RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 COL23A1Q86Y22 540 aaPredicted RBP30.79■■■□□ 2.52
PVT1-212ENST00000521951 NARFQ9UHQ1 456 aa30.79■■■□□ 2.52
PVT1-212ENST00000521951 MAP3K15Q6ZN16 1313 aa30.79■■■□□ 2.52
PVT1-212ENST00000521951 PI4KAP2A4QPH2 592 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 IPO8O15397 1037 aaKnown RBP30.78■■■□□ 2.52
PVT1-212ENST00000521951 KSR2Q6VAB6 950 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 PI4KAP1Q8N8J0 262 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 PLBD2Q8NHP8 589 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 ARHGAP45Q92619 1136 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 ZBTB3Q9H5J0 574 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 CAMTA2O94983 1202 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 RIC3Q7Z5B4 369 aa30.78■■■□□ 2.52
PVT1-212ENST00000521951 ADCY9O60503 1353 aa30.77■■■□□ 2.52
PVT1-212ENST00000521951 ZKSCAN2Q63HK3 967 aa30.77■■■□□ 2.52
PVT1-212ENST00000521951 SRP68Q9UHB9 627 aaKnown RBP30.77■■■□□ 2.52
PVT1-212ENST00000521951 ERVV-1B6SEH8 477 aa30.76■■■□□ 2.51
PVT1-212ENST00000521951 PLIN1O60240 522 aa30.76■■■□□ 2.51
PVT1-212ENST00000521951 ZPR1O75312 459 aa30.76■■■□□ 2.51
PVT1-212ENST00000521951 F6X3S4 739 aa30.75■■■□□ 2.51
PVT1-212ENST00000521951 ATF7IPQ6VMQ6 1270 aa30.75■■■□□ 2.51
PVT1-212ENST00000521951 API5Q9BZZ5 524 aaKnown RBP30.75■■■□□ 2.51
PVT1-212ENST00000521951 MAP3K2Q9Y2U5 619 aa30.75■■■□□ 2.51
PVT1-212ENST00000521951 SUPT16HQ9Y5B9 1047 aaKnown RBP30.75■■■□□ 2.51
PVT1-212ENST00000521951 USP42Q9H9J4 1324 aaKnown RBP30.75■■■□□ 2.51
PVT1-212ENST00000521951 BCORQ6W2J9 1755 aa30.74■■■□□ 2.51
PVT1-212ENST00000521951 ARFGEF2Q9Y6D5 1785 aa30.74■■■□□ 2.51
PVT1-212ENST00000521951 MSH5O43196 834 aa30.74■■■□□ 2.51
PVT1-212ENST00000521951 HLFQ16534 295 aa30.74■■■□□ 2.51
PVT1-212ENST00000521951 USPL1Q5W0Q7 1092 aa30.74■■■□□ 2.51
PVT1-212ENST00000521951 TNNQ9UQP3 1299 aa30.74■■■□□ 2.51
PVT1-212ENST00000521951 NUP98P52948 1817 aa30.74■■■□□ 2.51
PVT1-212ENST00000521951 TRIM27P14373 513 aa30.73■■■□□ 2.51
PVT1-212ENST00000521951 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.73■■■□□ 2.51
PVT1-212ENST00000521951 GIGYF2Q6Y7W6 1299 aaKnown RBP30.73■■■□□ 2.51
PVT1-212ENST00000521951 DNAAF4Q8WXU2 420 aa30.73■■■□□ 2.51
PVT1-212ENST00000521951 SCN7AQ01118 1682 aa30.72■■■□□ 2.51
PVT1-212ENST00000521951 RRP1P56182 461 aaKnown RBP30.72■■■□□ 2.51
PVT1-212ENST00000521951 BCL2L12Q9HB09 334 aa30.72■■■□□ 2.51
PVT1-212ENST00000521951 R3HDM1Q15032 1099 aaKnown RBP30.71■■■□□ 2.51
PVT1-212ENST00000521951 RNF123Q5XPI4 1314 aa30.7■■■□□ 2.51
PVT1-212ENST00000521951 METTL22Q9BUU2 404 aaPredicted RBP30.7■■■□□ 2.51
PVT1-212ENST00000521951 RGL2O15211 777 aa30.69■■■□□ 2.5
PVT1-212ENST00000521951 CLEC4GQ6UXB4 293 aa30.69■■■□□ 2.5
PVT1-212ENST00000521951 CLUAP1Q96AJ1 413 aa30.69■■■□□ 2.5
PVT1-212ENST00000521951 PDGFDQ9GZP0 370 aaPredicted RBP30.69■■■□□ 2.5
PVT1-212ENST00000521951 GYS1P13807 737 aa30.68■■■□□ 2.5
PVT1-212ENST00000521951 ZNF652Q9Y2D9 606 aa30.68■■■□□ 2.5
PVT1-212ENST00000521951 TCIRG1Q13488 830 aa30.68■■■□□ 2.5
PVT1-212ENST00000521951 SLC4A10Q6U841 1118 aa30.68■■■□□ 2.5
PVT1-212ENST00000521951 MYD88Q99836 296 aa30.68■■■□□ 2.5
PVT1-212ENST00000521951 ABCC4O15439 1325 aa30.66■■■□□ 2.5
PVT1-212ENST00000521951 FKBP8Q14318 412 aa30.66■■■□□ 2.5
PVT1-212ENST00000521951 DZIP1LQ8IYY4 767 aaKnown RBP30.66■■■□□ 2.5
PVT1-212ENST00000521951 PSDA5PKW4 1024 aaPredicted RBP30.65■■■□□ 2.5
PVT1-212ENST00000521951 HSP90AB3PQ58FF7 597 aa30.65■■■□□ 2.5
PVT1-212ENST00000521951 RLBP1P12271 317 aa30.64■■■□□ 2.5
PVT1-212ENST00000521951 NEXNQ0ZGT2 675 aa30.64■■■□□ 2.5
PVT1-212ENST00000521951 BEND3Q5T5X7 828 aa30.64■■■□□ 2.5
PVT1-212ENST00000521951 ANKRD36CQ5JPF3 1778 aa30.64■■■□□ 2.5
PVT1-212ENST00000521951 ATP5J2-PTCD1G3V325 749 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 MS4A1P11836 297 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 FTSJ3Q8IY81 847 aaKnown RBP30.63■■■□□ 2.49
PVT1-212ENST00000521951 ZNF34Q8IZ26 560 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 IGKV5-2P06315 115 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 C20orf194Q5TEA3 1177 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 TBC1D9BQ66K14 1250 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 PANK1Q8TE04 598 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 ISCA1Q9BUE6 129 aa30.63■■■□□ 2.49
PVT1-212ENST00000521951 PXDNLA1KZ92 1463 aa30.62■■■□□ 2.49
PVT1-212ENST00000521951 ATP10DQ9P241 1426 aa30.62■■■□□ 2.49
PVT1-212ENST00000521951 GPTP24298 496 aa30.62■■■□□ 2.49
PVT1-212ENST00000521951 PDE3AQ14432 1141 aa30.62■■■□□ 2.49
PVT1-212ENST00000521951 LINS1Q8NG48 757 aa30.62■■■□□ 2.49
PVT1-212ENST00000521951 SLC16A10Q8TF71 515 aa30.62■■■□□ 2.49
PVT1-212ENST00000521951 CASZ1Q86V15 1759 aa30.62■■■□□ 2.49
PVT1-212ENST00000521951 NLGN1Q8N2Q7 840 aa30.61■■■□□ 2.49
PVT1-212ENST00000521951 NIP7Q9Y221 180 aaKnown RBP eCLIP30.61■■■□□ 2.49
PVT1-212ENST00000521951 CWF19L2Q2TBE0 894 aaKnown RBP30.6■■■□□ 2.49
PVT1-212ENST00000521951 INTS3Q68E01 1043 aaKnown RBP30.6■■■□□ 2.49
PVT1-212ENST00000521951 TMEM57Q8N5G2 664 aa30.6■■■□□ 2.49
PVT1-212ENST00000521951 SRCIN1Q9C0H9 1055 aa30.6■■■□□ 2.49
PVT1-212ENST00000521951 CCT4P50991 539 aaKnown RBP30.59■■■□□ 2.49
PVT1-212ENST00000521951 TRIM28Q13263 835 aaKnown RBP30.59■■■□□ 2.49
PVT1-212ENST00000521951 BICDL1Q6ZP65 573 aa30.59■■■□□ 2.49
PVT1-212ENST00000521951 AFDNP55196 1824 aaKnown RBP30.59■■■□□ 2.49
PVT1-212ENST00000521951 N4BP2Q86UW6 1770 aaPredicted RBP30.59■■■□□ 2.49
PVT1-212ENST00000521951 NEURL1BA8MQ27 555 aa30.58■■■□□ 2.49
PVT1-212ENST00000521951 MSL1Q68DK7 614 aa30.58■■■□□ 2.49
PVT1-212ENST00000521951 TM4SF1P30408 202 aa30.57■■■□□ 2.49
PVT1-212ENST00000521951 NFIXQ14938 502 aa30.57■■■□□ 2.49
PVT1-212ENST00000521951 UBN2Q6ZU65 1347 aa30.57■■■□□ 2.48
PVT1-212ENST00000521951 ALDH1L1O75891 902 aa30.57■■■□□ 2.48
PVT1-212ENST00000521951 NLRP10Q86W26 655 aa30.57■■■□□ 2.48
PVT1-212ENST00000521951 CCDC191Q8NCU4 936 aa30.57■■■□□ 2.48
PVT1-212ENST00000521951 SETDB2Q96T68 719 aa30.57■■■□□ 2.48
PVT1-212ENST00000521951 PARP10Q53GL7 1025 aa30.54■■■□□ 2.48
PVT1-212ENST00000521951 CWC25Q9NXE8 425 aaPredicted RBP30.54■■■□□ 2.48
PVT1-212ENST00000521951 GCKRQ14397 625 aa30.53■■■□□ 2.48
PVT1-212ENST00000521951 SUSD4Q5VX71 490 aa30.53■■■□□ 2.48
PVT1-212ENST00000521951 COG6Q9Y2V7 657 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms