RNA–Protein interactions for RNA: ENST00000520668.1

CDH12-205, Transcript of cadherin 12, humanhuman

TSL 4

Gene CDH12, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-205ENST00000520668 BAP1Q92560 729 aa9.49□□□□□ -0.89
CDH12-205ENST00000520668 CENPJQ9HC77 1338 aaPredicted RBP9.49□□□□□ -0.89
CDH12-205ENST00000520668 SOCS7O14512 581 aa9.48□□□□□ -0.89
CDH12-205ENST00000520668 CD2BP2O95400 341 aaKnown RBP9.48□□□□□ -0.89
CDH12-205ENST00000520668 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
CDH12-205ENST00000520668 GTF3C3Q9Y5Q9 886 aa9.48□□□□□ -0.89
CDH12-205ENST00000520668 NRKQ7Z2Y5 1582 aa9.48□□□□□ -0.89
CDH12-205ENST00000520668 PHRF1Q9P1Y6 1649 aaKnown RBP9.48□□□□□ -0.89
CDH12-205ENST00000520668 SKOR1P84550 965 aa9.47□□□□□ -0.89
CDH12-205ENST00000520668 ZNF598Q86UK7 904 aaKnown RBP9.47□□□□□ -0.89
CDH12-205ENST00000520668 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
CDH12-205ENST00000520668 PLCH1Q4KWH8 1693 aa9.46□□□□□ -0.89
CDH12-205ENST00000520668 MON2Q7Z3U7 1717 aa9.46□□□□□ -0.89
CDH12-205ENST00000520668 SH3BP2P78314 561 aa9.46□□□□□ -0.9
CDH12-205ENST00000520668 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.9
CDH12-205ENST00000520668 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
CDH12-205ENST00000520668 PIK3C2AO00443 1686 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 MYOM1P52179 1685 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 FLIIQ13045 1269 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 ZNF511Q8NB15 262 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 ARMC2Q8NEN0 867 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
CDH12-205ENST00000520668 CARD11Q9BXL7 1154 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 NPHP3Q7Z494 1330 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 TNS3Q68CZ2 1445 aa9.45□□□□□ -0.9
CDH12-205ENST00000520668 KRT28Q7Z3Y7 464 aa9.44□□□□□ -0.9
CDH12-205ENST00000520668 LRRC59Q96AG4 307 aaKnown RBP9.44□□□□□ -0.9
CDH12-205ENST00000520668 SPATA31A6Q5VVP1 1343 aa9.44□□□□□ -0.9
CDH12-205ENST00000520668 SPATA31A3Q5VYP0 1347 aa9.44□□□□□ -0.9
CDH12-205ENST00000520668 POLR3AO14802 1390 aaPredicted RBP9.44□□□□□ -0.9
CDH12-205ENST00000520668 PPIP5K1Q6PFW1 1433 aa9.44□□□□□ -0.9
CDH12-205ENST00000520668 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
CDH12-205ENST00000520668 NRAPQ86VF7 1730 aa9.43□□□□□ -0.9
CDH12-205ENST00000520668 SBNO2Q9Y2G9 1366 aa9.43□□□□□ -0.9
CDH12-205ENST00000520668 GPR37L1O60883 481 aa9.43□□□□□ -0.9
CDH12-205ENST00000520668 WNT7BP56706 349 aa9.43□□□□□ -0.9
CDH12-205ENST00000520668 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
CDH12-205ENST00000520668 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
CDH12-205ENST00000520668 TESK2Q96S53 571 aa9.43□□□□□ -0.9
CDH12-205ENST00000520668 SBNO1A3KN83 1393 aa9.42□□□□□ -0.9
CDH12-205ENST00000520668 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
CDH12-205ENST00000520668 ACEP12821 1306 aa9.42□□□□□ -0.9
CDH12-205ENST00000520668 TBC1D2BQ9UPU7 963 aa9.42□□□□□ -0.9
CDH12-205ENST00000520668 NDUFB9Q9Y6M9 179 aa9.42□□□□□ -0.9
CDH12-205ENST00000520668 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.42□□□□□ -0.9
CDH12-205ENST00000520668 SSH2Q76I76 1423 aa9.41□□□□□ -0.9
CDH12-205ENST00000520668 USP47Q96K76 1375 aa9.41□□□□□ -0.9
CDH12-205ENST00000520668 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
CDH12-205ENST00000520668 APBB1O00213 710 aa9.41□□□□□ -0.9
CDH12-205ENST00000520668 RC3H1Q5TC82 1133 aaKnown RBP9.41□□□□□ -0.9
CDH12-205ENST00000520668 NBPF14Q5TI25 921 aa9.41□□□□□ -0.9
CDH12-205ENST00000520668 GPKOWQ92917 476 aaPredicted RBP eCLIP9.41□□□□□ -0.9
CDH12-205ENST00000520668 PKD2L1Q9P0L9 805 aa9.41□□□□□ -0.9
CDH12-205ENST00000520668 RGPD5Q99666 1765 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
CDH12-205ENST00000520668 GDF9O60383 454 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 ADAMTS2O95450 1211 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
CDH12-205ENST00000520668 FOXC1Q12948 553 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 TRIM67Q6ZTA4 783 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 SH3BP5LQ7L8J4 393 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 SH3RF1Q7Z6J0 888 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 POM121Q96HA1 1249 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 GDPD2Q9HCC8 539 aa9.4□□□□□ -0.9
CDH12-205ENST00000520668 USP6P35125 1406 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 NWD2Q9ULI1 1742 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 PSME1Q06323 249 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 OCSTAMPQ9BR26 566 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 COG6Q9Y2V7 657 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 BCL9LQ86UU0 1499 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 CPSF1Q10570 1443 aaKnown RBP9.39□□□□□ -0.91
CDH12-205ENST00000520668 LMO7Q8WWI1 1683 aa9.39□□□□□ -0.91
CDH12-205ENST00000520668 GLI3P10071 1580 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 AFF2P51816 1311 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 EVC2Q86UK5 1308 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 COL18A1P39060 1754 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 WNT7AO00755 349 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 NGDNQ8NEJ9 315 aaKnown RBP9.38□□□□□ -0.91
CDH12-205ENST00000520668 MRGPRX2Q96LB1 330 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 C8orf37Q96NL8 207 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 EP400Q96L91 3159 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 BRWD3Q6RI45 1802 aa9.38□□□□□ -0.91
CDH12-205ENST00000520668 COL14A1Q05707 1796 aaKnown RBP9.37□□□□□ -0.91
CDH12-205ENST00000520668 SLIT2O94813 1529 aa9.37□□□□□ -0.91
CDH12-205ENST00000520668 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
CDH12-205ENST00000520668 AGERQ15109 404 aa9.37□□□□□ -0.91
CDH12-205ENST00000520668 MEX3CQ5U5Q3 659 aaKnown RBP9.37□□□□□ -0.91
CDH12-205ENST00000520668 NUTM2GQ5VZR2 741 aa9.37□□□□□ -0.91
CDH12-205ENST00000520668 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
CDH12-205ENST00000520668 EHBP1Q8NDI1 1231 aa9.37□□□□□ -0.91
CDH12-205ENST00000520668 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
CDH12-205ENST00000520668 SLIT3O75094 1523 aa9.36□□□□□ -0.91
CDH12-205ENST00000520668 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms