RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 PRAMEF22A3QJZ6 481 aa13.65□□□□□ -0.22
TRAPPC9-209ENST00000521167 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-209ENST00000521167 DDR1Q08345 913 aa13.65□□□□□ -0.22
TRAPPC9-209ENST00000521167 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-209ENST00000521167 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
TRAPPC9-209ENST00000521167 KIAA1551Q9HCM1 1747 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 ANP32CO43423 234 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 NFIXQ14938 502 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 NEUROD2Q15784 382 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 TSPYL4Q9UJ04 414 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 NRXN2Q9P2S2 1712 aa13.64□□□□□ -0.23
TRAPPC9-209ENST00000521167 RGL2O15211 777 aa13.63□□□□□ -0.23
TRAPPC9-209ENST00000521167 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
TRAPPC9-209ENST00000521167 BRCA1P38398 1863 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-209ENST00000521167 SCN7AQ01118 1682 aa13.63□□□□□ -0.23
TRAPPC9-209ENST00000521167 PXDNLA1KZ92 1463 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 NBPF26B4DH59 902 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 CHL1O00533 1208 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 SERPINB2P05120 415 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 NBPF10Q6P3W6 841 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 DZIP3Q86Y13 1208 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 NBPF15Q8N660 670 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 BCORQ6W2J9 1755 aa13.62□□□□□ -0.23
TRAPPC9-209ENST00000521167 A0A0G2JLW4 131 aa13.61□□□□□ -0.23
TRAPPC9-209ENST00000521167 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-209ENST00000521167 DPEP1P16444 411 aa13.61□□□□□ -0.23
TRAPPC9-209ENST00000521167 ERBB4Q15303 1308 aa13.61□□□□□ -0.23
TRAPPC9-209ENST00000521167 ARFGEF1Q9Y6D6 1849 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 APAF1O14727 1248 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 TBC1D9BQ66K14 1250 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 SETDB2Q96T68 719 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 ZNF652Q9Y2D9 606 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 NUP98P52948 1817 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 UTRNP46939 3433 aa13.6□□□□□ -0.23
TRAPPC9-209ENST00000521167 KCNA3P22001 575 aa13.59□□□□□ -0.23
TRAPPC9-209ENST00000521167 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
TRAPPC9-209ENST00000521167 BICDL1Q6ZP65 573 aa13.59□□□□□ -0.23
TRAPPC9-209ENST00000521167 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
TRAPPC9-209ENST00000521167 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-209ENST00000521167 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
TRAPPC9-209ENST00000521167 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.24
TRAPPC9-209ENST00000521167 ERVV-1B6SEH8 477 aa13.57□□□□□ -0.24
TRAPPC9-209ENST00000521167 NUBP1P53384 320 aa13.57□□□□□ -0.24
TRAPPC9-209ENST00000521167 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
TRAPPC9-209ENST00000521167 BCS1LQ9Y276 419 aa13.57□□□□□ -0.24
TRAPPC9-209ENST00000521167 LAS1LQ9Y4W2 734 aaKnown RBP13.57□□□□□ -0.24
TRAPPC9-209ENST00000521167 DLEC1Q9Y238 1755 aa13.56□□□□□ -0.24
TRAPPC9-209ENST00000521167 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-209ENST00000521167 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
TRAPPC9-209ENST00000521167 ANKRD31Q8N7Z5 1873 aa13.56□□□□□ -0.24
TRAPPC9-209ENST00000521167 GOLGB1Q14789 3259 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-209ENST00000521167 H0YIN7 160 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 HOXB7P09629 217 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 CHRNA5P30532 468 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 PDE6BP35913 854 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 GNAI1P63096 354 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 ZNF784Q8NCA9 323 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 IFT57Q9NWB7 429 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 WWC3Q9ULE0 1092 aa13.55□□□□□ -0.24
TRAPPC9-209ENST00000521167 MYL6BP14649 208 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 PDIA6Q15084 440 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 CCDC27Q2M243 656 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 CNBD1Q8NA66 436 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
TRAPPC9-209ENST00000521167 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-209ENST00000521167 ST5P78524 1137 aa13.53□□□□□ -0.24
TRAPPC9-209ENST00000521167 HLFQ16534 295 aa13.53□□□□□ -0.24
TRAPPC9-209ENST00000521167 TTLL7Q6ZT98 887 aa13.53□□□□□ -0.24
TRAPPC9-209ENST00000521167 NBPF5PQ86XG9 351 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-209ENST00000521167 C2CD5Q86YS7 1000 aa13.53□□□□□ -0.24
TRAPPC9-209ENST00000521167 SBF1O95248 1867 aa13.53□□□□□ -0.24
TRAPPC9-209ENST00000521167 NPHP1O15259 732 aa13.52□□□□□ -0.25
TRAPPC9-209ENST00000521167 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.25
TRAPPC9-209ENST00000521167 LRP10Q7Z4F1 713 aa13.52□□□□□ -0.25
TRAPPC9-209ENST00000521167 TTLL6Q8N841 843 aa13.52□□□□□ -0.25
TRAPPC9-209ENST00000521167 DDX21Q9NR30 783 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRAPPC9-209ENST00000521167 MBIPQ9NS73 344 aa13.52□□□□□ -0.25
TRAPPC9-209ENST00000521167 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-209ENST00000521167 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
TRAPPC9-209ENST00000521167 NYXQ9GZU5 481 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms