RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 CCDC175P0C221 793 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-219ENST00000522006 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 A0A087WZG4 1122 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 KIF20AO95235 890 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 ANKIB1Q9P2G1 1089 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
LAMA4-219ENST00000522006 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
LAMA4-219ENST00000522006 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 CTNNA2P26232 953 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-219ENST00000522006 ISM2Q6H9L7 571 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 GIGYF2Q6Y7W6 1299 aaKnown RBP13.14□□□□□ -0.31
LAMA4-219ENST00000522006 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
LAMA4-219ENST00000522006 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 KCNH5Q8NCM2 988 aa13.14□□□□□ -0.31
LAMA4-219ENST00000522006 TBC1D9Q6ZT07 1266 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
LAMA4-219ENST00000522006 GOLGA6L9A6NEM1 432 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 LMAN1P49257 510 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
LAMA4-219ENST00000522006 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 FAM114A1Q8IWE2 563 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 BAG4O95429 457 aaKnown RBP13.13□□□□□ -0.31
LAMA4-219ENST00000522006 LIG1P18858 919 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 MCM5P33992 734 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
LAMA4-219ENST00000522006 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
LAMA4-219ENST00000522006 EHMT1Q9H9B1 1298 aa13.12□□□□□ -0.31
LAMA4-219ENST00000522006 AMPD3Q01432 767 aa13.12□□□□□ -0.31
LAMA4-219ENST00000522006 JADE2Q9NQC1 790 aa13.12□□□□□ -0.31
LAMA4-219ENST00000522006 FERMT2Q96AC1 680 aa13.12□□□□□ -0.31
LAMA4-219ENST00000522006 UVSSAQ2YD98 709 aa13.12□□□□□ -0.31
LAMA4-219ENST00000522006 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
LAMA4-219ENST00000522006 UBE2Q2Q8WVN8 375 aa13.12□□□□□ -0.31
LAMA4-219ENST00000522006 ZPR1O75312 459 aa13.12□□□□□ -0.31
LAMA4-219ENST00000522006 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
LAMA4-219ENST00000522006 GPATCH11Q8N954 259 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 PTPRCP08575 1304 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 UBE2HP62256 183 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 TCERG1LQ5VWI1 586 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 ANKLE2Q86XL3 938 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 PANK2Q9BZ23 570 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 TROQ12816 1431 aaPredicted RBP13.11□□□□□ -0.31
LAMA4-219ENST00000522006 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 USP16Q9Y5T5 823 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 TMEM67Q5HYA8 995 aa13.11□□□□□ -0.31
LAMA4-219ENST00000522006 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
LAMA4-219ENST00000522006 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
LAMA4-219ENST00000522006 HSF2BPO75031 334 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 TRIM27P14373 513 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 ZNF165P49910 485 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 SPECC1LQ69YQ0 1117 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 ZSWIM4Q9H7M6 989 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 TCP11L1Q9NUJ3 509 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 GOLIM4O00461 696 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 IARSP41252 1262 aaKnown RBP13.1□□□□□ -0.31
LAMA4-219ENST00000522006 CETN1Q12798 172 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
LAMA4-219ENST00000522006 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 GNG11P61952 73 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
LAMA4-219ENST00000522006 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 METAP2P50579 478 aaKnown RBP eCLIP13.1□□□□□ -0.31
LAMA4-219ENST00000522006 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
LAMA4-219ENST00000522006 PRC1O43663 620 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 CCDC61Q9Y6R9 512 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 CCDC141Q6ZP82 1450 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 MPRIPQ6WCQ1 1025 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 PYM1Q9BRP8 204 aaKnown RBP13.09□□□□□ -0.31
LAMA4-219ENST00000522006 FSD2A1L4K1 749 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 IDEP14735 1019 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 TTC22Q5TAA0 569 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 NEK1Q96PY6 1258 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 MYO1BO43795 1136 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 PPFIA3O75145 1194 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 NME9Q86XW9 330 aa13.09□□□□□ -0.31
LAMA4-219ENST00000522006 GIMAP6Q6P9H5 292 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 ECHDC1Q9NTX5 307 aa13.08□□□□□ -0.32
LAMA4-219ENST00000522006 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms