RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
TNPO1-213ENST00000523768 RUFY2Q8WXA3 655 aa13.68□□□□□ -0.22
TNPO1-213ENST00000523768 GPATCH3Q96I76 525 aa13.68□□□□□ -0.22
TNPO1-213ENST00000523768 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
TNPO1-213ENST00000523768 KAZALD1Q96I82 304 aa13.68□□□□□ -0.22
TNPO1-213ENST00000523768 PLEKHG2Q9H7P9 1386 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 ABCC6O95255 1503 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 MBD3O95983 291 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 CWC27Q6UX04 472 aaKnown RBP13.67□□□□□ -0.22
TNPO1-213ENST00000523768 NOL8Q76FK4 1167 aaKnown RBP13.67□□□□□ -0.22
TNPO1-213ENST00000523768 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 SUCLG2Q96I99 432 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.225e-7■■■□□ 16.5
TNPO1-213ENST00000523768 PA2G4Q9UQ80 394 aaKnown RBP13.67□□□□□ -0.22
TNPO1-213ENST00000523768 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 ESPNB1AK53 854 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 IFIT2P09913 472 aaKnown RBP13.67□□□□□ -0.22
TNPO1-213ENST00000523768 TRIM44Q96DX7 344 aaPredicted RBP13.67□□□□□ -0.22
TNPO1-213ENST00000523768 ANO8Q9HCE9 1232 aaPredicted RBP13.67□□□□□ -0.22
TNPO1-213ENST00000523768 SCN11AQ9UI33 1791 aa13.67□□□□□ -0.22
TNPO1-213ENST00000523768 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
TNPO1-213ENST00000523768 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
TNPO1-213ENST00000523768 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
TNPO1-213ENST00000523768 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
TNPO1-213ENST00000523768 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
TNPO1-213ENST00000523768 KCNB2Q92953 911 aa13.66□□□□□ -0.22
TNPO1-213ENST00000523768 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
TNPO1-213ENST00000523768 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
TNPO1-213ENST00000523768 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
TNPO1-213ENST00000523768 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
TNPO1-213ENST00000523768 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
TNPO1-213ENST00000523768 PHKG2P15735 406 aa13.65□□□□□ -0.22
TNPO1-213ENST00000523768 FOXD4L5Q5VV16 416 aaPredicted RBP13.65□□□□□ -0.22
TNPO1-213ENST00000523768 FOXD4L4Q8WXT5 416 aaPredicted RBP13.65□□□□□ -0.22
TNPO1-213ENST00000523768 ANP32BQ92688 251 aaKnown RBP13.65□□□□□ -0.22
TNPO1-213ENST00000523768 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
TNPO1-213ENST00000523768 SASH1O94885 1247 aa13.65□□□□□ -0.22
TNPO1-213ENST00000523768 TATP17735 454 aaPredicted RBP13.65□□□□□ -0.22
TNPO1-213ENST00000523768 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
TNPO1-213ENST00000523768 AIMP1Q12904 312 aaKnown RBP13.64□□□□□ -0.23
TNPO1-213ENST00000523768 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.239e-7■□□□□ 8
TNPO1-213ENST00000523768 AACSQ86V21 672 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
TNPO1-213ENST00000523768 LIMCH1Q9UPQ0 1083 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 C5P01031 1676 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 AK2P54819 239 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 SLC39A6Q13433 755 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 LRSAM1Q6UWE0 723 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 NLRP2Q9NX02 1062 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 COL18A1P39060 1754 aa13.64□□□□□ -0.23
TNPO1-213ENST00000523768 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
TNPO1-213ENST00000523768 RUFY3Q7L099 469 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 NSFL1CQ9UNZ2 370 aaKnown RBP13.63□□□□□ -0.23
TNPO1-213ENST00000523768 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 NEURL1BA8MQ27 555 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 HIP1O00291 1037 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 PTH1RQ03431 593 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 IFNL2Q8IZJ0 200 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 EAF2Q96CJ1 260 aaPredicted RBP13.63□□□□□ -0.23
TNPO1-213ENST00000523768 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
TNPO1-213ENST00000523768 SNRKQ9NRH2 765 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 DCCP43146 1447 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 MRC1P22897 1456 aa13.63□□□□□ -0.23
TNPO1-213ENST00000523768 MEGF6O75095 1541 aa13.62□□□□□ -0.23
TNPO1-213ENST00000523768 NFATC2IPQ8NCF5 419 aa13.62□□□□□ -0.23
TNPO1-213ENST00000523768 RPAP1Q9BWH6 1393 aaPredicted RBP13.62□□□□□ -0.23
TNPO1-213ENST00000523768 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.62□□□□□ -0.23
TNPO1-213ENST00000523768 GCKRQ14397 625 aa13.62□□□□□ -0.23
TNPO1-213ENST00000523768 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
TNPO1-213ENST00000523768 VPS53Q5VIR6 699 aa13.62□□□□□ -0.23
TNPO1-213ENST00000523768 LRP10Q7Z4F1 713 aa13.62□□□□□ -0.23
TNPO1-213ENST00000523768 ATF3P18847 181 aa13.61□□□□□ -0.23
TNPO1-213ENST00000523768 XAGE3Q8WTP9 111 aa13.61□□□□□ -0.23
TNPO1-213ENST00000523768 ZNF496Q96IT1 587 aaPredicted RBP13.61□□□□□ -0.23
TNPO1-213ENST00000523768 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
TNPO1-213ENST00000523768 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.61□□□□□ -0.23
TNPO1-213ENST00000523768 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
TNPO1-213ENST00000523768 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
TNPO1-213ENST00000523768 CASTP20810 708 aaKnown RBP13.61□□□□□ -0.23
TNPO1-213ENST00000523768 COPS6Q7L5N1 327 aa13.61□□□□□ -0.23
TNPO1-213ENST00000523768 TMEM87AQ8NBN3 555 aa13.61□□□□□ -0.23
TNPO1-213ENST00000523768 DCAF5Q96JK2 942 aa13.61□□□□□ -0.23
TNPO1-213ENST00000523768 SNRPA1P09661 255 aaKnown RBP13.6□□□□□ -0.23
TNPO1-213ENST00000523768 MYL6BP14649 208 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 COL15A1P39059 1388 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 MAP4K1Q92918 833 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 SYAP1Q96A49 352 aaPredicted RBP13.6□□□□□ -0.23
TNPO1-213ENST00000523768 PDLIM2Q96JY6 352 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
TNPO1-213ENST00000523768 CCDC8Q9H0W5 538 aaPredicted RBP13.6□□□□□ -0.23
TNPO1-213ENST00000523768 SYCE3A1L190 88 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 ZSCAN22P10073 491 aaPredicted RBP13.6□□□□□ -0.23
TNPO1-213ENST00000523768 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
TNPO1-213ENST00000523768 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
TNPO1-213ENST00000523768 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms