RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 SLC27A3Q5K4L6 730 aa27.16■■□□□ 1.94
PTP4A3-203ENST00000520105 NPM2Q86SE8 214 aaKnown RBP27.15■■□□□ 1.94
PTP4A3-203ENST00000520105 RC3H1Q5TC82 1133 aaKnown RBP27.15■■□□□ 1.94
PTP4A3-203ENST00000520105 SRCIN1Q9C0H9 1055 aa27.15■■□□□ 1.94
PTP4A3-203ENST00000520105 RREB1Q92766 1687 aa27.14■■□□□ 1.94
PTP4A3-203ENST00000520105 TNS1Q9HBL0 1735 aaKnown RBP27.14■■□□□ 1.94
PTP4A3-203ENST00000520105 SMIM5Q71RC9 77 aa27.14■■□□□ 1.94
PTP4A3-203ENST00000520105 METTL22Q9BUU2 404 aaPredicted RBP27.14■■□□□ 1.94
PTP4A3-203ENST00000520105 TBC1D2BQ9UPU7 963 aa27.14■■□□□ 1.94
PTP4A3-203ENST00000520105 PXDNLA1KZ92 1463 aa27.13■■□□□ 1.93
PTP4A3-203ENST00000520105 ZBTB40Q9NUA8 1239 aa27.13■■□□□ 1.93
PTP4A3-203ENST00000520105 CWF19L2Q2TBE0 894 aaKnown RBP27.13■■□□□ 1.93
PTP4A3-203ENST00000520105 KIF6Q6ZMV9 814 aa27.13■■□□□ 1.93
PTP4A3-203ENST00000520105 MYD88Q99836 296 aa27.13■■□□□ 1.93
PTP4A3-203ENST00000520105 DZIP3Q86Y13 1208 aaKnown RBP27.12■■□□□ 1.93
PTP4A3-203ENST00000520105 GNPATO15228 680 aa27.11■■□□□ 1.93
PTP4A3-203ENST00000520105 B4GALNT3Q6L9W6 998 aa27.11■■□□□ 1.93
PTP4A3-203ENST00000520105 MEIS3Q99687 375 aa27.11■■□□□ 1.93
PTP4A3-203ENST00000520105 ARFGEF2Q9Y6D5 1785 aa27.11■■□□□ 1.93
PTP4A3-203ENST00000520105 IGKV5-2P06315 115 aa27.1■■□□□ 1.93
PTP4A3-203ENST00000520105 MAP3K15Q6ZN16 1313 aa27.1■■□□□ 1.93
PTP4A3-203ENST00000520105 ATP10DQ9P241 1426 aa27.1■■□□□ 1.93
PTP4A3-203ENST00000520105 RPS6KA4O75676 772 aa27.1■■□□□ 1.93
PTP4A3-203ENST00000520105 NEXNQ0ZGT2 675 aa27.1■■□□□ 1.93
PTP4A3-203ENST00000520105 LINS1Q8NG48 757 aa27.1■■□□□ 1.93
PTP4A3-203ENST00000520105 C4BP0C0L5 1744 aa27.09■■□□□ 1.93
PTP4A3-203ENST00000520105 ATP5J2-PTCD1G3V325 749 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 HLFQ16534 295 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 AMIGO3Q86WK7 504 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 USP44Q9H0E7 712 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 COL15A1P39059 1388 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 NUP188Q5SRE5 1749 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 EN1Q05925 392 aaPredicted RBP27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 AAMPQ13685 434 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 CCDC136Q96JN2 1154 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 CHMP4BQ9H444 224 aaKnown RBP27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 C1orf115Q9H7X2 142 aa27.08■■□□□ 1.93
PTP4A3-203ENST00000520105 N4BP2Q86UW6 1770 aaPredicted RBP27.07■■□□□ 1.92
PTP4A3-203ENST00000520105 ALDH1L1O75891 902 aa27.07■■□□□ 1.92
PTP4A3-203ENST00000520105 AK7Q96M32 723 aa27.07■■□□□ 1.92
PTP4A3-203ENST00000520105 RTCBQ9Y3I0 505 aaKnown RBP27.07■■□□□ 1.92
PTP4A3-203ENST00000520105 PCDHB15Q9Y5E8 787 aa27.07■■□□□ 1.92
PTP4A3-203ENST00000520105 NEURL1BA8MQ27 555 aa27.06■■□□□ 1.92
PTP4A3-203ENST00000520105 GIGYF2Q6Y7W6 1299 aaKnown RBP27.05■■□□□ 1.92
PTP4A3-203ENST00000520105 ERVV-1B6SEH8 477 aa27.04■■□□□ 1.92
PTP4A3-203ENST00000520105 TCIRG1Q13488 830 aa27.04■■□□□ 1.92
PTP4A3-203ENST00000520105 EZH2Q15910 746 aaKnown RBP27.04■■□□□ 1.92
PTP4A3-203ENST00000520105 CAMTA2O94983 1202 aa27.04■■□□□ 1.92
PTP4A3-203ENST00000520105 SF3B2Q13435 895 aaKnown RBP27.04■■□□□ 1.92
PTP4A3-203ENST00000520105 CAMKK2Q96RR4 588 aa27.04■■□□□ 1.92
PTP4A3-203ENST00000520105 A0A087WZG4 1122 aa27.03■■□□□ 1.92
PTP4A3-203ENST00000520105 PHF14O94880 888 aa27.03■■□□□ 1.92
PTP4A3-203ENST00000520105 NBPF7P0C2Y1 421 aaPredicted RBP27.03■■□□□ 1.92
PTP4A3-203ENST00000520105 GCKRQ14397 625 aa27.02■■□□□ 1.92
PTP4A3-203ENST00000520105 C9orf78Q9NZ63 289 aaPredicted RBP27.02■■□□□ 1.92
PTP4A3-203ENST00000520105 GNAI3P08754 354 aa27.02■■□□□ 1.92
PTP4A3-203ENST00000520105 DEFB132Q7Z7B7 95 aa27.02■■□□□ 1.92
PTP4A3-203ENST00000520105 ARHGEF1Q92888 912 aaKnown RBP27.02■■□□□ 1.92
PTP4A3-203ENST00000520105 NUP98P52948 1817 aa27.01■■□□□ 1.91
PTP4A3-203ENST00000520105 ISCA1Q9BUE6 129 aa27■■□□□ 1.91
PTP4A3-203ENST00000520105 UBTFL1P0CB47 393 aaPredicted RBP27■■□□□ 1.91
PTP4A3-203ENST00000520105 GPTP24298 496 aa27■■□□□ 1.91
PTP4A3-203ENST00000520105 TRAPPC3LQ5T215 181 aa27■■□□□ 1.91
PTP4A3-203ENST00000520105 AFDNP55196 1824 aaKnown RBP26.99■■□□□ 1.91
PTP4A3-203ENST00000520105 RGPD3A6NKT7 1758 aaPredicted RBP26.99■■□□□ 1.91
PTP4A3-203ENST00000520105 RGPD4Q7Z3J3 1758 aa26.99■■□□□ 1.91
PTP4A3-203ENST00000520105 GRM8O00222 908 aa26.99■■□□□ 1.91
PTP4A3-203ENST00000520105 BAG6P46379 1132 aa26.99■■□□□ 1.91
PTP4A3-203ENST00000520105 SRP68Q9UHB9 627 aaKnown RBP26.99■■□□□ 1.91
PTP4A3-203ENST00000520105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 HMGB2P26583 209 aaKnown RBP26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 ZNF827Q17R98 1081 aa26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 JARID2Q92833 1246 aaPredicted RBP26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 UBR3Q6ZT12 1888 aa26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 GNAI2P04899 355 aa26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 HSP90AB3PQ58FF7 597 aa26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 CCDC191Q8NCU4 936 aa26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 CWC25Q9NXE8 425 aaPredicted RBP26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 NARFQ9UHQ1 456 aa26.98■■□□□ 1.91
PTP4A3-203ENST00000520105 IGHDP01880 384 aa26.97■■□□□ 1.91
PTP4A3-203ENST00000520105 USPL1Q5W0Q7 1092 aa26.97■■□□□ 1.91
PTP4A3-203ENST00000520105 AKT1S1Q96B36 256 aa26.97■■□□□ 1.91
PTP4A3-203ENST00000520105 LRRFIP2Q9Y608 721 aaKnown RBP26.97■■□□□ 1.91
PTP4A3-203ENST00000520105 RFC4P35249 363 aa26.96■■□□□ 1.91
PTP4A3-203ENST00000520105 TRIM28Q13263 835 aaKnown RBP26.96■■□□□ 1.91
PTP4A3-203ENST00000520105 ZPR1O75312 459 aa26.96■■□□□ 1.91
PTP4A3-203ENST00000520105 UTYO14607 1347 aa26.95■■□□□ 1.91
PTP4A3-203ENST00000520105 ZNF34Q8IZ26 560 aa26.95■■□□□ 1.9
PTP4A3-203ENST00000520105 BCL2L12Q9HB09 334 aa26.95■■□□□ 1.9
PTP4A3-203ENST00000520105 TFCP2L1Q9NZI6 479 aa26.95■■□□□ 1.9
PTP4A3-203ENST00000520105 RTL5Q5HYW3 569 aaPredicted RBP26.94■■□□□ 1.9
PTP4A3-203ENST00000520105 SIRT2Q8IXJ6 389 aa26.94■■□□□ 1.9
PTP4A3-203ENST00000520105 IBTKQ9P2D0 1353 aaPredicted RBP26.94■■□□□ 1.9
PTP4A3-203ENST00000520105 ADRA2BP18089 450 aa26.93■■□□□ 1.9
PTP4A3-203ENST00000520105 SSFA2P28290 1259 aa26.93■■□□□ 1.9
PTP4A3-203ENST00000520105 CLEC4GQ6UXB4 293 aa26.93■■□□□ 1.9
PTP4A3-203ENST00000520105 UBE3BQ7Z3V4 1068 aa26.93■■□□□ 1.9
PTP4A3-203ENST00000520105 NLRP10Q86W26 655 aa26.93■■□□□ 1.9
PTP4A3-203ENST00000520105 CCDC125Q86Z20 511 aa26.93■■□□□ 1.9
PTP4A3-203ENST00000520105 ZNF652Q9Y2D9 606 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms