RNA–Protein interactions for RNA: ENST00000523545.1

PPP1R42-213, Transcript of protein phosphatase 1 regulatory subunit 42, humanhuman

TSL 3

Gene PPP1R42, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R42-213ENST00000523545 ITPK1Q13572 414 aa16.56■□□□□ 0.24
PPP1R42-213ENST00000523545 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
PPP1R42-213ENST00000523545 NLGN1Q8N2Q7 840 aa16.55■□□□□ 0.24
PPP1R42-213ENST00000523545 FAM163AQ96GL9 167 aaPredicted RBP16.55■□□□□ 0.24
PPP1R42-213ENST00000523545 ASAP1Q9ULH1 1129 aa16.55■□□□□ 0.24
PPP1R42-213ENST00000523545 RTCBQ9Y3I0 505 aaKnown RBP16.55■□□□□ 0.24
PPP1R42-213ENST00000523545 PPM1GO15355 546 aaPredicted RBP16.54■□□□□ 0.24
PPP1R42-213ENST00000523545 TOMM70O94826 608 aa16.54■□□□□ 0.24
PPP1R42-213ENST00000523545 EYA1Q99502 592 aa16.54■□□□□ 0.24
PPP1R42-213ENST00000523545 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
PPP1R42-213ENST00000523545 CNTNAP4Q9C0A0 1308 aa16.53■□□□□ 0.24
PPP1R42-213ENST00000523545 TRAPPC3LQ5T215 181 aa16.53■□□□□ 0.24
PPP1R42-213ENST00000523545 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
PPP1R42-213ENST00000523545 CARD14Q9BXL6 1004 aa16.53■□□□□ 0.24
PPP1R42-213ENST00000523545 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
PPP1R42-213ENST00000523545 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
PPP1R42-213ENST00000523545 HSP90AB1P08238 724 aaKnown RBP16.52■□□□□ 0.24
PPP1R42-213ENST00000523545 MLLT3P42568 568 aaPredicted RBP16.52■□□□□ 0.24
PPP1R42-213ENST00000523545 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
PPP1R42-213ENST00000523545 COL5A3P25940 1745 aaPredicted RBP16.52■□□□□ 0.24
PPP1R42-213ENST00000523545 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
PPP1R42-213ENST00000523545 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
PPP1R42-213ENST00000523545 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
PPP1R42-213ENST00000523545 PARP3Q9Y6F1 533 aa16.49■□□□□ 0.23
PPP1R42-213ENST00000523545 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
PPP1R42-213ENST00000523545 GYS1P13807 737 aa16.48■□□□□ 0.23
PPP1R42-213ENST00000523545 RFC4P35249 363 aa16.48■□□□□ 0.23
PPP1R42-213ENST00000523545 RBM46Q8TBY0 533 aaKnown RBP16.48■□□□□ 0.23
PPP1R42-213ENST00000523545 DDX12PQ92771 950 aa16.48■□□□□ 0.23
PPP1R42-213ENST00000523545 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
PPP1R42-213ENST00000523545 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
PPP1R42-213ENST00000523545 WDR90Q96KV7 1748 aa16.48■□□□□ 0.23
PPP1R42-213ENST00000523545 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
PPP1R42-213ENST00000523545 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
PPP1R42-213ENST00000523545 FCHSD2O94868 740 aa16.47■□□□□ 0.23
PPP1R42-213ENST00000523545 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
PPP1R42-213ENST00000523545 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
PPP1R42-213ENST00000523545 KDM6AO15550 1401 aaPredicted RBP16.46■□□□□ 0.23
PPP1R42-213ENST00000523545 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
PPP1R42-213ENST00000523545 DPEP1P16444 411 aa16.46■□□□□ 0.23
PPP1R42-213ENST00000523545 LCE2DQ5TA82 110 aaPredicted RBP16.46■□□□□ 0.23
PPP1R42-213ENST00000523545 SLC4A9Q96Q91 983 aa16.46■□□□□ 0.23
PPP1R42-213ENST00000523545 LHX6Q9UPM6 363 aa16.46■□□□□ 0.23
PPP1R42-213ENST00000523545 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
PPP1R42-213ENST00000523545 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
PPP1R42-213ENST00000523545 DNAJC5GQ8N7S2 189 aa16.45■□□□□ 0.22
PPP1R42-213ENST00000523545 NMRK2Q9NPI5 230 aa16.45■□□□□ 0.22
PPP1R42-213ENST00000523545 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
PPP1R42-213ENST00000523545 FSTL1Q12841 308 aa16.44■□□□□ 0.22
PPP1R42-213ENST00000523545 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
PPP1R42-213ENST00000523545 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
PPP1R42-213ENST00000523545 SMYD5Q6GMV2 418 aa16.44■□□□□ 0.22
PPP1R42-213ENST00000523545 TNRC6CQ9HCJ0 1690 aaKnown RBP16.43■□□□□ 0.22
PPP1R42-213ENST00000523545 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
PPP1R42-213ENST00000523545 PIM2Q9P1W9 311 aa16.43■□□□□ 0.22
PPP1R42-213ENST00000523545 USP42Q9H9J4 1324 aaKnown RBP16.43■□□□□ 0.22
PPP1R42-213ENST00000523545 ZC3H4Q9UPT8 1303 aaKnown RBP16.43■□□□□ 0.22
PPP1R42-213ENST00000523545 CABP4P57796 275 aa16.42■□□□□ 0.22
PPP1R42-213ENST00000523545 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
PPP1R42-213ENST00000523545 KCNA3P22001 575 aa16.41■□□□□ 0.22
PPP1R42-213ENST00000523545 FOSBP53539 338 aa16.41■□□□□ 0.22
PPP1R42-213ENST00000523545 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
PPP1R42-213ENST00000523545 MARVELD3Q96A59 401 aa16.41■□□□□ 0.22
PPP1R42-213ENST00000523545 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
PPP1R42-213ENST00000523545 TJP1Q07157 1748 aa16.4■□□□□ 0.22
PPP1R42-213ENST00000523545 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
PPP1R42-213ENST00000523545 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
PPP1R42-213ENST00000523545 TIMELESSQ9UNS1 1208 aa16.4■□□□□ 0.22
PPP1R42-213ENST00000523545 PCDHGA10Q9Y5H3 936 aa16.4■□□□□ 0.22
PPP1R42-213ENST00000523545 TULP1O00294 542 aaPredicted RBP16.39■□□□□ 0.21
PPP1R42-213ENST00000523545 CRKLP46109 303 aaKnown RBP16.39■□□□□ 0.21
PPP1R42-213ENST00000523545 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
PPP1R42-213ENST00000523545 OSBPP22059 807 aa16.38■□□□□ 0.21
PPP1R42-213ENST00000523545 MTHFSP49914 203 aa16.38■□□□□ 0.21
PPP1R42-213ENST00000523545 EMP3P54852 163 aa16.38■□□□□ 0.21
PPP1R42-213ENST00000523545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.38■□□□□ 0.21
PPP1R42-213ENST00000523545 ZNF454Q8N9F8 522 aa16.38■□□□□ 0.21
PPP1R42-213ENST00000523545 EPAS1Q99814 870 aa16.38■□□□□ 0.21
PPP1R42-213ENST00000523545 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
PPP1R42-213ENST00000523545 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
PPP1R42-213ENST00000523545 DDR1Q08345 913 aa16.37■□□□□ 0.21
PPP1R42-213ENST00000523545 ADAMTS7Q9UKP4 1686 aa16.37■□□□□ 0.21
PPP1R42-213ENST00000523545 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
PPP1R42-213ENST00000523545 SMC1BQ8NDV3 1235 aa16.36■□□□□ 0.21
PPP1R42-213ENST00000523545 MRC1P22897 1456 aa16.35■□□□□ 0.21
PPP1R42-213ENST00000523545 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
PPP1R42-213ENST00000523545 POLRMTO00411 1230 aaKnown RBP16.35■□□□□ 0.21
PPP1R42-213ENST00000523545 TYW1BQ6NUM6 668 aa16.35■□□□□ 0.21
PPP1R42-213ENST00000523545 SRP68Q9UHB9 627 aaKnown RBP16.35■□□□□ 0.21
PPP1R42-213ENST00000523545 ZPR1O75312 459 aa16.33■□□□□ 0.2
PPP1R42-213ENST00000523545 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.2
PPP1R42-213ENST00000523545 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
PPP1R42-213ENST00000523545 TM4SF1P30408 202 aa16.32■□□□□ 0.2
PPP1R42-213ENST00000523545 CHRNA5P30532 468 aa16.32■□□□□ 0.2
PPP1R42-213ENST00000523545 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
PPP1R42-213ENST00000523545 FBXW7Q969H0 707 aa16.32■□□□□ 0.2
PPP1R42-213ENST00000523545 ZDHHC16Q969W1 377 aa16.32■□□□□ 0.2
PPP1R42-213ENST00000523545 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
PPP1R42-213ENST00000523545 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
PPP1R42-213ENST00000523545 SCN11AQ9UI33 1791 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms