RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CDK5RAP3Q96JB5 506 aa16.19■□□□□ 0.18
SYNPO-205ENST00000522122 DBF4Q9UBU7 674 aaPredicted RBP16.19■□□□□ 0.18
SYNPO-205ENST00000522122 USP25Q9UHP3 1055 aa16.19■□□□□ 0.18
SYNPO-205ENST00000522122 CEP152O94986 1710 aa16.19■□□□□ 0.18
SYNPO-205ENST00000522122 IQGAP1P46940 1657 aa16.19■□□□□ 0.18
SYNPO-205ENST00000522122 FAM177A1Q8N128 213 aaPredicted RBP16.19■□□□□ 0.18
SYNPO-205ENST00000522122 EDC4Q6P2E9 1401 aaKnown RBP16.18■□□□□ 0.18
SYNPO-205ENST00000522122 CCDC8Q9H0W5 538 aaPredicted RBP16.18■□□□□ 0.18
SYNPO-205ENST00000522122 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 UBE2HP62256 183 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 STX6O43752 255 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 GDPD2Q9HCC8 539 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 NOL7Q9UMY1 257 aaKnown RBP16.18■□□□□ 0.18
SYNPO-205ENST00000522122 IL13P35225 146 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 ZGPATQ8N5A5 531 aaKnown RBP16.18■□□□□ 0.18
SYNPO-205ENST00000522122 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 ARAP3Q8WWN8 1544 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
SYNPO-205ENST00000522122 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 INTS4Q96HW7 963 aaKnown RBP16.17■□□□□ 0.18
SYNPO-205ENST00000522122 EFCAB6Q5THR3 1501 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 IDH1O75874 414 aaKnown RBP16.17■□□□□ 0.18
SYNPO-205ENST00000522122 STIM1Q13586 685 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 ADCY5O95622 1261 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 TSHZ3Q63HK5 1081 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 PRIMPOLQ96LW4 560 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 UBAC1Q9BSL1 405 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 CHD1O14646 1710 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 TDO2P48775 406 aa16.17■□□□□ 0.18
SYNPO-205ENST00000522122 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
SYNPO-205ENST00000522122 ANO10Q9NW15 660 aa16.16■□□□□ 0.18
SYNPO-205ENST00000522122 CT47A1Q5JQC4 288 aaPredicted RBP16.16■□□□□ 0.18
SYNPO-205ENST00000522122 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
SYNPO-205ENST00000522122 PDCL2Q8N4E4 241 aa16.16■□□□□ 0.18
SYNPO-205ENST00000522122 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
SYNPO-205ENST00000522122 ATP8B2P98198 1209 aa16.16■□□□□ 0.18
SYNPO-205ENST00000522122 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
SYNPO-205ENST00000522122 CCAR1Q8IX12 1150 aaKnown RBP16.16■□□□□ 0.18
SYNPO-205ENST00000522122 WASF1Q92558 559 aa16.16■□□□□ 0.18
SYNPO-205ENST00000522122 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
SYNPO-205ENST00000522122 MYD88Q99836 296 aa16.15■□□□□ 0.18
SYNPO-205ENST00000522122 CFAP100Q494V2 611 aa16.15■□□□□ 0.18
SYNPO-205ENST00000522122 MPRIPQ6WCQ1 1025 aa16.15■□□□□ 0.18
SYNPO-205ENST00000522122 USP48Q86UV5 1035 aa16.15■□□□□ 0.18
SYNPO-205ENST00000522122 EVI5LQ96CN4 794 aa16.15■□□□□ 0.18
SYNPO-205ENST00000522122 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
SYNPO-205ENST00000522122 AKAP2Q9Y2D5 859 aa16.15■□□□□ 0.18
SYNPO-205ENST00000522122 KIF2AO00139 706 aaPredicted RBP16.14■□□□□ 0.17
SYNPO-205ENST00000522122 IFIT1P09914 478 aaKnown RBP16.14■□□□□ 0.17
SYNPO-205ENST00000522122 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNPO-205ENST00000522122 GJB2P29033 226 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 IKQ13123 557 aaPredicted RBP16.14■□□□□ 0.17
SYNPO-205ENST00000522122 PPP1R42Q7Z4L9 355 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 RBSNQ9H1K0 784 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 HYPKQ9NX55 129 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 AMOTL2Q9Y2J4 779 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 PTPN14Q15678 1187 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 AIDAQ96BJ3 306 aa16.14■□□□□ 0.17
SYNPO-205ENST00000522122 DDX19AQ9NUU7 478 aaKnown RBP16.14■□□□□ 0.17
SYNPO-205ENST00000522122 QRICH2Q9H0J4 1663 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 CKAP2LQ8IYA6 745 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 UBXN4Q92575 508 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 LMBRD1Q9NUN5 540 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 ACEP12821 1306 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 ERLIN1O75477 346 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 LEKR1Q6ZMV7 388 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 PPP1R9BQ96SB3 815 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 METTL24Q5JXM2 366 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
SYNPO-205ENST00000522122 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
SYNPO-205ENST00000522122 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
SYNPO-205ENST00000522122 CTAGE5O15320 804 aa16.12■□□□□ 0.17
SYNPO-205ENST00000522122 TERF1P54274 439 aa16.12■□□□□ 0.17
SYNPO-205ENST00000522122 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
SYNPO-205ENST00000522122 C8orf76Q96K31 380 aa16.12■□□□□ 0.17
SYNPO-205ENST00000522122 LRP2BPQ9P2M1 347 aa16.12■□□□□ 0.17
SYNPO-205ENST00000522122 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
SYNPO-205ENST00000522122 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
SYNPO-205ENST00000522122 GSPT1P15170 499 aaKnown RBP16.12■□□□□ 0.17
SYNPO-205ENST00000522122 PI4KAP2A4QPH2 592 aa16.12■□□□□ 0.17
SYNPO-205ENST00000522122 PI4KAP1Q8N8J0 262 aa16.12■□□□□ 0.17
SYNPO-205ENST00000522122 TFIP11Q9UBB9 837 aaKnown RBP16.12■□□□□ 0.17
SYNPO-205ENST00000522122 KRT18P05783 430 aaKnown RBP16.11■□□□□ 0.17
SYNPO-205ENST00000522122 TTC21AQ8NDW8 1320 aa16.11■□□□□ 0.17
SYNPO-205ENST00000522122 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
SYNPO-205ENST00000522122 CNPY2Q9Y2B0 182 aa16.11■□□□□ 0.17
SYNPO-205ENST00000522122 LUC7LQ9NQ29 371 aaKnown RBP16.11■□□□□ 0.17
SYNPO-205ENST00000522122 DEF6Q9H4E7 631 aa16.11■□□□□ 0.17
SYNPO-205ENST00000522122 RAI14Q9P0K7 980 aa16.11■□□□□ 0.17
SYNPO-205ENST00000522122 H0YHG0 523 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 CHMLP26374 656 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 GUCY1B3Q02153 619 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 RHPN1Q8TCX5 695 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 STARD3NLO95772 234 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 KIF18AQ8NI77 898 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 SOGA3Q5TF21 947 aa16.1■□□□□ 0.17
SYNPO-205ENST00000522122 A0A087WZG4 1122 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms