP eCLIP16.57■□□□□ 0.24
VEGFA-224ENST00000523873 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
VEGFA-224ENST00000523873 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
VEGFA-224ENST00000523873 XAGE3Q8WTP9 111 aa16.56■□□□□ 0.24
VEGFA-224ENST00000523873 FHDC1Q9C0D6 1143 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-224ENST00000523873 MAP3K15Q6ZN16 1313 aa16.55■□□□□ 0.24
VEGFA-224ENST00000523873 E9PSI1 815 aa16.55■□□□□ 0.24
VEGFA-224ENST00000523873 VAMP4O75379 141 aa16.55■□□□□ 0.24
VEGFA-224ENST00000523873 TM4SF1P30408 202 aa16.55■□□□□ 0.24
VEGFA-224ENST00000523873 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
VEGFA-224ENST00000523873 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
VEGFA-224ENST00000523873 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
VEGFA-224ENST00000523873 POLRMTO00411 1230 aaKnown RBP16.54■□□□□ 0.24
VEGFA-224ENST00000523873 CCDC30Q5VVM6 783 aa16.54■□□□□ 0.24
VEGFA-224ENST00000523873 PHAXQ9H814 394 aaKnown RBP16.54■□□□□ 0.24
VEGFA-224ENST00000523873 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
VEGFA-224ENST00000523873 CACNA1SQ13698 1873 aa16.52■□□□□ 0.24
VEGFA-224ENST00000523873 SYT17Q9BSW7 474 aa16.52■□□□□ 0.24
VEGFA-224ENST00000523873 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
VEGFA-224ENST00000523873 BRCA1P38398 1863 aaKnown RBP16.51■□□□□ 0.23
VEGFA-224ENST00000523873 SERPINB2P05120 415 aa16.51■□□□□ 0.23
VEGFA-224ENST00000523873 G2E3Q7L622 706 aa16.51■□□□□ 0.23
VEGFA-224ENST00000523873 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
VEGFA-224ENST00000523873 CCDC24Q8N4L8 307 aa16.51■□□□□ 0.23
VEGFA-224ENST00000523873 NLGN2Q8NFZ4 835 aa16.51■□□□□ 0.23
VEGFA-224ENST00000523873 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
VEGFA-224ENST00000523873 C10orf71Q711Q0 1435 aa16.51■□□□□ 0.23
VEGFA-224ENST00000523873 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
VEGFA-224ENST00000523873 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
VEGFA-224ENST00000523873 ERVV-1B6SEH8 477 aa16.5■□□□□ 0.23
VEGFA-224ENST00000523873 GPTP24298 496 aa16.5■□□□□ 0.23
VEGFA-224ENST00000523873 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
VEGFA-224ENST00000523873 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
VEGFA-224ENST00000523873 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
VEGFA-224ENST00000523873 CLEC4GQ6UXB4 293 aa16.49■□□□□ 0.23
VEGFA-224ENST00000523873 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
VEGFA-224ENST00000523873 ZNF428Q96B54 188 aa16.49■□□□□ 0.23
VEGFA-224ENST00000523873 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
VEGFA-224ENST00000523873 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
VEGFA-224ENST00000523873 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
VEGFA-224ENST00000523873 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
VEGFA-224ENST00000523873 ATP10DQ9P241 1426 aa16.48■□□□□ 0.23
VEGFA-224ENST00000523873 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
VEGFA-224ENST00000523873 TNRC6CQ9HCJ0 1690 aaKnown RBP16.48■□□□□ 0.23
VEGFA-224ENST00000523873 LAMB2P55268 1798 aa16.47■□□□□ 0.23
VEGFA-224ENST00000523873 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
VEGFA-224ENST00000523873 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
VEGFA-224ENST00000523873 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
VEGFA-224ENST00000523873 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
VEGFA-224ENST00000523873 ZNF34Q8IZ26 560 aa16.46■□□□□ 0.23
VEGFA-224ENST00000523873 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
VEGFA-224ENST00000523873 PXDNLA1KZ92 1463 aa16.46■□□□□ 0.23
VEGFA-224ENST00000523873 RGL2O15211 777 aa16.45■□□□□ 0.22
VEGFA-224ENST00000523873 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
VEGFA-224ENST00000523873 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
VEGFA-224ENST00000523873 NBPF5PQ86XG9 351 aaPredicted RBP16.45■□□□□ 0.22
VEGFA-224ENST00000523873 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
VEGFA-224ENST00000523873 CHMP4AQ9BY43 222 aa16.45■□□□□ 0.22
VEGFA-224ENST00000523873 DDX60Q8IY21 1712 aaKnown RBP16.45■□□□□ 0.22
VEGFA-224ENST00000523873 ADCY9O60503 1353 aa16.44■□□□□ 0.22
VEGFA-224ENST00000523873 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
VEGFA-224ENST00000523873 NPHP1O15259 732 aa16.44■□□□□ 0.22
VEGFA-224ENST00000523873 FLIIQ13045 1269 aa16.44■□□□□ 0.22
VEGFA-224ENST00000523873 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
VEGFA-224ENST00000523873 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
VEGFA-224ENST00000523873 CNBD1Q8NA66 436 aa16.44■□□□□ 0.22
VEGFA-224ENST00000523873 A0A0G2JLW4 131 aa16.43■□□□□ 0.22
VEGFA-224ENST00000523873 DPEP1P16444 411 aa16.43■□□□□ 0.22
VEGFA-224ENST00000523873 CHRNA5P30532 468 aa16.43■□□□□ 0.22
VEGFA-224ENST00000523873 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
VEGFA-224ENST00000523873 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
VEGFA-224ENST00000523873 MYD88Q99836 296 aa16.43■□□□□ 0.22
VEGFA-224ENST00000523873 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
VEGFA-224ENST00000523873 TAF1P21675 1872 aa16.42■□□□□ 0.22
VEGFA-224ENST00000523873 ABCC12Q96J65 1359 aa16.42■□□□□ 0.22
VEGFA-224ENST00000523873 PI4KAP2A4QPH2 592 aa16.42■□□□□ 0.22
VEGFA-224ENST00000523873 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
VEGFA-224ENST00000523873 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
VEGFA-224ENST00000523873 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
VEGFA-224ENST00000523873 MRPL50Q8N5N7 158 aaKnown RBP16.42■□□□□ 0.22
VEGFA-224ENST00000523873 PI4KAP1Q8N8J0 262 aa16.42■□□□□ 0.22
VEGFA-224ENST00000523873 ARFGEF1Q9Y6D6 1849 aa16.42■□□□□ 0.22
VEGFA-224ENST00000523873 NTSR2O95665 410 aa16.41■□□□□ 0.22
VEGFA-224ENST00000523873 DDX58O95786 925 aaKnown RBP16.41■□□□□ 0.22
VEGFA-224ENST00000523873 ST5P78524 1137 aa16.41■□□□□ 0.22
VEGFA-224ENST00000523873 FKBP5Q13451 457 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-224ENST00000523873 ERFEQ4G0M1 354 aa16.41■□□□□ 0.22
VEGFA-224ENST00000523873 KSR2Q6VAB6 950 aa16.41■□□□□ 0.22
VEGFA-224ENST00000523873 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
VEGFA-224ENST00000523873 F6X3S4 739 aa16.4■□□□□ 0.22
VEGFA-224ENST00000523873 PARP10Q53GL7 1025 aa16.4■□□□□ 0.22
VEGFA-224ENST00000523873 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms