RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, humanhuman

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-210ENST00000523464 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
EBF1-210ENST00000523464 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
EBF1-210ENST00000523464 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
EBF1-210ENST00000523464 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
EBF1-210ENST00000523464 SRGNP10124 158 aa12.59□□□□□ -0.39
EBF1-210ENST00000523464 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
EBF1-210ENST00000523464 TAOK3Q9H2K8 898 aa12.59□□□□□ -0.39
EBF1-210ENST00000523464 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
EBF1-210ENST00000523464 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
EBF1-210ENST00000523464 PCNTO95613 3336 aa12.58□□□□□ -0.4
EBF1-210ENST00000523464 NPHP1O15259 732 aa12.58□□□□□ -0.4
EBF1-210ENST00000523464 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
EBF1-210ENST00000523464 SNRPA1P09661 255 aaKnown RBP12.58□□□□□ -0.4
EBF1-210ENST00000523464 PRELPP51888 382 aa12.58□□□□□ -0.4
EBF1-210ENST00000523464 SCN7AQ01118 1682 aa12.57□□□□□ -0.4
EBF1-210ENST00000523464 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
EBF1-210ENST00000523464 IQCA1LA6NCM1 817 aa12.57□□□□□ -0.4
EBF1-210ENST00000523464 POTECB2RU33 542 aa12.57□□□□□ -0.4
EBF1-210ENST00000523464 C21orf2O43822 256 aa12.57□□□□□ -0.4
EBF1-210ENST00000523464 TPTE2Q6XPS3 522 aa12.57□□□□□ -0.4
EBF1-210ENST00000523464 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
EBF1-210ENST00000523464 RTF1Q92541 710 aaKnown RBP12.57□□□□□ -0.4
EBF1-210ENST00000523464 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
EBF1-210ENST00000523464 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
EBF1-210ENST00000523464 A1BGP04217 495 aa12.56□□□□□ -0.4
EBF1-210ENST00000523464 NPR1P16066 1061 aa12.56□□□□□ -0.4
EBF1-210ENST00000523464 HTRA3P83110 453 aa12.56□□□□□ -0.4
EBF1-210ENST00000523464 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
EBF1-210ENST00000523464 RSPH6AQ9H0K4 717 aa12.56□□□□□ -0.4
EBF1-210ENST00000523464 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
EBF1-210ENST00000523464 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
EBF1-210ENST00000523464 COL13A1Q5TAT6 717 aaPredicted RBP12.55□□□□□ -0.4
EBF1-210ENST00000523464 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
EBF1-210ENST00000523464 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
EBF1-210ENST00000523464 RTKN2Q8IZC4 609 aa12.55□□□□□ -0.4
EBF1-210ENST00000523464 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
EBF1-210ENST00000523464 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
EBF1-210ENST00000523464 ZNF330Q9Y3S2 320 aaPredicted RBP12.55□□□□□ -0.4
EBF1-210ENST00000523464 ARFGEF2Q9Y6D5 1785 aa12.54□□□□□ -0.4
EBF1-210ENST00000523464 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
EBF1-210ENST00000523464 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
EBF1-210ENST00000523464 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
EBF1-210ENST00000523464 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
EBF1-210ENST00000523464 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
EBF1-210ENST00000523464 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
EBF1-210ENST00000523464 CC2D2BQ6DHV5 1058 aa12.53□□□□□ -0.4
EBF1-210ENST00000523464 LDHDQ86WU2 507 aa12.53□□□□□ -0.4
EBF1-210ENST00000523464 TNS4Q8IZW8 715 aa12.53□□□□□ -0.4
EBF1-210ENST00000523464 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
EBF1-210ENST00000523464 SCN4AP35499 1836 aa12.53□□□□□ -0.4
EBF1-210ENST00000523464 BCORQ6W2J9 1755 aa12.52□□□□□ -0.41
EBF1-210ENST00000523464 NEFMP07197 916 aa12.52□□□□□ -0.41
EBF1-210ENST00000523464 FKBP4Q02790 459 aaKnown RBP eCLIP12.52□□□□□ -0.41
EBF1-210ENST00000523464 SLX4Q8IY92 1834 aa12.52□□□□□ -0.41
EBF1-210ENST00000523464 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
EBF1-210ENST00000523464 HSPA1AP0DMV8 641 aaKnown RBP12.51□□□□□ -0.41
EBF1-210ENST00000523464 HSPA1BP0DMV9 641 aaKnown RBP12.51□□□□□ -0.41
EBF1-210ENST00000523464 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
EBF1-210ENST00000523464 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
EBF1-210ENST00000523464 PNMA8AQ86V59 439 aaPredicted RBP12.51□□□□□ -0.41
EBF1-210ENST00000523464 NYXQ9GZU5 481 aa12.51□□□□□ -0.41
EBF1-210ENST00000523464 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
EBF1-210ENST00000523464 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
EBF1-210ENST00000523464 KCNQ3O43525 872 aa12.5□□□□□ -0.41
EBF1-210ENST00000523464 CAPN15O75808 1086 aa12.5□□□□□ -0.41
EBF1-210ENST00000523464 DDNO94850 711 aaPredicted RBP12.5□□□□□ -0.41
EBF1-210ENST00000523464 PNNQ9H307 717 aaKnown RBP12.5□□□□□ -0.41
EBF1-210ENST00000523464 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
EBF1-210ENST00000523464 PASKQ96RG2 1323 aa12.49□□□□□ -0.41
EBF1-210ENST00000523464 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
EBF1-210ENST00000523464 PPP2R1AP30153 589 aa12.49□□□□□ -0.41
EBF1-210ENST00000523464 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
EBF1-210ENST00000523464 PSMD1Q99460 953 aa12.49□□□□□ -0.41
EBF1-210ENST00000523464 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
EBF1-210ENST00000523464 CRY2Q49AN0 593 aa12.48□□□□□ -0.41
EBF1-210ENST00000523464 NBPF10Q6P3W6 841 aaKnown RBP12.48□□□□□ -0.41
EBF1-210ENST00000523464 MCM10Q7L590 875 aa12.48□□□□□ -0.41
EBF1-210ENST00000523464 GPC2Q8N158 579 aa12.48□□□□□ -0.41
EBF1-210ENST00000523464 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
EBF1-210ENST00000523464 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
EBF1-210ENST00000523464 CNTNAP1P78357 1384 aa12.47□□□□□ -0.41
EBF1-210ENST00000523464 IBTKQ9P2D0 1353 aaPredicted RBP12.47□□□□□ -0.41
EBF1-210ENST00000523464 TMEM88BA6NKF7 163 aa12.47□□□□□ -0.41
EBF1-210ENST00000523464 FZD9O00144 591 aa12.47□□□□□ -0.41
EBF1-210ENST00000523464 JDP2Q8WYK2 163 aa12.47□□□□□ -0.41
EBF1-210ENST00000523464 VPS33BQ9H267 617 aa12.47□□□□□ -0.41
EBF1-210ENST00000523464 PRDM10Q9NQV6 1147 aa12.47□□□□□ -0.41
EBF1-210ENST00000523464 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
EBF1-210ENST00000523464 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
EBF1-210ENST00000523464 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.41
EBF1-210ENST00000523464 HOXA10P31260 410 aaPredicted RBP12.46□□□□□ -0.41
EBF1-210ENST00000523464 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
EBF1-210ENST00000523464 CACNA1SQ13698 1873 aa12.45□□□□□ -0.42
EBF1-210ENST00000523464 EPHX2P34913 555 aa12.45□□□□□ -0.42
EBF1-210ENST00000523464 KIF6Q6ZMV9 814 aa12.45□□□□□ -0.42
EBF1-210ENST00000523464 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
EBF1-210ENST00000523464 MAP3K15Q6ZN16 1313 aa12.44□□□□□ -0.42
EBF1-210ENST00000523464 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
EBF1-210ENST00000523464 AIDAQ96BJ3 306 aa12.44□□□□□ -0.42
EBF1-210ENST00000523464 CRAMP1Q96RY5 1269 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms