RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 LYPD4Q6UWN0 246 aa9.59□□□□□ -0.87
PTPN12-214ENST00000520947 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
PTPN12-214ENST00000520947 SUPT5HO00267 1087 aaKnown RBP9.58□□□□□ -0.88
PTPN12-214ENST00000520947 HIRAP54198 1017 aaPredicted RBP9.58□□□□□ -0.88
PTPN12-214ENST00000520947 CTBSQ01459 385 aa9.58□□□□□ -0.88
PTPN12-214ENST00000520947 POTEAQ6S8J7 498 aa9.58□□□□□ -0.88
PTPN12-214ENST00000520947 ALDH16A1Q8IZ83 802 aa9.58□□□□□ -0.88
PTPN12-214ENST00000520947 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
PTPN12-214ENST00000520947 ATG7O95352 703 aa9.57□□□□□ -0.88
PTPN12-214ENST00000520947 MAPTP10636 758 aaKnown RBP9.57□□□□□ -0.88
PTPN12-214ENST00000520947 BMP4P12644 408 aa9.57□□□□□ -0.88
PTPN12-214ENST00000520947 ELOAQ14241 798 aaKnown RBP9.57□□□□□ -0.88
PTPN12-214ENST00000520947 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
PTPN12-214ENST00000520947 STAG2Q8N3U4 1231 aa9.57□□□□□ -0.88
PTPN12-214ENST00000520947 HSH2DQ96JZ2 352 aa9.57□□□□□ -0.88
PTPN12-214ENST00000520947 PRIMPOLQ96LW4 560 aa9.57□□□□□ -0.88
PTPN12-214ENST00000520947 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
PTPN12-214ENST00000520947 CD33P20138 364 aa9.56□□□□□ -0.88
PTPN12-214ENST00000520947 WEE1P30291 646 aa9.56□□□□□ -0.88
PTPN12-214ENST00000520947 TNP2Q05952 138 aa9.56□□□□□ -0.88
PTPN12-214ENST00000520947 HCN2Q9UL51 889 aa9.56□□□□□ -0.88
PTPN12-214ENST00000520947 C2CD2LO14523 706 aa9.55□□□□□ -0.88
PTPN12-214ENST00000520947 PRMT3O60678 531 aa9.55□□□□□ -0.88
PTPN12-214ENST00000520947 CELA2BP08218 269 aaPredicted RBP9.55□□□□□ -0.88
PTPN12-214ENST00000520947 MAP2K3P46734 347 aa9.55□□□□□ -0.88
PTPN12-214ENST00000520947 TMEM164Q5U3C3 297 aa9.55□□□□□ -0.88
PTPN12-214ENST00000520947 ACDQ96AP0 544 aa9.55□□□□□ -0.88
PTPN12-214ENST00000520947 FAM157BP0CG42 384 aa9.54□□□□□ -0.88
PTPN12-214ENST00000520947 MAP3K10Q02779 954 aa9.54□□□□□ -0.88
PTPN12-214ENST00000520947 ZNF280CQ8ND82 737 aa9.54□□□□□ -0.88
PTPN12-214ENST00000520947 VTI1AQ96AJ9 217 aa9.54□□□□□ -0.88
PTPN12-214ENST00000520947 SUSD3Q96L08 255 aa9.54□□□□□ -0.88
PTPN12-214ENST00000520947 STRN4Q9NRL3 753 aa9.54□□□□□ -0.88
PTPN12-214ENST00000520947 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
PTPN12-214ENST00000520947 FAM69CQ0P6D2 419 aa9.53□□□□□ -0.88
PTPN12-214ENST00000520947 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
PTPN12-214ENST00000520947 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
PTPN12-214ENST00000520947 OXCT2Q9BYC2 517 aaPredicted RBP9.53□□□□□ -0.88
PTPN12-214ENST00000520947 FOXO3O43524 673 aa9.52□□□□□ -0.89
PTPN12-214ENST00000520947 CEP63Q96MT8 703 aa9.52□□□□□ -0.89
PTPN12-214ENST00000520947 ARID3AQ99856 593 aa9.52□□□□□ -0.89
PTPN12-214ENST00000520947 ANKIB1Q9P2G1 1089 aa9.52□□□□□ -0.89
PTPN12-214ENST00000520947 ARHGEF15O94989 841 aa9.51□□□□□ -0.89
PTPN12-214ENST00000520947 BCRP11274 1271 aa9.51□□□□□ -0.89
PTPN12-214ENST00000520947 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
PTPN12-214ENST00000520947 RTN1Q16799 776 aa9.51□□□□□ -0.89
PTPN12-214ENST00000520947 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
PTPN12-214ENST00000520947 EFSO43281 561 aa9.5□□□□□ -0.89
PTPN12-214ENST00000520947 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
PTPN12-214ENST00000520947 KLK14Q9P0G3 267 aa9.5□□□□□ -0.89
PTPN12-214ENST00000520947 MARK1Q9P0L2 795 aa9.5□□□□□ -0.89
PTPN12-214ENST00000520947 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
PTPN12-214ENST00000520947 OCLNQ16625 522 aa9.49□□□□□ -0.89
PTPN12-214ENST00000520947 QTRT2Q9H974 415 aaKnown RBP9.49□□□□□ -0.89
PTPN12-214ENST00000520947 DGKZQ13574 1117 aa9.48□□□□□ -0.89
PTPN12-214ENST00000520947 NEDD1Q8NHV4 660 aa9.48□□□□□ -0.89
PTPN12-214ENST00000520947 MKNK1Q9BUB5 465 aa9.48□□□□□ -0.89
PTPN12-214ENST00000520947 BRD7Q9NPI1 651 aa9.48□□□□□ -0.89
PTPN12-214ENST00000520947 GGA1Q9UJY5 639 aa9.48□□□□□ -0.89
PTPN12-214ENST00000520947 PRR12Q9ULL5 1215 aa9.48□□□□□ -0.89
PTPN12-214ENST00000520947 OIP5O43482 229 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 GSK3AP49840 483 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 TYRO3Q06418 890 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 KCNMA1Q12791 1236 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 HIF1AQ16665 826 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 FAM182BQ5T319 152 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 C1orf229Q6ZS94 237 aaPredicted RBP9.47□□□□□ -0.89
PTPN12-214ENST00000520947 BTLAQ7Z6A9 289 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 GALNT6Q8NCL4 622 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 ENAMQ9NRM1 1142 aa9.47□□□□□ -0.89
PTPN12-214ENST00000520947 GDF2Q9UK05 429 aaPredicted RBP9.47□□□□□ -0.89
PTPN12-214ENST00000520947 DNMT3AQ9Y6K1 912 aaPredicted RBP9.47□□□□□ -0.89
PTPN12-214ENST00000520947 NEURL1BA8MQ27 555 aa9.46□□□□□ -0.9
PTPN12-214ENST00000520947 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
PTPN12-214ENST00000520947 MARSP56192 900 aaKnown RBP9.46□□□□□ -0.9
PTPN12-214ENST00000520947 PCBP4P57723 403 aaKnown RBP9.46□□□□□ -0.9
PTPN12-214ENST00000520947 GOLGA6L1Q8N7Z2 621 aa9.46□□□□□ -0.9
PTPN12-214ENST00000520947 CXXC1Q9P0U4 656 aaPredicted RBP9.46□□□□□ -0.9
PTPN12-214ENST00000520947 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
PTPN12-214ENST00000520947 BCS1LQ9Y276 419 aa9.46□□□□□ -0.9
PTPN12-214ENST00000520947 ARAFP10398 606 aa9.45□□□□□ -0.9
PTPN12-214ENST00000520947 CAPN12Q6ZSI9 719 aa9.45□□□□□ -0.9
PTPN12-214ENST00000520947 CLP1Q92989 425 aaKnown RBP9.45□□□□□ -0.9
PTPN12-214ENST00000520947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPN12-214ENST00000520947 SHISA8B8ZZ34 492 aa9.44□□□□□ -0.9
PTPN12-214ENST00000520947 TGFBR3LH3BV60 316 aa9.44□□□□□ -0.9
PTPN12-214ENST00000520947 RAB44Q7Z6P3 723 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-214ENST00000520947 EDARADDQ8WWZ3 215 aa9.44□□□□□ -0.9
PTPN12-214ENST00000520947 SLC30A3Q99726 388 aa9.44□□□□□ -0.9
PTPN12-214ENST00000520947 KLF15Q9UIH9 416 aa9.44□□□□□ -0.9
PTPN12-214ENST00000520947 LRFN2Q9ULH4 789 aa9.44□□□□□ -0.9
PTPN12-214ENST00000520947 KCNH4Q9UQ05 1017 aa9.44□□□□□ -0.9
PTPN12-214ENST00000520947 NAA30Q147X3 362 aaPredicted RBP9.43□□□□□ -0.9
PTPN12-214ENST00000520947 C11orf91Q3C1V1 193 aa9.43□□□□□ -0.9
PTPN12-214ENST00000520947 SLCO4C1Q6ZQN7 724 aa9.43□□□□□ -0.9
PTPN12-214ENST00000520947 MYO19Q96H55 970 aa9.43□□□□□ -0.9
PTPN12-214ENST00000520947 CARNS1A5YM72 827 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 ATP2B4P23634 1241 aa9.42□□□□□ -0.9
PTPN12-214ENST00000520947 ADH6P28332 368 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms