RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 LCE3BQ5TA77 95 aa7.09□□□□□ -1.27
PCM1-217ENST00000522998 MICALL1Q8N3F8 863 aa7.09□□□□□ -1.27
PCM1-217ENST00000522998 NEUROD4Q9HD90 331 aa7.09□□□□□ -1.27
PCM1-217ENST00000522998 BACH1O14867 736 aa7.08□□□□□ -1.28
PCM1-217ENST00000522998 C8orf86Q6ZUL3 223 aa7.08□□□□□ -1.28
PCM1-217ENST00000522998 TNFRSF25Q93038 417 aa7.08□□□□□ -1.28
PCM1-217ENST00000522998 SLC30A3Q99726 388 aa7.08□□□□□ -1.28
PCM1-217ENST00000522998 KRTAP4-12Q9BQ66 201 aa7.08□□□□□ -1.28
PCM1-217ENST00000522998 SCHIP1Q9P0W5 487 aaPredicted RBP7.08□□□□□ -1.28
PCM1-217ENST00000522998 NID1P14543 1247 aa7.07□□□□□ -1.28
PCM1-217ENST00000522998 ADH7P40394 386 aa7.07□□□□□ -1.28
PCM1-217ENST00000522998 NEUROD1Q13562 356 aa7.07□□□□□ -1.28
PCM1-217ENST00000522998 ZDHHC1Q8WTX9 485 aa7.07□□□□□ -1.28
PCM1-217ENST00000522998 L3MBTL2Q969R5 705 aa7.07□□□□□ -1.28
PCM1-217ENST00000522998 C9orf172C9J069 976 aa7.06□□□□□ -1.28
PCM1-217ENST00000522998 EML1O00423 815 aa7.06□□□□□ -1.28
PCM1-217ENST00000522998 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
PCM1-217ENST00000522998 H2AFB2P0C5Z0 115 aa7.06□□□□□ -1.28
PCM1-217ENST00000522998 SFSWAPQ12872 951 aaKnown RBP7.06□□□□□ -1.28
PCM1-217ENST00000522998 SEMA3FQ13275 785 aa7.06□□□□□ -1.28
PCM1-217ENST00000522998 LRP8Q14114 963 aa7.06□□□□□ -1.28
PCM1-217ENST00000522998 PCDHGA11Q9Y5H2 935 aa7.06□□□□□ -1.28
PCM1-217ENST00000522998 GPC6Q9Y625 555 aaPredicted RBP7.06□□□□□ -1.28
PCM1-217ENST00000522998 NOS2P35228 1153 aa7.05□□□□□ -1.28
PCM1-217ENST00000522998 SPEM2Q0P670 501 aa7.05□□□□□ -1.28
PCM1-217ENST00000522998 TEAD4Q15561 434 aa7.05□□□□□ -1.28
PCM1-217ENST00000522998 TRAPPC3LQ5T215 181 aa7.05□□□□□ -1.28
PCM1-217ENST00000522998 ZNF232Q9UNY5 417 aa7.05□□□□□ -1.28
PCM1-217ENST00000522998 ABL2P42684 1182 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 PSME1Q06323 249 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 WASHC4Q2M389 1173 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 EML3Q32P44 896 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 RAB44Q7Z6P3 723 aaPredicted RBP7.04□□□□□ -1.28
PCM1-217ENST00000522998 BCANQ96GW7 911 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 ZNF358Q9NW07 568 aa7.04□□□□□ -1.28
PCM1-217ENST00000522998 LILRB5O75023 590 aa7.03□□□□□ -1.28
PCM1-217ENST00000522998 SOX11P35716 441 aa7.03□□□□□ -1.28
PCM1-217ENST00000522998 BRPF1P55201 1214 aaPredicted RBP7.03□□□□□ -1.28
PCM1-217ENST00000522998 C20orf204Q6ZNR8 217 aa7.03□□□□□ -1.28
PCM1-217ENST00000522998 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
PCM1-217ENST00000522998 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
PCM1-217ENST00000522998 RHPN1Q8TCX5 695 aa7.03□□□□□ -1.28
PCM1-217ENST00000522998 GDPD2Q9HCC8 539 aa7.03□□□□□ -1.28
PCM1-217ENST00000522998 NOD1Q9Y239 953 aa7.03□□□□□ -1.28
PCM1-217ENST00000522998 ELNP15502 786 aa7.02□□□□□ -1.29
PCM1-217ENST00000522998 SELPP16109 830 aa7.02□□□□□ -1.29
PCM1-217ENST00000522998 GTF2IP78347 998 aa7.02□□□□□ -1.29
PCM1-217ENST00000522998 SLC9A9Q8IVB4 645 aa7.02□□□□□ -1.29
PCM1-217ENST00000522998 C7orf43Q8WVR3 580 aa7.02□□□□□ -1.29
PCM1-217ENST00000522998 A0A0A0MRY4 1105 aa7.01□□□□□ -1.29
PCM1-217ENST00000522998 SERTM1A2A2V5 107 aa7.01□□□□□ -1.29
PCM1-217ENST00000522998 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
PCM1-217ENST00000522998 HYAL3O43820 417 aaPredicted RBP7.01□□□□□ -1.29
PCM1-217ENST00000522998 RAC1P63000 192 aa7.01□□□□□ -1.29
PCM1-217ENST00000522998 NRG1Q02297 640 aaPredicted RBP7.01□□□□□ -1.29
PCM1-217ENST00000522998 TBCELQ5QJ74 424 aa7.01□□□□□ -1.29
PCM1-217ENST00000522998 CEP63Q96MT8 703 aa7.01□□□□□ -1.29
PCM1-217ENST00000522998 BRD7Q9NPI1 651 aa7.01□□□□□ -1.29
PCM1-217ENST00000522998 EPHA4P54764 986 aa7□□□□□ -1.29
PCM1-217ENST00000522998 TP53INP1Q96A56 240 aa7□□□□□ -1.29
PCM1-217ENST00000522998 LENG1Q96BZ8 264 aaPredicted RBP7□□□□□ -1.29
PCM1-217ENST00000522998 KCNH4Q9UQ05 1017 aa7□□□□□ -1.29
PCM1-217ENST00000522998 SKIP12755 728 aa6.99□□□□□ -1.29
PCM1-217ENST00000522998 TBC1D8BQ0IIM8 1120 aa6.99□□□□□ -1.29
PCM1-217ENST00000522998 SH3PXD2AQ5TCZ1 1133 aa6.99□□□□□ -1.29
PCM1-217ENST00000522998 TNS4Q8IZW8 715 aa6.99□□□□□ -1.29
PCM1-217ENST00000522998 ANKIB1Q9P2G1 1089 aa6.99□□□□□ -1.29
PCM1-217ENST00000522998 BTBD11A6QL63 1104 aa6.98□□□□□ -1.29
PCM1-217ENST00000522998 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
PCM1-217ENST00000522998 LZTS3O60299 673 aaPredicted RBP6.98□□□□□ -1.29
PCM1-217ENST00000522998 KCNQ4P56696 695 aa6.98□□□□□ -1.29
PCM1-217ENST00000522998 SHISA2Q6UWI4 295 aa6.98□□□□□ -1.29
PCM1-217ENST00000522998 BHMTQ93088 406 aa6.98□□□□□ -1.29
PCM1-217ENST00000522998 HSH2DQ96JZ2 352 aa6.98□□□□□ -1.29
PCM1-217ENST00000522998 UBE2OQ9C0C9 1292 aaKnown RBP6.98□□□□□ -1.29
PCM1-217ENST00000522998 JPH1Q9HDC5 661 aaPredicted RBP6.98□□□□□ -1.29
PCM1-217ENST00000522998 USP21Q9UK80 565 aa6.98□□□□□ -1.29
PCM1-217ENST00000522998 C1orf53Q5VUE5 145 aa6.97□□□□□ -1.29
PCM1-217ENST00000522998 SLC6A14Q9UN76 642 aa6.97□□□□□ -1.29
PCM1-217ENST00000522998 PSMA6P60900 246 aaKnown RBP6.96□□□□□ -1.3
PCM1-217ENST00000522998 TYRO3Q06418 890 aa6.96□□□□□ -1.3
PCM1-217ENST00000522998 NCOA4Q13772 614 aa6.96□□□□□ -1.3
PCM1-217ENST00000522998 NUDT8Q8WV74 236 aa6.96□□□□□ -1.3
PCM1-217ENST00000522998 IGFLR1Q9H665 355 aa6.96□□□□□ -1.3
PCM1-217ENST00000522998 CHMP3Q9Y3E7 222 aa6.96□□□□□ -1.3
PCM1-217ENST00000522998 NFATC2IPQ8NCF5 419 aa6.95□□□□□ -1.3
PCM1-217ENST00000522998 PHACTR1Q9C0D0 580 aa6.95□□□□□ -1.3
PCM1-217ENST00000522998 HCN4Q9Y3Q4 1203 aa6.95□□□□□ -1.3
PCM1-217ENST00000522998 HIRAP54198 1017 aaPredicted RBP6.94□□□□□ -1.3
PCM1-217ENST00000522998 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
PCM1-217ENST00000522998 FMR1NBQ8N0W7 255 aaPredicted RBP6.94□□□□□ -1.3
PCM1-217ENST00000522998 ZNF280CQ8ND82 737 aa6.94□□□□□ -1.3
PCM1-217ENST00000522998 SUSD3Q96L08 255 aa6.94□□□□□ -1.3
PCM1-217ENST00000522998 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
PCM1-217ENST00000522998 GOLGA2P5Q9HBQ8 144 aa6.94□□□□□ -1.3
PCM1-217ENST00000522998 AFF1P51825 1210 aaKnown RBP6.93□□□□□ -1.3
PCM1-217ENST00000522998 PSAPL1Q6NUJ1 521 aa6.93□□□□□ -1.3
PCM1-217ENST00000522998 TRIM50Q86XT4 487 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms