RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 RELBQ01201 579 aa7.94□□□□□ -1.14
CTNNA1-233ENST00000522052 FOXC1Q12948 553 aa7.94□□□□□ -1.14
CTNNA1-233ENST00000522052 TMEM214Q6NUQ4 689 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-233ENST00000522052 RHBDD1Q8TEB9 315 aa7.94□□□□□ -1.14
CTNNA1-233ENST00000522052 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
CTNNA1-233ENST00000522052 PKD2L1Q9P0L9 805 aa7.94□□□□□ -1.14
CTNNA1-233ENST00000522052 LDLRAD1Q5T700 205 aa7.93□□□□□ -1.14
CTNNA1-233ENST00000522052 FAM161BQ96MY7 647 aa7.93□□□□□ -1.14
CTNNA1-233ENST00000522052 ZNF395Q9H8N7 513 aaPredicted RBP7.93□□□□□ -1.14
CTNNA1-233ENST00000522052 MRS2Q9HD23 443 aa7.93□□□□□ -1.14
CTNNA1-233ENST00000522052 WWC3Q9ULE0 1092 aa7.93□□□□□ -1.14
CTNNA1-233ENST00000522052 PNMA6FA0A0J9YX94 578 aa7.92□□□□□ -1.14
CTNNA1-233ENST00000522052 SORBS3O60504 671 aa7.92□□□□□ -1.14
CTNNA1-233ENST00000522052 TIMP2P16035 220 aa7.92□□□□□ -1.14
CTNNA1-233ENST00000522052 PCSK2P16519 638 aa7.92□□□□□ -1.14
CTNNA1-233ENST00000522052 GPC1P35052 558 aa7.92□□□□□ -1.14
CTNNA1-233ENST00000522052 ALG1LQ6GMV1 187 aa7.92□□□□□ -1.14
CTNNA1-233ENST00000522052 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 TXLNAP40222 546 aa7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 HDLBPQ00341 1268 aaKnown RBP7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 PSMD2Q13200 908 aa7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 GNASQ5JWF2 1037 aa7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 TREML1Q86YW5 311 aa7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 SETDB2Q96T68 719 aa7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 GRIP2Q9C0E4 1043 aa7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 RNF19AQ9NV58 838 aa7.91□□□□□ -1.14
CTNNA1-233ENST00000522052 J3QL48 77 aa7.9□□□□□ -1.14
CTNNA1-233ENST00000522052 HIF1AQ16665 826 aa7.9□□□□□ -1.14
CTNNA1-233ENST00000522052 TMEM87AQ8NBN3 555 aa7.9□□□□□ -1.14
CTNNA1-233ENST00000522052 GPR152Q8TDT2 470 aa7.9□□□□□ -1.14
CTNNA1-233ENST00000522052 SREK1Q8WXA9 508 aaKnown RBP7.9□□□□□ -1.14
CTNNA1-233ENST00000522052 FAM13BQ9NYF5 915 aa7.9□□□□□ -1.14
CTNNA1-233ENST00000522052 BCS1LQ9Y276 419 aa7.9□□□□□ -1.14
CTNNA1-233ENST00000522052 TTC24A2A3L6 582 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 RPLP1P05386 114 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 PLA2G4AP47712 749 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 RNF144AP50876 292 aaPredicted RBP7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 NAALADL2Q58DX5 795 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 SLC27A3Q5K4L6 730 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 MEIOBQ8N635 442 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 FBF1Q8TES7 1133 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 NUDT16Q96DE0 195 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 DRC1Q96MC2 740 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 CSRNP1Q96S65 589 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 VTI1BQ9UEU0 232 aa7.89□□□□□ -1.15
CTNNA1-233ENST00000522052 MICAL2O94851 1124 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 NEFLP07196 543 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 GNA15P30679 374 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 C4orf17Q53FE4 359 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 CYP4X1Q8N118 509 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 RHPN1Q8TCX5 695 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 C7orf43Q8WVR3 580 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 CFHR5Q9BXR6 569 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 ZDHHC3Q9NYG2 299 aa7.88□□□□□ -1.15
CTNNA1-233ENST00000522052 TGFBR3LH3BV60 316 aa7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 GDF9O60383 454 aa7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 NBPF1Q3BBV0 1214 aa7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 C9orf131Q5VYM1 1079 aa7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 TTC16Q8NEE8 873 aa7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 FRMD6Q96NE9 622 aa7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 DNAJC25Q9H1X3 360 aa7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 METTL5Q9NRN9 209 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 GPC6Q9Y625 555 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 V9GY48 417 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-233ENST00000522052 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 EIF1AYO14602 144 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 RAD51AP2Q09MP3 1159 aa7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 ORC1Q13415 861 aa7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 C8orf34Q49A92 452 aa7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 IER5Q5VY09 327 aa7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 METTL16Q86W50 562 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 PIK3R5Q8WYR1 880 aa7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 TOR4AQ9NXH8 423 aa7.86□□□□□ -1.15
CTNNA1-233ENST00000522052 SPINT1O43278 529 aa7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 SMPD1P17405 629 aa7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 FANCCQ00597 558 aa7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 RNF34Q969K3 372 aa7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 AIDAQ96BJ3 306 aa7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 SUSD3Q96L08 255 aa7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 INSM2Q96T92 566 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 DMGDHQ9UI17 866 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-233ENST00000522052 A6NHS1 94 aa7.84□□□□□ -1.15
CTNNA1-233ENST00000522052 OPLAHO14841 1288 aa7.84□□□□□ -1.15
CTNNA1-233ENST00000522052 TATP17735 454 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-233ENST00000522052 SF3A1Q15459 793 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-233ENST00000522052 NT5DC4Q86YG4 428 aa7.84□□□□□ -1.15
CTNNA1-233ENST00000522052 AK5Q9Y6K8 562 aa7.84□□□□□ -1.15
CTNNA1-233ENST00000522052 CPNE3O75131 537 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-233ENST00000522052 ZNF76P36508 570 aa7.83□□□□□ -1.16
CTNNA1-233ENST00000522052 IDH3AP50213 366 aa7.83□□□□□ -1.16
CTNNA1-233ENST00000522052 POLMQ9NP87 494 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-233ENST00000522052 ANKIB1Q9P2G1 1089 aa7.83□□□□□ -1.16
CTNNA1-233ENST00000522052 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
CTNNA1-233ENST00000522052 A0A0G2JS52 829 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 TNFRSF10AO00220 468 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 PHKA2P46019 1235 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 XKR5Q6UX68 686 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms