RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
TRAPPC9-213ENST00000522504 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
TRAPPC9-213ENST00000522504 POTEIP0CG38 1075 aa20.48■□□□□ 0.87
TRAPPC9-213ENST00000522504 POTEJP0CG39 1038 aa20.48■□□□□ 0.87
TRAPPC9-213ENST00000522504 DPY19L2Q6NUT2 758 aa20.48■□□□□ 0.87
TRAPPC9-213ENST00000522504 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 DDNO94850 711 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 ST5P78524 1137 aa20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 DCTN1Q14203 1278 aa20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 C7orf43Q8WVR3 580 aa20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 CNKSR1Q969H4 720 aa20.47■□□□□ 0.87
TRAPPC9-213ENST00000522504 NPHP1O15259 732 aa20.46■□□□□ 0.87
TRAPPC9-213ENST00000522504 NPM2Q86SE8 214 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-213ENST00000522504 MASTLQ96GX5 879 aa20.46■□□□□ 0.87
TRAPPC9-213ENST00000522504 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
TRAPPC9-213ENST00000522504 SNRPA1P09661 255 aaKnown RBP20.45■□□□□ 0.86
TRAPPC9-213ENST00000522504 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-213ENST00000522504 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRAPPC9-213ENST00000522504 NBPF5PQ86XG9 351 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-213ENST00000522504 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
TRAPPC9-213ENST00000522504 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
TRAPPC9-213ENST00000522504 OLFM4Q6UX06 510 aa20.44■□□□□ 0.86
TRAPPC9-213ENST00000522504 DICER1Q9UPY3 1922 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-213ENST00000522504 HSPA1AP0DMV8 641 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-213ENST00000522504 HSPA1BP0DMV9 641 aaKnown RBP20.43■□□□□ 0.86
TRAPPC9-213ENST00000522504 CLEC4GQ6UXB4 293 aa20.43■□□□□ 0.86
TRAPPC9-213ENST00000522504 KLRG2A4D1S0 409 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC9-213ENST00000522504 CHADLQ6NUI6 762 aa20.42■□□□□ 0.86
TRAPPC9-213ENST00000522504 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
TRAPPC9-213ENST00000522504 CAPN15O75808 1086 aa20.41■□□□□ 0.86
TRAPPC9-213ENST00000522504 HLFQ16534 295 aa20.41■□□□□ 0.86
TRAPPC9-213ENST00000522504 TNS4Q8IZW8 715 aa20.41■□□□□ 0.86
TRAPPC9-213ENST00000522504 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
TRAPPC9-213ENST00000522504 MIS18AQ9NYP9 233 aa20.41■□□□□ 0.86
TRAPPC9-213ENST00000522504 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
TRAPPC9-213ENST00000522504 NPR1P16066 1061 aa20.4■□□□□ 0.86
TRAPPC9-213ENST00000522504 SOGA3Q5TF21 947 aa20.4■□□□□ 0.86
TRAPPC9-213ENST00000522504 NIP7Q9Y221 180 aaKnown RBP eCLIP20.4■□□□□ 0.86
TRAPPC9-213ENST00000522504 CACNA1SQ13698 1873 aa20.39■□□□□ 0.86
TRAPPC9-213ENST00000522504 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC9-213ENST00000522504 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.85
TRAPPC9-213ENST00000522504 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.85
TRAPPC9-213ENST00000522504 ZNF541Q9H0D2 1346 aa20.38■□□□□ 0.85
TRAPPC9-213ENST00000522504 CCDC93Q567U6 631 aa20.38■□□□□ 0.85
TRAPPC9-213ENST00000522504 L3MBTL3Q96JM7 780 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC9-213ENST00000522504 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
TRAPPC9-213ENST00000522504 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
TRAPPC9-213ENST00000522504 FKBP4Q02790 459 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRAPPC9-213ENST00000522504 TPTE2Q6XPS3 522 aa20.37■□□□□ 0.85
TRAPPC9-213ENST00000522504 TAF1DQ9H5J8 278 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC9-213ENST00000522504 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
TRAPPC9-213ENST00000522504 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC9-213ENST00000522504 PASKQ96RG2 1323 aa20.35■□□□□ 0.85
TRAPPC9-213ENST00000522504 RGL2O15211 777 aa20.35■□□□□ 0.85
TRAPPC9-213ENST00000522504 LDHDQ86WU2 507 aa20.34■□□□□ 0.85
TRAPPC9-213ENST00000522504 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
TRAPPC9-213ENST00000522504 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
TRAPPC9-213ENST00000522504 SLC51AQ86UW1 340 aa20.33■□□□□ 0.85
TRAPPC9-213ENST00000522504 NGEFQ8N5V2 710 aa20.33■□□□□ 0.85
TRAPPC9-213ENST00000522504 SNED1Q8TER0 1413 aa20.33■□□□□ 0.84
TRAPPC9-213ENST00000522504 ITGBL1O95965 494 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC9-213ENST00000522504 TTLL7Q6ZT98 887 aa20.32■□□□□ 0.84
TRAPPC9-213ENST00000522504 NUTM1Q86Y26 1132 aa20.32■□□□□ 0.84
TRAPPC9-213ENST00000522504 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
TRAPPC9-213ENST00000522504 RTKN2Q8IZC4 609 aa20.31■□□□□ 0.84
TRAPPC9-213ENST00000522504 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
TRAPPC9-213ENST00000522504 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
TRAPPC9-213ENST00000522504 CNTNAP1P78357 1384 aa20.31■□□□□ 0.84
TRAPPC9-213ENST00000522504 FZD9O00144 591 aa20.3■□□□□ 0.84
TRAPPC9-213ENST00000522504 IARSP41252 1262 aaKnown RBP20.3■□□□□ 0.84
TRAPPC9-213ENST00000522504 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC9-213ENST00000522504 PLEKHF1Q96S99 279 aa20.3■□□□□ 0.84
TRAPPC9-213ENST00000522504 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-213ENST00000522504 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
TRAPPC9-213ENST00000522504 EIF4A1P60842 406 aaKnown RBP20.29■□□□□ 0.84
TRAPPC9-213ENST00000522504 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
TRAPPC9-213ENST00000522504 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
TRAPPC9-213ENST00000522504 COL4A5P29400 1685 aa20.29■□□□□ 0.84
TRAPPC9-213ENST00000522504 RNF123Q5XPI4 1314 aa20.28■□□□□ 0.84
TRAPPC9-213ENST00000522504 UBN2Q6ZU65 1347 aa20.28■□□□□ 0.84
TRAPPC9-213ENST00000522504 SCN4AP35499 1836 aa20.28■□□□□ 0.84
TRAPPC9-213ENST00000522504 ERVV-1B6SEH8 477 aa20.28■□□□□ 0.84
TRAPPC9-213ENST00000522504 FOXN1O15353 648 aa20.28■□□□□ 0.84
TRAPPC9-213ENST00000522504 EPHX2P34913 555 aa20.28■□□□□ 0.84
TRAPPC9-213ENST00000522504 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.84
TRAPPC9-213ENST00000522504 GPTP24298 496 aa20.27■□□□□ 0.84
TRAPPC9-213ENST00000522504 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 ADAMTSL1Q8N6G6 1762 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 TMEM88BA6NKF7 163 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 MYL6BP14649 208 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 VEGFBP49765 207 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 SUSD4Q5VX71 490 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 PSMD1Q99460 953 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 ZBTB3Q9H5J0 574 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
TRAPPC9-213ENST00000522504 HOXA10P31260 410 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC9-213ENST00000522504 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms