RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
PABPC1-222ENST00000523555 TNRC6CQ9HCJ0 1690 aaKnown RBP12.47□□□□□ -0.41
PABPC1-222ENST00000523555 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
PABPC1-222ENST00000523555 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
PABPC1-222ENST00000523555 SBF1O95248 1867 aa12.46□□□□□ -0.42
PABPC1-222ENST00000523555 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
PABPC1-222ENST00000523555 PRR5LQ6MZQ0 368 aa12.45□□□□□ -0.42
PABPC1-222ENST00000523555 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
PABPC1-222ENST00000523555 BCS1LQ9Y276 419 aa12.45□□□□□ -0.42
PABPC1-222ENST00000523555 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
PABPC1-222ENST00000523555 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
PABPC1-222ENST00000523555 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
PABPC1-222ENST00000523555 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
PABPC1-222ENST00000523555 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
PABPC1-222ENST00000523555 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
PABPC1-222ENST00000523555 SETDB2Q96T68 719 aa12.43□□□□□ -0.42
PABPC1-222ENST00000523555 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
PABPC1-222ENST00000523555 CLEC4GQ6UXB4 293 aa12.42□□□□□ -0.42
PABPC1-222ENST00000523555 FAM9BQ8IZU0 186 aa12.42□□□□□ -0.42
PABPC1-222ENST00000523555 ZNF784Q8NCA9 323 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-222ENST00000523555 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
PABPC1-222ENST00000523555 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
PABPC1-222ENST00000523555 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-222ENST00000523555 LAMB2P55268 1798 aa12.42□□□□□ -0.42
PABPC1-222ENST00000523555 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 UBN2Q6ZU65 1347 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-222ENST00000523555 DUSP27Q5VZP5 1158 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
PABPC1-222ENST00000523555 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 ZNF652Q9Y2D9 606 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
PABPC1-222ENST00000523555 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 ATP10DQ9P241 1426 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 GPTP24298 496 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 GNAI1P63096 354 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 ADCY9O60503 1353 aa12.4□□□□□ -0.42
PABPC1-222ENST00000523555 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
PABPC1-222ENST00000523555 AIMP1Q12904 312 aaKnown RBP12.39□□□□□ -0.43
PABPC1-222ENST00000523555 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
PABPC1-222ENST00000523555 DALRD3Q5D0E6 543 aaKnown RBP12.39□□□□□ -0.43
PABPC1-222ENST00000523555 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
PABPC1-222ENST00000523555 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-222ENST00000523555 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
PABPC1-222ENST00000523555 BRIP1Q9BX63 1249 aa12.39□□□□□ -0.43
PABPC1-222ENST00000523555 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
PABPC1-222ENST00000523555 TAF1P21675 1872 aa12.38□□□□□ -0.43
PABPC1-222ENST00000523555 RGL2O15211 777 aa12.38□□□□□ -0.43
PABPC1-222ENST00000523555 SUSD4Q5VX71 490 aa12.38□□□□□ -0.43
PABPC1-222ENST00000523555 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
PABPC1-222ENST00000523555 ARHGAP27Q6ZUM4 889 aa12.38□□□□□ -0.43
PABPC1-222ENST00000523555 ZNF34Q8IZ26 560 aa12.38□□□□□ -0.43
PABPC1-222ENST00000523555 ZNF428Q96B54 188 aa12.38□□□□□ -0.43
PABPC1-222ENST00000523555 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-222ENST00000523555 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
PABPC1-222ENST00000523555 H0YIN7 160 aa12.37□□□□□ -0.43
PABPC1-222ENST00000523555 NPHP1O15259 732 aa12.37□□□□□ -0.43
PABPC1-222ENST00000523555 HOXB7P09629 217 aa12.37□□□□□ -0.43
PABPC1-222ENST00000523555 PRELPP51888 382 aa12.37□□□□□ -0.43
PABPC1-222ENST00000523555 ST5P78524 1137 aa12.37□□□□□ -0.43
PABPC1-222ENST00000523555 RASSF7Q02833 373 aa12.37□□□□□ -0.43
PABPC1-222ENST00000523555 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
PABPC1-222ENST00000523555 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
PABPC1-222ENST00000523555 NTSR2O95665 410 aa12.36□□□□□ -0.43
PABPC1-222ENST00000523555 SRGNP10124 158 aa12.36□□□□□ -0.43
PABPC1-222ENST00000523555 PDE6BP35913 854 aa12.36□□□□□ -0.43
PABPC1-222ENST00000523555 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
PABPC1-222ENST00000523555 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
PABPC1-222ENST00000523555 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
PABPC1-222ENST00000523555 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
PABPC1-222ENST00000523555 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-222ENST00000523555 DICER1Q9UPY3 1922 aaKnown RBP12.36□□□□□ -0.43
PABPC1-222ENST00000523555 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
PABPC1-222ENST00000523555 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
PABPC1-222ENST00000523555 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
PABPC1-222ENST00000523555 TTLL6Q8N841 843 aa12.35□□□□□ -0.43
PABPC1-222ENST00000523555 DBF4Q9UBU7 674 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-222ENST00000523555 FANCIQ9NVI1 1328 aa12.35□□□□□ -0.43
PABPC1-222ENST00000523555 KLRG2A4D1S0 409 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-222ENST00000523555 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
PABPC1-222ENST00000523555 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-222ENST00000523555 CACNA1FO60840 1977 aa12.34□□□□□ -0.43
PABPC1-222ENST00000523555 IL16Q14005 1332 aa12.34□□□□□ -0.43
PABPC1-222ENST00000523555 IBTKQ9P2D0 1353 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-222ENST00000523555 COL4A1P02462 1669 aa12.33□□□□□ -0.44
PABPC1-222ENST00000523555 NFKBIEO00221 500 aa12.33□□□□□ -0.44
PABPC1-222ENST00000523555 C21orf2O43822 256 aa12.33□□□□□ -0.44
PABPC1-222ENST00000523555 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
PABPC1-222ENST00000523555 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.44
PABPC1-222ENST00000523555 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
PABPC1-222ENST00000523555 NLRP10Q86W26 655 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms