RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 SRGNP10124 158 aa17.95■□□□□ 0.46
SRGAP3-212ENST00000520860 ST5P78524 1137 aa17.95■□□□□ 0.46
SRGAP3-212ENST00000520860 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
SRGAP3-212ENST00000520860 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
SRGAP3-212ENST00000520860 CCDC93Q567U6 631 aa17.94■□□□□ 0.46
SRGAP3-212ENST00000520860 MAP1SQ66K74 1059 aaPredicted RBP17.94■□□□□ 0.46
SRGAP3-212ENST00000520860 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
SRGAP3-212ENST00000520860 SETDB2Q96T68 719 aa17.94■□□□□ 0.46
SRGAP3-212ENST00000520860 ZNF541Q9H0D2 1346 aa17.94■□□□□ 0.46
SRGAP3-212ENST00000520860 CACNA1SQ13698 1873 aa17.93■□□□□ 0.46
SRGAP3-212ENST00000520860 PAXIP1Q6ZW49 1069 aaPredicted RBP17.93■□□□□ 0.46
SRGAP3-212ENST00000520860 TTC5Q8N0Z6 440 aa17.93■□□□□ 0.46
SRGAP3-212ENST00000520860 TBC1D2BQ9UPU7 963 aa17.93■□□□□ 0.46
SRGAP3-212ENST00000520860 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
SRGAP3-212ENST00000520860 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
SRGAP3-212ENST00000520860 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
SRGAP3-212ENST00000520860 IL13P35225 146 aa17.91■□□□□ 0.46
SRGAP3-212ENST00000520860 ECE1P42892 770 aa17.91■□□□□ 0.46
SRGAP3-212ENST00000520860 FKBP4Q02790 459 aaKnown RBP eCLIP17.91■□□□□ 0.46
SRGAP3-212ENST00000520860 CFAP44Q96MT7 982 aa17.91■□□□□ 0.46
SRGAP3-212ENST00000520860 ZNF277Q9NRM2 450 aaPredicted RBP17.91■□□□□ 0.46
SRGAP3-212ENST00000520860 ADAMTSL1Q8N6G6 1762 aa17.91■□□□□ 0.46
SRGAP3-212ENST00000520860 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
SRGAP3-212ENST00000520860 C7orf43Q8WVR3 580 aa17.9■□□□□ 0.46
SRGAP3-212ENST00000520860 CAPNS2Q96L46 248 aa17.9■□□□□ 0.46
SRGAP3-212ENST00000520860 GRM1Q13255 1194 aa17.89■□□□□ 0.45
SRGAP3-212ENST00000520860 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
SRGAP3-212ENST00000520860 DDX21Q9NR30 783 aaKnown RBP eCLIP17.89■□□□□ 0.45
SRGAP3-212ENST00000520860 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
SRGAP3-212ENST00000520860 GPR101Q96P66 508 aaPredicted RBP17.88■□□□□ 0.45
SRGAP3-212ENST00000520860 UBR2Q8IWV8 1755 aa17.88■□□□□ 0.45
SRGAP3-212ENST00000520860 NPR1P16066 1061 aa17.87■□□□□ 0.45
SRGAP3-212ENST00000520860 RTKN2Q8IZC4 609 aa17.87■□□□□ 0.45
SRGAP3-212ENST00000520860 GPC2Q8N158 579 aa17.87■□□□□ 0.45
SRGAP3-212ENST00000520860 PDE4DIPQ5VU43 2346 aa17.87■□□□□ 0.45
SRGAP3-212ENST00000520860 THSD7BQ9C0I4 1608 aa17.87■□□□□ 0.45
SRGAP3-212ENST00000520860 CAMTA2O94983 1202 aa17.86■□□□□ 0.45
SRGAP3-212ENST00000520860 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
SRGAP3-212ENST00000520860 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
SRGAP3-212ENST00000520860 PANK3Q9H999 370 aa17.86■□□□□ 0.45
SRGAP3-212ENST00000520860 HEG1Q9ULI3 1381 aa17.86■□□□□ 0.45
SRGAP3-212ENST00000520860 FZD9O00144 591 aa17.85■□□□□ 0.45
SRGAP3-212ENST00000520860 HMOX1P09601 288 aa17.85■□□□□ 0.45
SRGAP3-212ENST00000520860 LMOD1P29536 600 aaPredicted RBP17.85■□□□□ 0.45
SRGAP3-212ENST00000520860 IARSP41252 1262 aaKnown RBP17.85■□□□□ 0.45
SRGAP3-212ENST00000520860 MTHFSDQ2M296 383 aaKnown RBP17.85■□□□□ 0.45
SRGAP3-212ENST00000520860 CYP4F22Q6NT55 531 aa17.85■□□□□ 0.45
SRGAP3-212ENST00000520860 TSKSQ9UJT2 592 aa17.85■□□□□ 0.45
SRGAP3-212ENST00000520860 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
SRGAP3-212ENST00000520860 JDP2Q8WYK2 163 aa17.84■□□□□ 0.45
SRGAP3-212ENST00000520860 CA12O43570 354 aa17.83■□□□□ 0.44
SRGAP3-212ENST00000520860 TEFQ10587 303 aa17.83■□□□□ 0.44
SRGAP3-212ENST00000520860 ZNF790Q6PG37 636 aa17.83■□□□□ 0.44
SRGAP3-212ENST00000520860 SYNE4Q8N205 404 aa17.83■□□□□ 0.44
SRGAP3-212ENST00000520860 MCOLN1Q9GZU1 580 aa17.83■□□□□ 0.44
SRGAP3-212ENST00000520860 A1BGP04217 495 aa17.82■□□□□ 0.44
SRGAP3-212ENST00000520860 MAP2K2P36507 400 aa17.82■□□□□ 0.44
SRGAP3-212ENST00000520860 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
SRGAP3-212ENST00000520860 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
SRGAP3-212ENST00000520860 GJA3Q9Y6H8 435 aa17.82■□□□□ 0.44
SRGAP3-212ENST00000520860 FMR1Q06787 632 aaKnown RBP eCLIP17.81■□□□□ 0.44
SRGAP3-212ENST00000520860 FMNL2Q96PY5 1086 aa17.81■□□□□ 0.44
SRGAP3-212ENST00000520860 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
SRGAP3-212ENST00000520860 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
SRGAP3-212ENST00000520860 CLEC4GQ6UXB4 293 aa17.8■□□□□ 0.44
SRGAP3-212ENST00000520860 TPTE2Q6XPS3 522 aa17.8■□□□□ 0.44
SRGAP3-212ENST00000520860 TLL2Q9Y6L7 1015 aa17.8■□□□□ 0.44
SRGAP3-212ENST00000520860 BCORQ6W2J9 1755 aa17.79■□□□□ 0.44
SRGAP3-212ENST00000520860 ALDH1B1P30837 517 aa17.79■□□□□ 0.44
SRGAP3-212ENST00000520860 DGKZQ13574 1117 aa17.79■□□□□ 0.44
SRGAP3-212ENST00000520860 TRPM7Q96QT4 1865 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 TRAF5O00463 557 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 AOC2O75106 756 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 CST9Q5W186 159 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 PSMD1Q99460 953 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 KNSTRNQ9Y448 316 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 CASP8AP2Q9UKL3 1982 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
SRGAP3-212ENST00000520860 EPS15P42566 896 aa17.77■□□□□ 0.44
SRGAP3-212ENST00000520860 USP50Q70EL3 339 aaPredicted RBP17.77■□□□□ 0.44
SRGAP3-212ENST00000520860 SCNN1DP51172 638 aa17.76■□□□□ 0.43
SRGAP3-212ENST00000520860 NIP7Q9Y221 180 aaKnown RBP eCLIP17.76■□□□□ 0.43
SRGAP3-212ENST00000520860 FAM177BA6PVY3 158 aa17.75■□□□□ 0.43
SRGAP3-212ENST00000520860 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
SRGAP3-212ENST00000520860 GTF2E1P29083 439 aaPredicted RBP17.75■□□□□ 0.43
SRGAP3-212ENST00000520860 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
SRGAP3-212ENST00000520860 CC2D2BQ6DHV5 1058 aa17.75■□□□□ 0.43
SRGAP3-212ENST00000520860 IL17REQ8NFR9 667 aa17.75■□□□□ 0.43
SRGAP3-212ENST00000520860 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
SRGAP3-212ENST00000520860 PIP4K2AP48426 406 aaPredicted RBP17.74■□□□□ 0.43
SRGAP3-212ENST00000520860 SAPCD2Q86UD0 394 aa17.74■□□□□ 0.43
SRGAP3-212ENST00000520860 LARGE2Q8N3Y3 721 aa17.74■□□□□ 0.43
SRGAP3-212ENST00000520860 GAS2L2Q8NHY3 880 aa17.74■□□□□ 0.43
SRGAP3-212ENST00000520860 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
SRGAP3-212ENST00000520860 HHIPL1Q96JK4 782 aa17.73■□□□□ 0.43
SRGAP3-212ENST00000520860 RGL2O15211 777 aa17.72■□□□□ 0.43
SRGAP3-212ENST00000520860 USP16Q9Y5T5 823 aa17.72■□□□□ 0.43
SRGAP3-212ENST00000520860 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
SRGAP3-212ENST00000520860 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
SRGAP3-212ENST00000520860 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms