RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 PRDM9Q9NQV7 894 aa8.41□□□□□ -1.06
SPIDR-216ENST00000521918 USP21Q9UK80 565 aa8.41□□□□□ -1.06
SPIDR-216ENST00000521918 MON2Q7Z3U7 1717 aa8.4□□□□□ -1.06
SPIDR-216ENST00000521918 SLIT3O75094 1523 aa8.4□□□□□ -1.06
SPIDR-216ENST00000521918 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
SPIDR-216ENST00000521918 DESI1Q6ICB0 168 aa8.4□□□□□ -1.06
SPIDR-216ENST00000521918 TESK2Q96S53 571 aa8.4□□□□□ -1.06
SPIDR-216ENST00000521918 TRPC5Q9UL62 973 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-216ENST00000521918 USP54Q70EL1 1684 aa8.4□□□□□ -1.07
SPIDR-216ENST00000521918 LMO7Q8WWI1 1683 aa8.4□□□□□ -1.07
SPIDR-216ENST00000521918 A0A0G2JS52 829 aa8.39□□□□□ -1.07
SPIDR-216ENST00000521918 UNC5CLQ8IV45 518 aa8.39□□□□□ -1.07
SPIDR-216ENST00000521918 CABP1Q9NZU7 370 aa8.39□□□□□ -1.07
SPIDR-216ENST00000521918 TIMELESSQ9UNS1 1208 aa8.39□□□□□ -1.07
SPIDR-216ENST00000521918 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
SPIDR-216ENST00000521918 DXOO77932 396 aaKnown RBP8.38□□□□□ -1.07
SPIDR-216ENST00000521918 MMP16P51512 607 aa8.38□□□□□ -1.07
SPIDR-216ENST00000521918 GTF3C3Q9Y5Q9 886 aa8.38□□□□□ -1.07
SPIDR-216ENST00000521918 CPDO75976 1380 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 KIAA0232Q92628 1395 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 USP47Q96K76 1375 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 S1PR4O95977 384 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 JUNDP17535 347 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 VPS72Q15906 364 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 TMEM259Q4ZIN3 620 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 GJD4Q96KN9 370 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-216ENST00000521918 SLC6A16Q9GZN6 736 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 THSD7AQ9UPZ6 1657 aa8.37□□□□□ -1.07
SPIDR-216ENST00000521918 NFAT5O94916 1531 aa8.36□□□□□ -1.07
SPIDR-216ENST00000521918 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
SPIDR-216ENST00000521918 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-216ENST00000521918 PUS7Q96PZ0 661 aaKnown RBP8.36□□□□□ -1.07
SPIDR-216ENST00000521918 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 MYOM1P52179 1685 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 CAMTA1Q9Y6Y1 1673 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 AP1G2O75843 785 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 NUTM2GQ5VZR2 741 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 LYPD8Q6UX82 237 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-216ENST00000521918 COL18A1P39060 1754 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
SPIDR-216ENST00000521918 SRCAPQ6ZRS2 3230 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 BRWD3Q6RI45 1802 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 USP17L8P0C7I0 530 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 GGCXP38435 758 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 ABTB2Q8N961 1025 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 TSC1Q92574 1164 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 PRDM11Q9NQV5 511 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 BTG4Q9NY30 223 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 EDC4Q6P2E9 1401 aaKnown RBP8.34□□□□□ -1.07
SPIDR-216ENST00000521918 USP31Q70CQ4 1352 aa8.34□□□□□ -1.07
SPIDR-216ENST00000521918 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
SPIDR-216ENST00000521918 ABCC6O95255 1503 aa8.34□□□□□ -1.08
SPIDR-216ENST00000521918 SPATA31A5Q5VU36 1347 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 SPATA31A7Q8IWB4 1347 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 TTC21AQ8NDW8 1320 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 COL5A2P05997 1499 aaPredicted RBP8.33□□□□□ -1.08
SPIDR-216ENST00000521918 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 GCP02774 474 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 PTPRNQ16849 979 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 PPP1R18Q6NYC8 613 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 NLRP13Q86W25 1043 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
SPIDR-216ENST00000521918 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
SPIDR-216ENST00000521918 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
SPIDR-216ENST00000521918 ZC3H6P61129 1189 aaKnown RBP8.32□□□□□ -1.08
SPIDR-216ENST00000521918 MCM6Q14566 821 aa8.32□□□□□ -1.08
SPIDR-216ENST00000521918 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
SPIDR-216ENST00000521918 MTMR14Q8NCE2 650 aa8.32□□□□□ -1.08
SPIDR-216ENST00000521918 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
SPIDR-216ENST00000521918 SLC12A5Q9H2X9 1139 aa8.32□□□□□ -1.08
SPIDR-216ENST00000521918 HMX1Q9NP08 348 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-216ENST00000521918 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
SPIDR-216ENST00000521918 SPATA31A1Q5TZJ5 1347 aa8.31□□□□□ -1.08
SPIDR-216ENST00000521918 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-216ENST00000521918 F12P00748 615 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-216ENST00000521918 CCER1Q8TC90 406 aaPredicted RBP8.31□□□□□ -1.08
SPIDR-216ENST00000521918 ANKRD36BQ8N2N9 1353 aa8.31□□□□□ -1.08
SPIDR-216ENST00000521918 ARHGEF25Q86VW2 580 aa8.3□□□□□ -1.08
SPIDR-216ENST00000521918 SEPT12Q8IYM1 358 aa8.3□□□□□ -1.08
SPIDR-216ENST00000521918 NUDT12Q9BQG2 462 aa8.3□□□□□ -1.08
SPIDR-216ENST00000521918 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
SPIDR-216ENST00000521918 WNK3Q9BYP7 1800 aa8.29□□□□□ -1.08
SPIDR-216ENST00000521918 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
SPIDR-216ENST00000521918 NME9Q86XW9 330 aa8.29□□□□□ -1.08
SPIDR-216ENST00000521918 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
SPIDR-216ENST00000521918 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
SPIDR-216ENST00000521918 TERF2IPQ9NYB0 399 aa8.29□□□□□ -1.08
SPIDR-216ENST00000521918 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
SPIDR-216ENST00000521918 TMF1P82094 1093 aa8.28□□□□□ -1.08
SPIDR-216ENST00000521918 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
SPIDR-216ENST00000521918 LARP1Q6PKG0 1096 aaKnown RBP8.28□□□□□ -1.08
SPIDR-216ENST00000521918 HDGFL2Q7Z4V5 671 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-216ENST00000521918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
SPIDR-216ENST00000521918 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
SPIDR-216ENST00000521918 TRIM34Q9BYJ4 488 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms