RNA–Protein interactions for RNA: ENST00000521723.1

PDGFRB-209, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 5

Gene PDGFRB, Length 400 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-209ENST00000521723 ERVV-1B6SEH8 477 aa14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 ANXA1P04083 346 aa14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 BICDL1Q6ZP65 573 aa14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 TTLL7Q6ZT98 887 aa14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 CHMP4AQ9BY43 222 aa14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 CHPF2Q9P2E5 772 aa14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 DBF4Q9UBU7 674 aaPredicted RBP14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 AFDNP55196 1824 aaKnown RBP14.08□□□□□ -0.16
PDGFRB-209ENST00000521723 ELL2O00472 640 aaPredicted RBP14.07□□□□□ -0.16
PDGFRB-209ENST00000521723 SERPINB2P05120 415 aa14.07□□□□□ -0.16
PDGFRB-209ENST00000521723 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
PDGFRB-209ENST00000521723 PXDNLA1KZ92 1463 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 TGFB2P61812 414 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 HLFQ16534 295 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 SETDB2Q96T68 719 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 MYH16Q9H6N6 1097 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 KIAA1551Q9HCM1 1747 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
PDGFRB-209ENST00000521723 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 TWISTNBQ3B726 338 aaPredicted RBP14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 CCDC30Q5VVM6 783 aa14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 COPS6Q7L5N1 327 aa14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 XAGE3Q8WTP9 111 aa14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 HYPKQ9NX55 129 aa14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 NUP98P52948 1817 aa14.05□□□□□ -0.16
PDGFRB-209ENST00000521723 GIGYF2Q6Y7W6 1299 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-209ENST00000521723 NIP7Q9Y221 180 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDGFRB-209ENST00000521723 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
PDGFRB-209ENST00000521723 AIMP1Q12904 312 aaKnown RBP14.03□□□□□ -0.16
PDGFRB-209ENST00000521723 PRR5LQ6MZQ0 368 aa14.03□□□□□ -0.16
PDGFRB-209ENST00000521723 CNBD1Q8NA66 436 aa14.03□□□□□ -0.16
PDGFRB-209ENST00000521723 N4BP2Q86UW6 1770 aaPredicted RBP14.03□□□□□ -0.16
PDGFRB-209ENST00000521723 E9PSI1 815 aa14.02□□□□□ -0.17
PDGFRB-209ENST00000521723 NBPF5PQ86XG9 351 aaPredicted RBP14.02□□□□□ -0.17
PDGFRB-209ENST00000521723 IBTKQ9P2D0 1353 aaPredicted RBP14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 A0A0G2JLW4 131 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 NPHP1O15259 732 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 DPEP1P16444 411 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 ST5P78524 1137 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 GPR162Q16538 588 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 HSP90AB3PQ58FF7 597 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 ZNF34Q8IZ26 560 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 PLBD2Q8NHP8 589 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 STK31Q9BXU1 1019 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 ANKRD36CQ5JPF3 1778 aa14.01□□□□□ -0.17
PDGFRB-209ENST00000521723 BRCA1P38398 1863 aaKnown RBP14□□□□□ -0.17
PDGFRB-209ENST00000521723 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
PDGFRB-209ENST00000521723 UBN2Q6ZU65 1347 aa14□□□□□ -0.17
PDGFRB-209ENST00000521723 VAMP4O75379 141 aa14□□□□□ -0.17
PDGFRB-209ENST00000521723 YBX3P16989 372 aaKnown RBP eCLIP14□□□□□ -0.17
PDGFRB-209ENST00000521723 GPTP24298 496 aa14□□□□□ -0.17
PDGFRB-209ENST00000521723 TPTE2Q6XPS3 522 aa14□□□□□ -0.17
PDGFRB-209ENST00000521723 ANKRD13DQ6ZTN6 518 aa14□□□□□ -0.17
PDGFRB-209ENST00000521723 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
PDGFRB-209ENST00000521723 BRIP1Q9BX63 1249 aa14□□□□□ -0.17
PDGFRB-209ENST00000521723 PHAXQ9H814 394 aaKnown RBP14□□□□□ -0.17
PDGFRB-209ENST00000521723 KCNA3P22001 575 aa13.99□□□□□ -0.17
PDGFRB-209ENST00000521723 SLFN5Q08AF3 891 aa13.99□□□□□ -0.17
PDGFRB-209ENST00000521723 PARP10Q53GL7 1025 aa13.99□□□□□ -0.17
PDGFRB-209ENST00000521723 NYXQ9GZU5 481 aa13.99□□□□□ -0.17
PDGFRB-209ENST00000521723 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
PDGFRB-209ENST00000521723 DLEC1Q9Y238 1755 aa13.99□□□□□ -0.17
PDGFRB-209ENST00000521723 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 TCERG1O14776 1098 aaKnown RBP13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 GRIN3BO60391 1043 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 CHRNA5P30532 468 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 PDE6BP35913 854 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 TCIRG1Q13488 830 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 CCDC24Q8N4L8 307 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 ARFGEF2Q9Y6D5 1785 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
PDGFRB-209ENST00000521723 NTSR2O95665 410 aa13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 DDX58O95786 925 aaKnown RBP13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 SUSD4Q5VX71 490 aa13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 PPP1R42Q7Z4L9 355 aa13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 C2CD5Q86YS7 1000 aa13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 PIM2Q9P1W9 311 aa13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 RIC1Q4ADV7 1423 aa13.97□□□□□ -0.17
PDGFRB-209ENST00000521723 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 COL11A2P13942 1736 aaPredicted RBP13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 H0YIN7 160 aa13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 RIC3Q7Z5B4 369 aa13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 NLRP10Q86W26 655 aa13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 TRMT2AQ8IZ69 625 aaKnown RBP13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 CDCA7LQ96GN5 454 aa13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 BCS1LQ9Y276 419 aa13.96□□□□□ -0.17
PDGFRB-209ENST00000521723 ABCC12Q96J65 1359 aa13.96□□□□□ -0.18
PDGFRB-209ENST00000521723 KLRG2A4D1S0 409 aaPredicted RBP13.95□□□□□ -0.18
PDGFRB-209ENST00000521723 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDGFRB-209ENST00000521723 ERFEQ4G0M1 354 aa13.95□□□□□ -0.18
PDGFRB-209ENST00000521723 DALRD3Q5D0E6 543 aaKnown RBP13.95□□□□□ -0.18
PDGFRB-209ENST00000521723 NUTM1Q86Y26 1132 aa13.95□□□□□ -0.18
PDGFRB-209ENST00000521723 ISCA1Q9BUE6 129 aa13.95□□□□□ -0.18
PDGFRB-209ENST00000521723 UTP14AQ9BVJ6 771 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms