RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 TRIM11Q96F44 468 aa9.63□□□□□ -0.87
CLK4-207ENST00000520909 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
CLK4-207ENST00000520909 SERTM1A2A2V5 107 aa9.62□□□□□ -0.87
CLK4-207ENST00000520909 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
CLK4-207ENST00000520909 EML1O00423 815 aa9.62□□□□□ -0.87
CLK4-207ENST00000520909 SPATA31C1P0DKV0 1188 aa9.62□□□□□ -0.87
CLK4-207ENST00000520909 ITGB7P26010 798 aa9.62□□□□□ -0.87
CLK4-207ENST00000520909 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
CLK4-207ENST00000520909 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
CLK4-207ENST00000520909 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
CLK4-207ENST00000520909 SIN3BO75182 1162 aa9.61□□□□□ -0.87
CLK4-207ENST00000520909 GATA4P43694 442 aa9.61□□□□□ -0.87
CLK4-207ENST00000520909 EPHA4P54764 986 aa9.61□□□□□ -0.87
CLK4-207ENST00000520909 TBCELQ5QJ74 424 aa9.61□□□□□ -0.87
CLK4-207ENST00000520909 RAD21O60216 631 aa9.6□□□□□ -0.87
CLK4-207ENST00000520909 DOC2BQ14184 412 aa9.6□□□□□ -0.87
CLK4-207ENST00000520909 PRRT3Q5FWE3 981 aa9.59□□□□□ -0.87
CLK4-207ENST00000520909 C7orf43Q8WVR3 580 aa9.59□□□□□ -0.87
CLK4-207ENST00000520909 ADARB2-AS1A8MUL3 147 aa9.58□□□□□ -0.88
CLK4-207ENST00000520909 ATP1A2P50993 1020 aa9.58□□□□□ -0.88
CLK4-207ENST00000520909 SFSWAPQ12872 951 aaKnown RBP9.58□□□□□ -0.88
CLK4-207ENST00000520909 NEUROD1Q13562 356 aa9.58□□□□□ -0.88
CLK4-207ENST00000520909 TPCN2Q8NHX9 752 aa9.58□□□□□ -0.88
CLK4-207ENST00000520909 RHPN1Q8TCX5 695 aa9.58□□□□□ -0.88
CLK4-207ENST00000520909 SEMA6BQ9H3T3 888 aa9.58□□□□□ -0.88
CLK4-207ENST00000520909 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
CLK4-207ENST00000520909 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
CLK4-207ENST00000520909 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
CLK4-207ENST00000520909 CCDC102BQ68D86 513 aa9.57□□□□□ -0.88
CLK4-207ENST00000520909 POM121Q96HA1 1249 aa9.57□□□□□ -0.88
CLK4-207ENST00000520909 ANKIB1Q9P2G1 1089 aa9.57□□□□□ -0.88
CLK4-207ENST00000520909 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
CLK4-207ENST00000520909 SH3PXD2AQ5TCZ1 1133 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 SLC30A3Q99726 388 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 MDFIQ99750 246 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 M0R082 166 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 APBA3O96018 575 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 PLEKHM2Q8IWE5 1019 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 ZNF417Q8TAU3 575 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 TNFRSF25Q93038 417 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 CEP63Q96MT8 703 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 ZNF587Q96SQ5 575 aaPredicted RBP9.56□□□□□ -0.88
CLK4-207ENST00000520909 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
CLK4-207ENST00000520909 SPEM2Q0P670 501 aa9.55□□□□□ -0.88
CLK4-207ENST00000520909 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
CLK4-207ENST00000520909 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
CLK4-207ENST00000520909 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
CLK4-207ENST00000520909 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
CLK4-207ENST00000520909 USP17L2Q6R6M4 530 aa9.54□□□□□ -0.88
CLK4-207ENST00000520909 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
CLK4-207ENST00000520909 TSPAN10Q9H1Z9 355 aaPredicted RBP9.54□□□□□ -0.88
CLK4-207ENST00000520909 BRD7Q9NPI1 651 aa9.54□□□□□ -0.88
CLK4-207ENST00000520909 PRDM6Q9NQX0 595 aa9.54□□□□□ -0.88
CLK4-207ENST00000520909 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
CLK4-207ENST00000520909 HDGFL1Q5TGJ6 251 aa9.53□□□□□ -0.88
CLK4-207ENST00000520909 MICALL1Q8N3F8 863 aa9.53□□□□□ -0.88
CLK4-207ENST00000520909 LARGE2Q8N3Y3 721 aa9.53□□□□□ -0.88
CLK4-207ENST00000520909 PHACTR1Q9C0D0 580 aa9.53□□□□□ -0.88
CLK4-207ENST00000520909 KIAA1024Q9UPX6 916 aa9.53□□□□□ -0.88
CLK4-207ENST00000520909 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
CLK4-207ENST00000520909 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
CLK4-207ENST00000520909 M0R2N6 131 aa9.52□□□□□ -0.89
CLK4-207ENST00000520909 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.89
CLK4-207ENST00000520909 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
CLK4-207ENST00000520909 CLDN10P78369 228 aa9.52□□□□□ -0.89
CLK4-207ENST00000520909 OGFOD1Q8N543 542 aa9.52□□□□□ -0.89
CLK4-207ENST00000520909 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.89
CLK4-207ENST00000520909 STARD13Q9Y3M8 1113 aa9.52□□□□□ -0.89
CLK4-207ENST00000520909 POM121CA8CG34 1229 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 ATP9BO43861 1147 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 ALBP02768 609 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 ADH7P40394 386 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 KCNQ4P56696 695 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 FLIIQ13045 1269 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 LCE3BQ5TA77 95 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
CLK4-207ENST00000520909 MKRN1Q9UHC7 482 aaKnown RBP9.51□□□□□ -0.89
CLK4-207ENST00000520909 COL9A3Q14050 684 aaPredicted RBP9.5□□□□□ -0.89
CLK4-207ENST00000520909 RAB44Q7Z6P3 723 aaPredicted RBP9.5□□□□□ -0.89
CLK4-207ENST00000520909 ADAMTS19Q8TE59 1207 aa9.5□□□□□ -0.89
CLK4-207ENST00000520909 SUSD3Q96L08 255 aa9.5□□□□□ -0.89
CLK4-207ENST00000520909 KRTAP4-12Q9BQ66 201 aa9.5□□□□□ -0.89
CLK4-207ENST00000520909 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
CLK4-207ENST00000520909 POTEAQ6S8J7 498 aa9.49□□□□□ -0.89
CLK4-207ENST00000520909 C8orf86Q6ZUL3 223 aa9.49□□□□□ -0.89
CLK4-207ENST00000520909 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
CLK4-207ENST00000520909 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
CLK4-207ENST00000520909 TSEN2Q8NCE0 465 aaKnown RBP9.48□□□□□ -0.89
CLK4-207ENST00000520909 LILRB5O75023 590 aa9.47□□□□□ -0.89
CLK4-207ENST00000520909 TYRO3Q06418 890 aa9.47□□□□□ -0.89
CLK4-207ENST00000520909 HIF1AQ16665 826 aa9.47□□□□□ -0.89
CLK4-207ENST00000520909 RSPO4Q2I0M5 234 aaPredicted RBP9.47□□□□□ -0.89
CLK4-207ENST00000520909 TRAPPC3LQ5T215 181 aa9.47□□□□□ -0.89
CLK4-207ENST00000520909 BHMTQ93088 406 aa9.47□□□□□ -0.89
CLK4-207ENST00000520909 UCN2Q96RP3 112 aa9.47□□□□□ -0.89
CLK4-207ENST00000520909 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
CLK4-207ENST00000520909 NID1P14543 1247 aa9.46□□□□□ -0.9
CLK4-207ENST00000520909 GRIK4Q16099 956 aa9.46□□□□□ -0.9
CLK4-207ENST00000520909 NKAPLQ5M9Q1 402 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms