RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ARXQ96QS3 562 aa19.03■□□□□ 0.64
SREK1-209ENST00000520953 N4BP2Q86UW6 1770 aaPredicted RBP19.02■□□□□ 0.64
SREK1-209ENST00000520953 TAF1LQ8IZX4 1826 aa19.02■□□□□ 0.64
SREK1-209ENST00000520953 PXDNLA1KZ92 1463 aa19.02■□□□□ 0.63
SREK1-209ENST00000520953 NUP188Q5SRE5 1749 aa19.02■□□□□ 0.63
SREK1-209ENST00000520953 TNS1Q9HBL0 1735 aaKnown RBP19.02■□□□□ 0.63
SREK1-209ENST00000520953 CCT4P50991 539 aaKnown RBP19.02■□□□□ 0.63
SREK1-209ENST00000520953 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.63
SREK1-209ENST00000520953 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
SREK1-209ENST00000520953 APBA3O96018 575 aa19.01■□□□□ 0.63
SREK1-209ENST00000520953 IGKV5-2P06315 115 aa19.01■□□□□ 0.63
SREK1-209ENST00000520953 MYD88Q99836 296 aa19.01■□□□□ 0.63
SREK1-209ENST00000520953 TBC1D2BQ9UPU7 963 aa19.01■□□□□ 0.63
SREK1-209ENST00000520953 ATP5J2-PTCD1G3V325 749 aa19■□□□□ 0.63
SREK1-209ENST00000520953 EIF5P55010 431 aaKnown RBP19■□□□□ 0.63
SREK1-209ENST00000520953 PLBD2Q8NHP8 589 aa19■□□□□ 0.63
SREK1-209ENST00000520953 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
SREK1-209ENST00000520953 IL6STP40189 918 aaPredicted RBP18.99■□□□□ 0.63
SREK1-209ENST00000520953 METTL22Q9BUU2 404 aaPredicted RBP18.99■□□□□ 0.63
SREK1-209ENST00000520953 HLFQ16534 295 aa18.99■□□□□ 0.63
SREK1-209ENST00000520953 USP44Q9H0E7 712 aa18.99■□□□□ 0.63
SREK1-209ENST00000520953 RBM19Q9Y4C8 960 aaKnown RBP18.99■□□□□ 0.63
SREK1-209ENST00000520953 ATP10DQ9P241 1426 aa18.99■□□□□ 0.63
SREK1-209ENST00000520953 IGHDP01880 384 aa18.98■□□□□ 0.63
SREK1-209ENST00000520953 TXNRD1Q16881 649 aa18.98■□□□□ 0.63
SREK1-209ENST00000520953 JARID2Q92833 1246 aaPredicted RBP18.98■□□□□ 0.63
SREK1-209ENST00000520953 C4BP0C0L5 1744 aa18.97■□□□□ 0.63
SREK1-209ENST00000520953 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
SREK1-209ENST00000520953 NBPF7P0C2Y1 421 aaPredicted RBP18.97■□□□□ 0.63
SREK1-209ENST00000520953 GNPATO15228 680 aa18.96■□□□□ 0.63
SREK1-209ENST00000520953 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
SREK1-209ENST00000520953 NEURL1BA8MQ27 555 aa18.96■□□□□ 0.63
SREK1-209ENST00000520953 KIF6Q6ZMV9 814 aa18.96■□□□□ 0.63
SREK1-209ENST00000520953 LINS1Q8NG48 757 aa18.96■□□□□ 0.63
SREK1-209ENST00000520953 COL15A1P39059 1388 aa18.95■□□□□ 0.62
SREK1-209ENST00000520953 MAP3K15Q6ZN16 1313 aa18.95■□□□□ 0.62
SREK1-209ENST00000520953 AFDNP55196 1824 aaKnown RBP18.95■□□□□ 0.62
SREK1-209ENST00000520953 SIRT2Q8IXJ6 389 aa18.95■□□□□ 0.62
SREK1-209ENST00000520953 PLSCR1O15162 318 aa18.93■□□□□ 0.62
SREK1-209ENST00000520953 PHF14O94880 888 aa18.93■□□□□ 0.62
SREK1-209ENST00000520953 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
SREK1-209ENST00000520953 RC3H1Q5TC82 1133 aaKnown RBP18.93■□□□□ 0.62
SREK1-209ENST00000520953 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
SREK1-209ENST00000520953 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
SREK1-209ENST00000520953 ALDH1L1O75891 902 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 CAMTA2O94983 1202 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 GPTP24298 496 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 EN1Q05925 392 aaPredicted RBP18.92■□□□□ 0.62
SREK1-209ENST00000520953 GCKRQ14397 625 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 SLC27A3Q5K4L6 730 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 NUP98P52948 1817 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 RPS6KA4O75676 772 aa18.92■□□□□ 0.62
SREK1-209ENST00000520953 RTL5Q5HYW3 569 aaPredicted RBP18.92■□□□□ 0.62
SREK1-209ENST00000520953 SRP68Q9UHB9 627 aaKnown RBP18.92■□□□□ 0.62
SREK1-209ENST00000520953 TCIRG1Q13488 830 aa18.91■□□□□ 0.62
SREK1-209ENST00000520953 NPM2Q86SE8 214 aaKnown RBP18.91■□□□□ 0.62
SREK1-209ENST00000520953 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
SREK1-209ENST00000520953 ZNF827Q17R98 1081 aa18.91■□□□□ 0.62
SREK1-209ENST00000520953 GIGYF2Q6Y7W6 1299 aaKnown RBP18.91■□□□□ 0.62
SREK1-209ENST00000520953 AK7Q96M32 723 aa18.91■□□□□ 0.62
SREK1-209ENST00000520953 C9orf78Q9NZ63 289 aaPredicted RBP18.91■□□□□ 0.62
SREK1-209ENST00000520953 GRM8O00222 908 aa18.9■□□□□ 0.62
SREK1-209ENST00000520953 UBTFL1P0CB47 393 aaPredicted RBP18.9■□□□□ 0.62
SREK1-209ENST00000520953 DEFB132Q7Z7B7 95 aa18.9■□□□□ 0.62
SREK1-209ENST00000520953 ISCA1Q9BUE6 129 aa18.9■□□□□ 0.62
SREK1-209ENST00000520953 AAMPQ13685 434 aa18.89■□□□□ 0.62
SREK1-209ENST00000520953 CEP85Q6P2H3 762 aa18.89■□□□□ 0.62
SREK1-209ENST00000520953 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.62
SREK1-209ENST00000520953 UBR3Q6ZT12 1888 aa18.89■□□□□ 0.61
SREK1-209ENST00000520953 GNAI2P04899 355 aa18.89■□□□□ 0.61
SREK1-209ENST00000520953 GNAI3P08754 354 aa18.89■□□□□ 0.61
SREK1-209ENST00000520953 ARHGEF1Q92888 912 aaKnown RBP18.89■□□□□ 0.61
SREK1-209ENST00000520953 KAZALD1Q96I82 304 aa18.89■□□□□ 0.61
SREK1-209ENST00000520953 SUCLG2Q96I99 432 aa18.89■□□□□ 0.61
SREK1-209ENST00000520953 UBN2Q6ZU65 1347 aa18.89■□□□□ 0.61
SREK1-209ENST00000520953 C4AP0C0L4 1744 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 UBE3BQ7Z3V4 1068 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 SYNE4Q8N205 404 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 BCL2L12Q9HB09 334 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 ANKRD36CQ5JPF3 1778 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 A0A087WZG4 1122 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 ERVV-1B6SEH8 477 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 CAMKK2Q96RR4 588 aa18.88■□□□□ 0.61
SREK1-209ENST00000520953 EPHA10Q5JZY3 1008 aa18.87■□□□□ 0.61
SREK1-209ENST00000520953 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
SREK1-209ENST00000520953 CHMP4BQ9H444 224 aaKnown RBP18.87■□□□□ 0.61
SREK1-209ENST00000520953 CWC25Q9NXE8 425 aaPredicted RBP18.87■□□□□ 0.61
SREK1-209ENST00000520953 UTYO14607 1347 aa18.87■□□□□ 0.61
SREK1-209ENST00000520953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.86■□□□□ 0.61
SREK1-209ENST00000520953 PNMA6EA0A0J9YXQ4 647 aa18.86■□□□□ 0.61
SREK1-209ENST00000520953 CASP7P55210 303 aa18.86■□□□□ 0.61
SREK1-209ENST00000520953 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
SREK1-209ENST00000520953 ANKRD44Q8N8A2 993 aa18.86■□□□□ 0.61
SREK1-209ENST00000520953 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
SREK1-209ENST00000520953 FAM177BA6PVY3 158 aa18.85■□□□□ 0.61
SREK1-209ENST00000520953 ZNF34Q8IZ26 560 aa18.85■□□□□ 0.61
SREK1-209ENST00000520953 HDAC1Q13547 482 aaPredicted RBP18.85■□□□□ 0.61
SREK1-209ENST00000520953 CCDC191Q8NCU4 936 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms