RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 PRELPP51888 382 aa11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 DZIP3Q86Y13 1208 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 RRAGCQ9HB90 399 aa11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 LTBP3Q9NS15 1303 aa11.86□□□□□ -0.51
CTNNA1-224ENST00000520522 FER1L6Q2WGJ9 1857 aa11.85□□□□□ -0.51
CTNNA1-224ENST00000520522 ST5P78524 1137 aa11.85□□□□□ -0.51
CTNNA1-224ENST00000520522 MCM10Q7L590 875 aa11.85□□□□□ -0.51
CTNNA1-224ENST00000520522 DNAJC5GQ8N7S2 189 aa11.85□□□□□ -0.51
CTNNA1-224ENST00000520522 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
CTNNA1-224ENST00000520522 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
CTNNA1-224ENST00000520522 STYK1Q6J9G0 422 aa11.84□□□□□ -0.51
CTNNA1-224ENST00000520522 SMC1BQ8NDV3 1235 aa11.84□□□□□ -0.51
CTNNA1-224ENST00000520522 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
CTNNA1-224ENST00000520522 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
CTNNA1-224ENST00000520522 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
CTNNA1-224ENST00000520522 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-224ENST00000520522 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.52
CTNNA1-224ENST00000520522 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
CTNNA1-224ENST00000520522 NPHP1O15259 732 aa11.83□□□□□ -0.52
CTNNA1-224ENST00000520522 SRGNP10124 158 aa11.83□□□□□ -0.52
CTNNA1-224ENST00000520522 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-224ENST00000520522 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-224ENST00000520522 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
CTNNA1-224ENST00000520522 C21orf2O43822 256 aa11.82□□□□□ -0.52
CTNNA1-224ENST00000520522 NEFMP07197 916 aa11.82□□□□□ -0.52
CTNNA1-224ENST00000520522 PIP4K2AP48426 406 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-224ENST00000520522 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
CTNNA1-224ENST00000520522 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
CTNNA1-224ENST00000520522 MASTLQ96GX5 879 aa11.82□□□□□ -0.52
CTNNA1-224ENST00000520522 SLX4Q8IY92 1834 aa11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 NBPF5PQ86XG9 351 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
CTNNA1-224ENST00000520522 DLG5Q8TDM6 1919 aa11.8□□□□□ -0.52
CTNNA1-224ENST00000520522 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
CTNNA1-224ENST00000520522 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
CTNNA1-224ENST00000520522 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-224ENST00000520522 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 POTECB2RU33 542 aa11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 NPR1P16066 1061 aa11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 PLEKHF1Q96S99 279 aa11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 NIP7Q9Y221 180 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTNNA1-224ENST00000520522 HTRA3P83110 453 aa11.78□□□□□ -0.52
CTNNA1-224ENST00000520522 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
CTNNA1-224ENST00000520522 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
CTNNA1-224ENST00000520522 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-224ENST00000520522 IBTKQ9P2D0 1353 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-224ENST00000520522 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.52
CTNNA1-224ENST00000520522 ERVV-1B6SEH8 477 aa11.77□□□□□ -0.53
CTNNA1-224ENST00000520522 EIF4A1P60842 406 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-224ENST00000520522 PCNTO95613 3336 aa11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 HLFQ16534 295 aa11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 NYXQ9GZU5 481 aa11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 MIS18AQ9NYP9 233 aa11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
CTNNA1-224ENST00000520522 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
CTNNA1-224ENST00000520522 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
CTNNA1-224ENST00000520522 RTKN2Q8IZC4 609 aa11.75□□□□□ -0.53
CTNNA1-224ENST00000520522 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-224ENST00000520522 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
CTNNA1-224ENST00000520522 NUP98P52948 1817 aa11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 IQCA1LA6NCM1 817 aa11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 CAPN15O75808 1086 aa11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 DDNO94850 711 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 GTF2E1P29083 439 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 SNED1Q8TER0 1413 aa11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 SCN4AP35499 1836 aa11.74□□□□□ -0.53
CTNNA1-224ENST00000520522 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
CTNNA1-224ENST00000520522 RALBP1Q15311 655 aa11.73□□□□□ -0.53
CTNNA1-224ENST00000520522 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-224ENST00000520522 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
CTNNA1-224ENST00000520522 UBN2Q6ZU65 1347 aa11.72□□□□□ -0.53
CTNNA1-224ENST00000520522 CC2D2BQ6DHV5 1058 aa11.72□□□□□ -0.53
CTNNA1-224ENST00000520522 GIGYF2Q6Y7W6 1299 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-224ENST00000520522 TTLL7Q6ZT98 887 aa11.72□□□□□ -0.53
CTNNA1-224ENST00000520522 NGEFQ8N5V2 710 aa11.72□□□□□ -0.53
CTNNA1-224ENST00000520522 PSMD1Q99460 953 aa11.72□□□□□ -0.53
CTNNA1-224ENST00000520522 ZNF277Q9NRM2 450 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-224ENST00000520522 RRP7AQ9Y3A4 280 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms