RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 ATP13A2Q9NQ11 1180 aa10.33□□□□□ -0.76
PVT1-214ENST00000522875 ABCC2Q92887 1545 aa10.33□□□□□ -0.76
PVT1-214ENST00000522875 NUP153P49790 1475 aaKnown RBP10.32□□□□□ -0.76
PVT1-214ENST00000522875 PPP1R12BO60237 982 aaPredicted RBP10.32□□□□□ -0.76
PVT1-214ENST00000522875 TRIM26Q12899 539 aaPredicted RBP10.32□□□□□ -0.76
PVT1-214ENST00000522875 TMEM214Q6NUQ4 689 aaKnown RBP10.32□□□□□ -0.76
PVT1-214ENST00000522875 CAPN12Q6ZSI9 719 aa10.32□□□□□ -0.76
PVT1-214ENST00000522875 ZNF295-AS1Q8N0V1 137 aa10.32□□□□□ -0.76
PVT1-214ENST00000522875 MKNK1Q9BUB5 465 aa10.32□□□□□ -0.76
PVT1-214ENST00000522875 EPRSP07814 1512 aaKnown RBP10.32□□□□□ -0.76
PVT1-214ENST00000522875 CDK13Q14004 1512 aaKnown RBP10.32□□□□□ -0.76
PVT1-214ENST00000522875 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
PVT1-214ENST00000522875 ATP10BO94823 1461 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 FIGNL2A6NMB9 653 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 TTLL8A6PVC2 850 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 PRICKLE2Q7Z3G6 844 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 KCTD17Q8N5Z5 321 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 CDK11AQ9UQ88 783 aaPredicted RBP10.31□□□□□ -0.76
PVT1-214ENST00000522875 PARP3Q9Y6F1 533 aa10.31□□□□□ -0.76
PVT1-214ENST00000522875 UHRF1BP1LA0JNW5 1464 aa10.3□□□□□ -0.76
PVT1-214ENST00000522875 CCDC18Q5T9S5 1454 aa10.3□□□□□ -0.76
PVT1-214ENST00000522875 LRRIQ1Q96JM4 1722 aa10.3□□□□□ -0.76
PVT1-214ENST00000522875 ADCY10Q96PN6 1610 aa10.3□□□□□ -0.76
PVT1-214ENST00000522875 SH3PXD2AQ5TCZ1 1133 aa10.3□□□□□ -0.76
PVT1-214ENST00000522875 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
PVT1-214ENST00000522875 ZDHHC1Q8WTX9 485 aa10.3□□□□□ -0.76
PVT1-214ENST00000522875 POU4F2Q12837 409 aa10.29□□□□□ -0.76
PVT1-214ENST00000522875 TAS1R3Q7RTX0 852 aa10.29□□□□□ -0.76
PVT1-214ENST00000522875 C1orf216Q8TAB5 229 aa10.29□□□□□ -0.76
PVT1-214ENST00000522875 RHBDD1Q8TEB9 315 aa10.29□□□□□ -0.76
PVT1-214ENST00000522875 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
PVT1-214ENST00000522875 TIAM1Q13009 1591 aa10.29□□□□□ -0.76
PVT1-214ENST00000522875 MTUS2Q5JR59 1369 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 LCE2BO14633 110 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 FOXO3O43524 673 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 GTF2E1P29083 439 aaPredicted RBP10.28□□□□□ -0.76
PVT1-214ENST00000522875 NOS2P35228 1153 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 PHKA2P46019 1235 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 PSMA6P60900 246 aaKnown RBP10.28□□□□□ -0.76
PVT1-214ENST00000522875 KCNA1Q09470 495 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 C4orf17Q53FE4 359 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 Q6ZNB5 142 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 LYSMD3Q7Z3D4 306 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 DNMT3LQ9UJW3 386 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 CFAP43Q8NDM7 1665 aa10.28□□□□□ -0.76
PVT1-214ENST00000522875 ZCCHC11Q5TAX3 1644 aaKnown RBP10.27□□□□□ -0.77
PVT1-214ENST00000522875 TEAD4Q15561 434 aa10.27□□□□□ -0.77
PVT1-214ENST00000522875 L3MBTL2Q969R5 705 aa10.27□□□□□ -0.77
PVT1-214ENST00000522875 NIFKQ9BYG3 293 aaKnown RBP10.27□□□□□ -0.77
PVT1-214ENST00000522875 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
PVT1-214ENST00000522875 MAP3K1Q13233 1512 aa10.27□□□□□ -0.77
PVT1-214ENST00000522875 KIF13AQ9H1H9 1805 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 SERTM1A2A2V5 107 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 EML1O00423 815 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 RHOQP17081 205 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 PLA2G4AP47712 749 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 GNASQ5JWF2 1037 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 TXNDC2Q86VQ3 553 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 STAG2Q8N3U4 1231 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 ZNF232Q9UNY5 417 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 KDM5BQ9UGL1 1544 aa10.26□□□□□ -0.77
PVT1-214ENST00000522875 LRRC9Q6ZRR7 1453 aa10.25□□□□□ -0.77
PVT1-214ENST00000522875 ARID4AP29374 1257 aaPredicted RBP10.25□□□□□ -0.77
PVT1-214ENST00000522875 NAA30Q147X3 362 aaPredicted RBP10.25□□□□□ -0.77
PVT1-214ENST00000522875 NBPF10Q6P3W6 841 aaKnown RBP10.25□□□□□ -0.77
PVT1-214ENST00000522875 POTEAQ6S8J7 498 aa10.25□□□□□ -0.77
PVT1-214ENST00000522875 HCN4Q9Y3Q4 1203 aa10.25□□□□□ -0.77
PVT1-214ENST00000522875 IVNS1ABPQ9Y6Y0 642 aa10.25□□□□□ -0.77
PVT1-214ENST00000522875 SERPINB4P48594 390 aa10.24□□□□□ -0.77
PVT1-214ENST00000522875 GMPR2Q9P2T1 348 aaKnown RBP10.24□□□□□ -0.77
PVT1-214ENST00000522875 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
PVT1-214ENST00000522875 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
PVT1-214ENST00000522875 TXLNAP40222 546 aa10.23□□□□□ -0.77
PVT1-214ENST00000522875 VTI1AQ96AJ9 217 aa10.23□□□□□ -0.77
PVT1-214ENST00000522875 NGLY1Q96IV0 654 aa10.23□□□□□ -0.77
PVT1-214ENST00000522875 TROQ12816 1431 aaPredicted RBP10.23□□□□□ -0.77
PVT1-214ENST00000522875 MAGI3Q5TCQ9 1506 aa10.23□□□□□ -0.77
PVT1-214ENST00000522875 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
PVT1-214ENST00000522875 MAN1A2O60476 641 aa10.22□□□□□ -0.77
PVT1-214ENST00000522875 PTCD1O75127 700 aaKnown RBP10.22□□□□□ -0.77
PVT1-214ENST00000522875 CCER1Q8TC90 406 aaPredicted RBP10.22□□□□□ -0.77
PVT1-214ENST00000522875 COL26A1Q96A83 441 aa10.22□□□□□ -0.77
PVT1-214ENST00000522875 AIDAQ96BJ3 306 aa10.22□□□□□ -0.77
PVT1-214ENST00000522875 GNEQ9Y223 722 aaKnown RBP10.22□□□□□ -0.77
PVT1-214ENST00000522875 ASXL2Q76L83 1435 aa10.22□□□□□ -0.77
PVT1-214ENST00000522875 HIRAP54198 1017 aaPredicted RBP10.21□□□□□ -0.77
PVT1-214ENST00000522875 ALDH16A1Q8IZ83 802 aa10.21□□□□□ -0.77
PVT1-214ENST00000522875 SAP130Q9H0E3 1048 aa10.21□□□□□ -0.77
PVT1-214ENST00000522875 QTRT2Q9H974 415 aaKnown RBP10.21□□□□□ -0.77
PVT1-214ENST00000522875 PATL2C9JE40 543 aaKnown RBP10.2□□□□□ -0.78
PVT1-214ENST00000522875 ABL1P00519 1130 aa10.2□□□□□ -0.78
PVT1-214ENST00000522875 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.2□□□□□ -0.78
PVT1-214ENST00000522875 SUPT6HQ7KZ85 1726 aaKnown RBP10.2□□□□□ -0.78
PVT1-214ENST00000522875 GTF3C2Q8WUA4 911 aaPredicted RBP10.2□□□□□ -0.78
PVT1-214ENST00000522875 PHACTR1Q9C0D0 580 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms