RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
PABPC1-220ENST00000522658 STRN4Q9NRL3 753 aa9.09□□□□□ -0.95
PABPC1-220ENST00000522658 PPP1R1BQ9UD71 204 aaPredicted RBP9.09□□□□□ -0.95
PABPC1-220ENST00000522658 ZMYND10O75800 440 aa9.08□□□□□ -0.96
PABPC1-220ENST00000522658 EVA1CP58658 441 aa9.08□□□□□ -0.96
PABPC1-220ENST00000522658 NFX1Q12986 1120 aaKnown RBP9.08□□□□□ -0.96
PABPC1-220ENST00000522658 AMHR2Q16671 573 aa9.08□□□□□ -0.96
PABPC1-220ENST00000522658 KRI1Q8N9T8 703 aaKnown RBP9.08□□□□□ -0.96
PABPC1-220ENST00000522658 ATP7BP35670 1465 aa9.08□□□□□ -0.96
PABPC1-220ENST00000522658 SPATA31A5Q5VU36 1347 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 SPATA31A7Q8IWB4 1347 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 PDE3BQ13370 1112 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 NBPF8Q3BBV2 869 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 NBPF14Q5TI25 921 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 FAM196AQ6ZSG2 479 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 USP35Q9P2H5 1018 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 TRPM3Q9HCF6 1732 aaPredicted RBP9.07□□□□□ -0.96
PABPC1-220ENST00000522658 PARD3Q8TEW0 1356 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 ALS2Q96Q42 1657 aa9.07□□□□□ -0.96
PABPC1-220ENST00000522658 DISP2A7MBM2 1401 aa9.06□□□□□ -0.96
PABPC1-220ENST00000522658 WFS1O76024 890 aa9.06□□□□□ -0.96
PABPC1-220ENST00000522658 SNRPBP14678 240 aaKnown RBP9.06□□□□□ -0.96
PABPC1-220ENST00000522658 FAM182BQ5T319 152 aa9.06□□□□□ -0.96
PABPC1-220ENST00000522658 TRIM47Q96LD4 638 aa9.06□□□□□ -0.96
PABPC1-220ENST00000522658 THSD7AQ9UPZ6 1657 aa9.05□□□□□ -0.96
PABPC1-220ENST00000522658 KIAA0232Q92628 1395 aa9.05□□□□□ -0.96
PABPC1-220ENST00000522658 MOXD2PA6NHM9 499 aa9.05□□□□□ -0.96
PABPC1-220ENST00000522658 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
PABPC1-220ENST00000522658 WASLO00401 505 aaPredicted RBP9.05□□□□□ -0.96
PABPC1-220ENST00000522658 TRIM37O94972 964 aa9.05□□□□□ -0.96
PABPC1-220ENST00000522658 APBA3O96018 575 aa9.05□□□□□ -0.96
PABPC1-220ENST00000522658 NDUFV2P19404 249 aa9.05□□□□□ -0.96
PABPC1-220ENST00000522658 EZH2Q15910 746 aaKnown RBP9.05□□□□□ -0.96
PABPC1-220ENST00000522658 ZBTB7CA1YPR0 619 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 CCNYL3P0C7X3 344 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 MS4A1P11836 297 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 ZC3H6P61129 1189 aaKnown RBP9.04□□□□□ -0.96
PABPC1-220ENST00000522658 SH3BP2P78314 561 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 CHRNA2Q15822 529 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 PTPRNQ16849 979 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 DCAF11Q8TEB1 546 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 ZC3H15Q8WU90 426 aaKnown RBP9.04□□□□□ -0.96
PABPC1-220ENST00000522658 SENP2Q9HC62 589 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 TNS1Q9HBL0 1735 aaKnown RBP9.04□□□□□ -0.96
PABPC1-220ENST00000522658 PHRF1Q9P1Y6 1649 aaKnown RBP9.04□□□□□ -0.96
PABPC1-220ENST00000522658 SPATA31A1Q5TZJ5 1347 aa9.04□□□□□ -0.96
PABPC1-220ENST00000522658 ALDH1A1P00352 501 aa9.03□□□□□ -0.96
PABPC1-220ENST00000522658 YY1P25490 414 aa9.03□□□□□ -0.96
PABPC1-220ENST00000522658 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
PABPC1-220ENST00000522658 NUTM2GQ5VZR2 741 aa9.03□□□□□ -0.96
PABPC1-220ENST00000522658 EVA1BQ9NVM1 165 aa9.03□□□□□ -0.96
PABPC1-220ENST00000522658 ADGRB1O14514 1584 aa9.03□□□□□ -0.96
PABPC1-220ENST00000522658 GIGYF2Q6Y7W6 1299 aaKnown RBP9.02□□□□□ -0.97
PABPC1-220ENST00000522658 SSH2Q76I76 1423 aa9.02□□□□□ -0.97
PABPC1-220ENST00000522658 PRR36Q9H6K5 1346 aa9.02□□□□□ -0.97
PABPC1-220ENST00000522658 RAB3GAP2Q9H2M9 1393 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 WIPF1O43516 503 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
PABPC1-220ENST00000522658 DESI1Q6ICB0 168 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 TCP11L2Q8N4U5 519 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 ABTB2Q8N961 1025 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 EHBP1Q8NDI1 1231 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 PRR7Q8TB68 274 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 NUDT16Q96DE0 195 aaKnown RBP9.01□□□□□ -0.97
PABPC1-220ENST00000522658 SPON1Q9HCB6 807 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 CRYBG1Q9Y4K1 1723 aa9.01□□□□□ -0.97
PABPC1-220ENST00000522658 ARHGEF28Q8N1W1 1705 aaKnown RBP9□□□□□ -0.97
PABPC1-220ENST00000522658 GJA5P36382 358 aa9□□□□□ -0.97
PABPC1-220ENST00000522658 SRPK2P78362 688 aaKnown RBP9□□□□□ -0.97
PABPC1-220ENST00000522658 KIFC2Q96AC6 838 aa9□□□□□ -0.97
PABPC1-220ENST00000522658 UNC93B1Q9H1C4 597 aa9□□□□□ -0.97
PABPC1-220ENST00000522658 THRAP3Q9Y2W1 955 aaKnown RBP9□□□□□ -0.97
PABPC1-220ENST00000522658 NRKQ7Z2Y5 1582 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 OVOS2A0A0G2JMS6 1433 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 OVOS2A0A0J9YW53 1432 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 OVOS2Q6IE36 1432 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 SPDYE5A6NIY4 337 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 TERTO14746 1132 aaKnown RBP8.99□□□□□ -0.97
PABPC1-220ENST00000522658 KCNH2Q12809 1159 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 MTMR2Q13614 643 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 NLRP13Q86W25 1043 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 CAMKK2Q96RR4 588 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 BEGAINQ9BUH8 593 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 ACEP12821 1306 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 NINLQ9Y2I6 1382 aa8.99□□□□□ -0.97
PABPC1-220ENST00000522658 RREB1Q92766 1687 aa8.98□□□□□ -0.97
PABPC1-220ENST00000522658 NUP188Q5SRE5 1749 aa8.98□□□□□ -0.97
PABPC1-220ENST00000522658 CDK19Q9BWU1 502 aa8.98□□□□□ -0.97
PABPC1-220ENST00000522658 RSBN1LQ6PCB5 846 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-220ENST00000522658 LARP1Q6PKG0 1096 aaKnown RBP8.97□□□□□ -0.97
PABPC1-220ENST00000522658 TRIM46Q7Z4K8 759 aa8.97□□□□□ -0.97
PABPC1-220ENST00000522658 PARP9Q8IXQ6 854 aa8.97□□□□□ -0.97
PABPC1-220ENST00000522658 BAP1Q92560 729 aa8.97□□□□□ -0.97
PABPC1-220ENST00000522658 TOPAZ1Q8N9V7 1692 aa8.97□□□□□ -0.97
PABPC1-220ENST00000522658 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-220ENST00000522658 CPDO75976 1380 aa8.97□□□□□ -0.97
PABPC1-220ENST00000522658 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
PABPC1-220ENST00000522658 KCNQ2O43526 872 aa8.96□□□□□ -0.98
PABPC1-220ENST00000522658 CSB-PGBD3P0DP91 1061 aa8.96□□□□□ -0.98
PABPC1-220ENST00000522658 DDB1Q16531 1140 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms