RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 J3QL48 77 aa8.92□□□□□ -0.98
CSMD1-211ENST00000523062 FMNL1O95466 1100 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-211ENST00000523062 IL13P35225 146 aa8.92□□□□□ -0.98
CSMD1-211ENST00000523062 RRS1Q15050 365 aaKnown RBP8.92□□□□□ -0.98
CSMD1-211ENST00000523062 NEUROD2Q15784 382 aa8.92□□□□□ -0.98
CSMD1-211ENST00000523062 C14orf37Q86TY3 774 aa8.92□□□□□ -0.98
CSMD1-211ENST00000523062 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-211ENST00000523062 MYH16Q9H6N6 1097 aa8.92□□□□□ -0.98
CSMD1-211ENST00000523062 PIK3C2AO00443 1686 aa8.91□□□□□ -0.98
CSMD1-211ENST00000523062 FBLN1P23142 703 aa8.91□□□□□ -0.98
CSMD1-211ENST00000523062 TMPOP42166 694 aaKnown RBP8.91□□□□□ -0.98
CSMD1-211ENST00000523062 PXYLP1Q8TE99 480 aa8.91□□□□□ -0.98
CSMD1-211ENST00000523062 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
CSMD1-211ENST00000523062 SBNO1A3KN83 1393 aa8.9□□□□□ -0.98
CSMD1-211ENST00000523062 IL16Q14005 1332 aa8.9□□□□□ -0.98
CSMD1-211ENST00000523062 PRKAR2BP31323 418 aa8.9□□□□□ -0.98
CSMD1-211ENST00000523062 PROSER2Q86WR7 435 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-211ENST00000523062 HPS1Q92902 700 aa8.9□□□□□ -0.98
CSMD1-211ENST00000523062 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
CSMD1-211ENST00000523062 REPIN1Q9BWE0 567 aaKnown RBP8.9□□□□□ -0.98
CSMD1-211ENST00000523062 NCOA3Q9Y6Q9 1424 aa8.89□□□□□ -0.99
CSMD1-211ENST00000523062 FLT4P35916 1363 aa8.89□□□□□ -0.99
CSMD1-211ENST00000523062 KIF24Q5T7B8 1368 aa8.89□□□□□ -0.99
CSMD1-211ENST00000523062 PRDM9Q9NQV7 894 aa8.89□□□□□ -0.99
CSMD1-211ENST00000523062 DCCP43146 1447 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 PEAK1Q9H792 1746 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 ARHGEF10O15013 1369 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 MAP3K19Q56UN5 1328 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 RIPK4P57078 832 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 LMOD3Q0VAK6 560 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 EIF4A2Q14240 407 aaKnown RBP8.88□□□□□ -0.99
CSMD1-211ENST00000523062 NFE2L2Q16236 605 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 B4GALNT3Q6L9W6 998 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 SLC27A5Q9Y2P5 690 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 KIF1AQ12756 1690 aa8.88□□□□□ -0.99
CSMD1-211ENST00000523062 RTL1A6NKG5 1358 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 OATP04181 439 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 HMOX1P09601 288 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 CT47B1P0C2W7 299 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-211ENST00000523062 CALD1Q05682 793 aaKnown RBP8.87□□□□□ -0.99
CSMD1-211ENST00000523062 FUT2Q10981 343 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 TRIM32Q13049 653 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 ESCO1Q5FWF5 840 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 EXOC6Q8TAG9 804 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 CCDC136Q96JN2 1154 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 C19orf44Q9H6X5 657 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 C1orf167Q5SNV9 1468 aa8.87□□□□□ -0.99
CSMD1-211ENST00000523062 TMEM94Q12767 1356 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 RGPD1P0DJD0 1748 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 MARF1Q9Y4F3 1742 aaKnown RBP8.86□□□□□ -0.99
CSMD1-211ENST00000523062 LMTK3Q96Q04 1460 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 PLIN1O60240 522 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 ATP6V1AP38606 617 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 AMPHP49418 695 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 ABTB2Q8N961 1025 aa8.86□□□□□ -0.99
CSMD1-211ENST00000523062 H3BM21 787 aa8.85□□□□□ -0.99
CSMD1-211ENST00000523062 HSPA2P54652 639 aa8.85□□□□□ -0.99
CSMD1-211ENST00000523062 PSME1Q06323 249 aa8.85□□□□□ -0.99
CSMD1-211ENST00000523062 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
CSMD1-211ENST00000523062 CRBNQ96SW2 442 aa8.85□□□□□ -0.99
CSMD1-211ENST00000523062 ATF3P18847 181 aa8.84□□□□□ -0.99
CSMD1-211ENST00000523062 RARSP54136 660 aaKnown RBP8.84□□□□□ -0.99
CSMD1-211ENST00000523062 MST1RQ04912 1400 aa8.84□□□□□ -0.99
CSMD1-211ENST00000523062 MSS51Q4VC12 460 aa8.84□□□□□ -0.99
CSMD1-211ENST00000523062 METTL3Q86U44 580 aaKnown RBP8.84□□□□□ -0.99
CSMD1-211ENST00000523062 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
CSMD1-211ENST00000523062 PHACTR3Q96KR7 559 aa8.84□□□□□ -0.99
CSMD1-211ENST00000523062 NFAT5O94916 1531 aa8.84□□□□□ -0.99
CSMD1-211ENST00000523062 STRCP1A6NGW2 1772 aa8.84□□□□□ -1
CSMD1-211ENST00000523062 IGSF1Q8N6C5 1336 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 BCAR3O75815 825 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 CANXP27824 592 aaKnown RBP8.83□□□□□ -1
CSMD1-211ENST00000523062 HOXC9P31274 260 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 KCNMA1Q12791 1236 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 PDE3AQ14432 1141 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 NUTM2GQ5VZR2 741 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 SULT6B1Q6IMI4 303 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 AEBP1Q8IUX7 1158 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 KCNH5Q8NCM2 988 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 ORAI2Q96SN7 254 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 SLIT3O75094 1523 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 MSH6P52701 1360 aa8.83□□□□□ -1
CSMD1-211ENST00000523062 TRPM3Q9HCF6 1732 aaPredicted RBP8.83□□□□□ -1
CSMD1-211ENST00000523062 GNAI1P63096 354 aa8.82□□□□□ -1
CSMD1-211ENST00000523062 C20orf194Q5TEA3 1177 aa8.82□□□□□ -1
CSMD1-211ENST00000523062 TSR2Q969E8 191 aaKnown RBP8.82□□□□□ -1
CSMD1-211ENST00000523062 TSHZ2Q9NRE2 1034 aa8.82□□□□□ -1
CSMD1-211ENST00000523062 IFT57Q9NWB7 429 aa8.82□□□□□ -1
CSMD1-211ENST00000523062 KDRP35968 1356 aa8.82□□□□□ -1
CSMD1-211ENST00000523062 USP19O94966 1318 aa8.81□□□□□ -1
CSMD1-211ENST00000523062 PHRF1Q9P1Y6 1649 aaKnown RBP8.81□□□□□ -1
CSMD1-211ENST00000523062 FOXO3O43524 673 aa8.81□□□□□ -1
CSMD1-211ENST00000523062 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
CSMD1-211ENST00000523062 ZNF428Q96B54 188 aa8.81□□□□□ -1
CSMD1-211ENST00000523062 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
CSMD1-211ENST00000523062 ERBB4Q15303 1308 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 MS4A1P11836 297 aa8.8□□□□□ -1
CSMD1-211ENST00000523062 FECHP22830 423 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms