RNA–Protein interactions for RNA: ENST00000520693.5

CDKL3-205, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2

Gene CDKL3, Length 1,417 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-205ENST00000520693 ALAS2P22557 587 aa8.78□□□□□ -1
CDKL3-205ENST00000520693 EPHA4P54764 986 aa8.78□□□□□ -1
CDKL3-205ENST00000520693 WWC1Q8IX03 1113 aa8.78□□□□□ -1
CDKL3-205ENST00000520693 Q8N3U1 123 aa8.78□□□□□ -1
CDKL3-205ENST00000520693 PLVAPQ9BX97 442 aa8.78□□□□□ -1
CDKL3-205ENST00000520693 PARP3Q9Y6F1 533 aa8.78□□□□□ -1
CDKL3-205ENST00000520693 SIN3BO75182 1162 aa8.77□□□□□ -1.01
CDKL3-205ENST00000520693 NOS2P35228 1153 aa8.77□□□□□ -1.01
CDKL3-205ENST00000520693 PSME1Q06323 249 aa8.77□□□□□ -1.01
CDKL3-205ENST00000520693 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
CDKL3-205ENST00000520693 ADARB2-AS1A8MUL3 147 aa8.76□□□□□ -1.01
CDKL3-205ENST00000520693 NCOA4Q13772 614 aa8.76□□□□□ -1.01
CDKL3-205ENST00000520693 SYT9Q86SS6 491 aa8.76□□□□□ -1.01
CDKL3-205ENST00000520693 ERCC6Q03468 1493 aa8.76□□□□□ -1.01
CDKL3-205ENST00000520693 GATA4P43694 442 aa8.75□□□□□ -1.01
CDKL3-205ENST00000520693 LRRC69Q6ZNQ3 347 aa8.75□□□□□ -1.01
CDKL3-205ENST00000520693 SLC9A9Q8IVB4 645 aa8.75□□□□□ -1.01
CDKL3-205ENST00000520693 NEUROD4Q9HD90 331 aa8.75□□□□□ -1.01
CDKL3-205ENST00000520693 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
CDKL3-205ENST00000520693 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
CDKL3-205ENST00000520693 ZCCHC6Q5VYS8 1495 aaKnown RBP8.74□□□□□ -1.01
CDKL3-205ENST00000520693 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
CDKL3-205ENST00000520693 USP17L5A8MUK1 530 aa8.73□□□□□ -1.01
CDKL3-205ENST00000520693 TNFRSF25Q93038 417 aa8.73□□□□□ -1.01
CDKL3-205ENST00000520693 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
CDKL3-205ENST00000520693 ZNF232Q9UNY5 417 aa8.73□□□□□ -1.01
CDKL3-205ENST00000520693 PRRT3Q5FWE3 981 aa8.72□□□□□ -1.01
CDKL3-205ENST00000520693 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.01
CDKL3-205ENST00000520693 NEUROD1Q13562 356 aa8.71□□□□□ -1.01
CDKL3-205ENST00000520693 DOC2BQ14184 412 aa8.71□□□□□ -1.01
CDKL3-205ENST00000520693 C1orf53Q5VUE5 145 aa8.71□□□□□ -1.01
CDKL3-205ENST00000520693 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.01
CDKL3-205ENST00000520693 TNS4Q8IZW8 715 aa8.71□□□□□ -1.01
CDKL3-205ENST00000520693 THOC2Q8NI27 1593 aaKnown RBP8.71□□□□□ -1.01
CDKL3-205ENST00000520693 ITGB7P26010 798 aa8.71□□□□□ -1.02
CDKL3-205ENST00000520693 ATP1A2P50993 1020 aa8.71□□□□□ -1.02
CDKL3-205ENST00000520693 PSMA6P60900 246 aaKnown RBP8.71□□□□□ -1.02
CDKL3-205ENST00000520693 POTEAQ6S8J7 498 aa8.71□□□□□ -1.02
CDKL3-205ENST00000520693 RHPN1Q8TCX5 695 aa8.71□□□□□ -1.02
CDKL3-205ENST00000520693 SEMA6BQ9H3T3 888 aa8.71□□□□□ -1.02
CDKL3-205ENST00000520693 ANKIB1Q9P2G1 1089 aa8.71□□□□□ -1.02
CDKL3-205ENST00000520693 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
CDKL3-205ENST00000520693 DEPDC4Q8N2C3 294 aa8.7□□□□□ -1.02
CDKL3-205ENST00000520693 SLC30A3Q99726 388 aa8.7□□□□□ -1.02
CDKL3-205ENST00000520693 CHMP3Q9Y3E7 222 aa8.7□□□□□ -1.02
CDKL3-205ENST00000520693 M0R082 166 aa8.69□□□□□ -1.02
CDKL3-205ENST00000520693 M0R2N6 131 aa8.69□□□□□ -1.02
CDKL3-205ENST00000520693 APBA3O96018 575 aa8.69□□□□□ -1.02
CDKL3-205ENST00000520693 KCNQ4P56696 695 aa8.69□□□□□ -1.02
CDKL3-205ENST00000520693 TBCELQ5QJ74 424 aa8.69□□□□□ -1.02
CDKL3-205ENST00000520693 ZNF417Q8TAU3 575 aa8.69□□□□□ -1.02
CDKL3-205ENST00000520693 ZNF587Q96SQ5 575 aaPredicted RBP8.69□□□□□ -1.02
CDKL3-205ENST00000520693 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
CDKL3-205ENST00000520693 SPEM2Q0P670 501 aa8.68□□□□□ -1.02
CDKL3-205ENST00000520693 COL9A3Q14050 684 aaPredicted RBP8.68□□□□□ -1.02
CDKL3-205ENST00000520693 CCDC102BQ68D86 513 aa8.68□□□□□ -1.02
CDKL3-205ENST00000520693 TPCN2Q8NHX9 752 aa8.68□□□□□ -1.02
CDKL3-205ENST00000520693 NACC1Q96RE7 527 aa8.68□□□□□ -1.02
CDKL3-205ENST00000520693 STARD13Q9Y3M8 1113 aa8.68□□□□□ -1.02
CDKL3-205ENST00000520693 RAD21O60216 631 aa8.67□□□□□ -1.02
CDKL3-205ENST00000520693 ADH7P40394 386 aa8.67□□□□□ -1.02
CDKL3-205ENST00000520693 SH3PXD2AQ5TCZ1 1133 aa8.67□□□□□ -1.02
CDKL3-205ENST00000520693 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
CDKL3-205ENST00000520693 NCAPD3P42695 1498 aa8.66□□□□□ -1.02
CDKL3-205ENST00000520693 RSPO4Q2I0M5 234 aaPredicted RBP8.66□□□□□ -1.02
CDKL3-205ENST00000520693 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
CDKL3-205ENST00000520693 BRD7Q9NPI1 651 aa8.66□□□□□ -1.02
CDKL3-205ENST00000520693 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
CDKL3-205ENST00000520693 USP17L3A6NCW0 530 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 USP17L4A6NCW7 530 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 ALBP02768 609 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 CLDN10P78369 228 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
CDKL3-205ENST00000520693 USP17L2Q6R6M4 530 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 USP17L1Q7RTZ2 530 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 CEP63Q96MT8 703 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 TSPAN10Q9H1Z9 355 aaPredicted RBP8.65□□□□□ -1.02
CDKL3-205ENST00000520693 KCNH4Q9UQ05 1017 aa8.65□□□□□ -1.02
CDKL3-205ENST00000520693 PALM3A6NDB9 673 aaPredicted RBP8.64□□□□□ -1.03
CDKL3-205ENST00000520693 NID1P14543 1247 aa8.64□□□□□ -1.03
CDKL3-205ENST00000520693 NKAPLQ5M9Q1 402 aa8.64□□□□□ -1.03
CDKL3-205ENST00000520693 ZMYM1Q5SVZ6 1142 aa8.64□□□□□ -1.03
CDKL3-205ENST00000520693 POM121Q96HA1 1249 aa8.64□□□□□ -1.03
CDKL3-205ENST00000520693 PHACTR1Q9C0D0 580 aa8.64□□□□□ -1.03
CDKL3-205ENST00000520693 ATP9BO43861 1147 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 TYRO3Q06418 890 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 C20orf204Q6ZNR8 217 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 SIX5Q8N196 739 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 EFCC1Q9HA90 598 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 TPSG1Q9NRR2 321 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 SFI1A8K8P3 1242 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 HIF1AQ16665 826 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 STAG2Q8N3U4 1231 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 OGFOD1Q8N543 542 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 HSH2DQ96JZ2 352 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 SUSD3Q96L08 255 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 HCN4Q9Y3Q4 1203 aa8.63□□□□□ -1.03
CDKL3-205ENST00000520693 FLIIQ13045 1269 aa8.62□□□□□ -1.03
CDKL3-205ENST00000520693 UCN2Q96RP3 112 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms