RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 DLEC1Q9Y238 1755 aa7.59□□□□□ -1.2
CTNNA1-219ENST00000520158 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 HTATSF1O43719 755 aaKnown RBP7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 SERPINB2P05120 415 aa7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 TEFQ10587 303 aa7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 TTC5Q8N0Z6 440 aa7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 PHACTR3Q96KR7 559 aa7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 CFAP53Q96M91 514 aa7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 FMNL2Q96PY5 1086 aa7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 WWC3Q9ULE0 1092 aa7.58□□□□□ -1.2
CTNNA1-219ENST00000520158 U2SURPO15042 1029 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 PPP2R1AP30153 589 aa7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 CHRNA5P30532 468 aa7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 C9orf131Q5VYM1 1079 aa7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 RBM46Q8TBY0 533 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 ZNF526Q8TF50 670 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 PKNOX2Q96KN3 472 aa7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 BRIP1Q9BX63 1249 aa7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 NUDCQ9Y266 331 aa7.57□□□□□ -1.2
CTNNA1-219ENST00000520158 CEP350Q5VT06 3117 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 NEFLP07196 543 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 CANXP27824 592 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 PRKAR2BP31323 418 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 APLP1P51693 650 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 TPRNQ4KMQ1 711 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 CLEC4GQ6UXB4 293 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 DNAJC5GQ8N7S2 189 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 TTLL6Q8N841 843 aa7.56□□□□□ -1.2
CTNNA1-219ENST00000520158 KDM2BQ8NHM5 1336 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 SCN7AQ01118 1682 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 KLRG2A4D1S0 409 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 H0YIN7 160 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 CAMTA2O94983 1202 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 PDE6BP35913 854 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 PDE4CQ08493 712 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 FSTL1Q12841 308 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 TBC1D9BQ66K14 1250 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 NMRK2Q9NPI5 230 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 USP16Q9Y5T5 823 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 ANKRD31Q8N7Z5 1873 aa7.55□□□□□ -1.2
CTNNA1-219ENST00000520158 LTBP3Q9NS15 1303 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 GLTPD2A6NH11 291 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 KCNQ3O43525 872 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 A1BGP04217 495 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 SNRPA1P09661 255 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 POTEJP0CG39 1038 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 U2AF1L5P0DN76 240 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 LMNB1P20700 586 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 PRELPP51888 382 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 U2AF1Q01081 240 aaKnown RBP eCLIP7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 TAF7Q15545 349 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 PRR5LQ6MZQ0 368 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 C2CD5Q86YS7 1000 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 RNF181Q9P0P0 153 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 FBXO3Q9UK99 471 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 TBC1D2BQ9UPU7 963 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 CARMIL3Q8ND23 1372 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 TNRC6CQ9HCJ0 1690 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 BCORQ6W2J9 1755 aa7.54□□□□□ -1.2
CTNNA1-219ENST00000520158 DICER1Q9UPY3 1922 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 NFKBIEO00221 500 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 SRGNP10124 158 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 IFFO2Q5TF58 517 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 STYK1Q6J9G0 422 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 RTF1Q92541 710 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 PLEKHF1Q96S99 279 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 SETDB2Q96T68 719 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 ANP32EQ9BTT0 268 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 FER1L6Q2WGJ9 1857 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 CCDC88AQ3V6T2 1871 aa7.53□□□□□ -1.2
CTNNA1-219ENST00000520158 POTECB2RU33 542 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 NBPF26B4DH59 902 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 VEGFAP15692 232 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 MCM10Q7L590 875 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 DZIP3Q86Y13 1208 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 JMYQ8N9B5 988 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 PNISRQ8TF01 805 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 CNKSR1Q969H4 720 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 RRAGCQ9HB90 399 aa7.52□□□□□ -1.21
CTNNA1-219ENST00000520158 ARFGEF2Q9Y6D5 1785 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 PRAMEF22A3QJZ6 481 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 ERVV-1B6SEH8 477 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 RASSF7Q02833 373 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 SOGA3Q5TF21 947 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 BICDL1Q6ZP65 573 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 CNBD1Q8NA66 436 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 MASTLQ96GX5 879 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 PNNQ9H307 717 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 ZNF652Q9Y2D9 606 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 WDR90Q96KV7 1748 aa7.51□□□□□ -1.21
CTNNA1-219ENST00000520158 DLG5Q8TDM6 1919 aa7.5□□□□□ -1.21
CTNNA1-219ENST00000520158 SLX4Q8IY92 1834 aa7.5□□□□□ -1.21
CTNNA1-219ENST00000520158 COL11A2P13942 1736 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-219ENST00000520158 ST5P78524 1137 aa7.5□□□□□ -1.21
CTNNA1-219ENST00000520158 TPTE2Q6XPS3 522 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms