RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ST5P78524 1137 aa13.51□□□□□ -0.25
CTNNA1-235ENST00000522730 RALBP1Q15311 655 aa13.51□□□□□ -0.25
CTNNA1-235ENST00000522730 PNISRQ8TF01 805 aaKnown RBP13.51□□□□□ -0.25
CTNNA1-235ENST00000522730 ZNF652Q9Y2D9 606 aa13.51□□□□□ -0.25
CTNNA1-235ENST00000522730 MYL6BP14649 208 aa13.5□□□□□ -0.25
CTNNA1-235ENST00000522730 RIPK4P57078 832 aa13.5□□□□□ -0.25
CTNNA1-235ENST00000522730 NEUROD2Q15784 382 aa13.5□□□□□ -0.25
CTNNA1-235ENST00000522730 CCDC146Q8IYE0 955 aa13.5□□□□□ -0.25
CTNNA1-235ENST00000522730 RRAGCQ9HB90 399 aa13.5□□□□□ -0.25
CTNNA1-235ENST00000522730 NIP7Q9Y221 180 aaKnown RBP eCLIP13.5□□□□□ -0.25
CTNNA1-235ENST00000522730 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-235ENST00000522730 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-235ENST00000522730 HSPA6P17066 643 aa13.49□□□□□ -0.25
CTNNA1-235ENST00000522730 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
CTNNA1-235ENST00000522730 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 LMNB1P20700 586 aa13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 HLFQ16534 295 aa13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 CLEC4GQ6UXB4 293 aa13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 TPTE2Q6XPS3 522 aa13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
CTNNA1-235ENST00000522730 TOMM70O94826 608 aa13.47□□□□□ -0.25
CTNNA1-235ENST00000522730 EIF2S2P20042 333 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-235ENST00000522730 LAS1LQ9Y4W2 734 aaKnown RBP13.47□□□□□ -0.25
CTNNA1-235ENST00000522730 PRELPP51888 382 aa13.46□□□□□ -0.25
CTNNA1-235ENST00000522730 WDR43Q15061 677 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTNNA1-235ENST00000522730 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
CTNNA1-235ENST00000522730 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
CTNNA1-235ENST00000522730 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.26
CTNNA1-235ENST00000522730 NFKBIEO00221 500 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 SRGNP10124 158 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 GPTP24298 496 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 PRPF40BQ6NWY9 871 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
CTNNA1-235ENST00000522730 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-235ENST00000522730 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
CTNNA1-235ENST00000522730 ERFEQ4G0M1 354 aa13.43□□□□□ -0.26
CTNNA1-235ENST00000522730 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
CTNNA1-235ENST00000522730 NRXN2Q9P2S2 1712 aa13.43□□□□□ -0.26
CTNNA1-235ENST00000522730 ADAMTS8Q9UP79 889 aa13.43□□□□□ -0.26
CTNNA1-235ENST00000522730 GLTPD2A6NH11 291 aa13.42□□□□□ -0.26
CTNNA1-235ENST00000522730 ANXA1P04083 346 aa13.42□□□□□ -0.26
CTNNA1-235ENST00000522730 NPR1P16066 1061 aa13.42□□□□□ -0.26
CTNNA1-235ENST00000522730 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
CTNNA1-235ENST00000522730 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
CTNNA1-235ENST00000522730 RBM46Q8TBY0 533 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-235ENST00000522730 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
CTNNA1-235ENST00000522730 MAP3K15Q6ZN16 1313 aa13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 ERVV-1B6SEH8 477 aa13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 APLP1P51693 650 aa13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 AIMP1Q12904 312 aaKnown RBP13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
CTNNA1-235ENST00000522730 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
CTNNA1-235ENST00000522730 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
CTNNA1-235ENST00000522730 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
CTNNA1-235ENST00000522730 HTRA3P83110 453 aa13.4□□□□□ -0.26
CTNNA1-235ENST00000522730 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
CTNNA1-235ENST00000522730 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
CTNNA1-235ENST00000522730 KRT24Q2M2I5 525 aa13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 PROSER3Q2NL68 480 aa13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 CCDC93Q567U6 631 aa13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 SUSD4Q5VX71 490 aa13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 SBF1O95248 1867 aa13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-235ENST00000522730 RGL2O15211 777 aa13.38□□□□□ -0.27
CTNNA1-235ENST00000522730 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
CTNNA1-235ENST00000522730 FSTL1Q12841 308 aa13.38□□□□□ -0.27
CTNNA1-235ENST00000522730 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-235ENST00000522730 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
CTNNA1-235ENST00000522730 ZNF277Q9NRM2 450 aaPredicted RBP13.38□□□□□ -0.27
CTNNA1-235ENST00000522730 KLRG2A4D1S0 409 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 DDNO94850 711 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 PDIA6Q15084 440 aa13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 COPS6Q7L5N1 327 aa13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 SMC1BQ8NDV3 1235 aa13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
CTNNA1-235ENST00000522730 SLX4Q8IY92 1834 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 DLEC1Q9Y238 1755 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 CHL1O00533 1208 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 GIGYF2Q6Y7W6 1299 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 ZNF34Q8IZ26 560 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 RTKN2Q8IZC4 609 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 XAGE3Q8WTP9 111 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 ERBB4Q15303 1308 aa13.36□□□□□ -0.27
CTNNA1-235ENST00000522730 UBN2Q6ZU65 1347 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms