RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 PIK3CDO00329 1044 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 ANP32CO43423 234 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 GIGYF1O75420 1035 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-212ENST00000519622 SOX11P35716 441 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 NBPF20Q3BBV1 942 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 CALR3Q96L12 384 aaKnown RBP6.28□□□□□ -1.4
PABPC1-212ENST00000519622 C1orf115Q9H7X2 142 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 PGPEP1Q9NXJ5 209 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 MYO3AQ8NEV4 1616 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 NRXN1Q9ULB1 1477 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 SIGLEC1Q9BZZ2 1709 aa6.28□□□□□ -1.4
PABPC1-212ENST00000519622 CCDC144AA2RUR9 1427 aa6.27□□□□□ -1.41
PABPC1-212ENST00000519622 ADGRB3O60242 1522 aa6.27□□□□□ -1.41
PABPC1-212ENST00000519622 SPINT1O43278 529 aa6.27□□□□□ -1.41
PABPC1-212ENST00000519622 GPR161Q8N6U8 529 aaKnown RBP6.27□□□□□ -1.41
PABPC1-212ENST00000519622 UCN2Q96RP3 112 aa6.27□□□□□ -1.41
PABPC1-212ENST00000519622 CEP126Q9P2H0 1117 aa6.27□□□□□ -1.41
PABPC1-212ENST00000519622 CDV3Q9UKY7 258 aaKnown RBP6.27□□□□□ -1.41
PABPC1-212ENST00000519622 ZNF518AQ6AHZ1 1483 aa6.27□□□□□ -1.41
PABPC1-212ENST00000519622 CFAP74Q9C0B2 1584 aa6.27□□□□□ -1.41
PABPC1-212ENST00000519622 ZC3H13Q5T200 1668 aaKnown RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 ARID4BQ4LE39 1312 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 MAP3K4Q9Y6R4 1608 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 RICTORQ6R327 1708 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 ESPNB1AK53 854 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 TSPY4P0CV99 314 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 TSPY10P0CW01 314 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 ADD1P35611 737 aaKnown RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 CTSOP43234 321 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 MCCD1P59942 119 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 PTSQ03393 145 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 KDF1Q8NAX2 398 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 TESK2Q96S53 571 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 ZNF395Q9H8N7 513 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 LRPPRCP42704 1394 aaKnown RBP6.26□□□□□ -1.41
PABPC1-212ENST00000519622 ADGRL1O94910 1474 aa6.26□□□□□ -1.41
PABPC1-212ENST00000519622 POGZQ7Z3K3 1410 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 PIK3C2BO00750 1634 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 LILRA1O75019 489 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 RELBQ01201 579 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 KRT76Q01546 638 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 DHX9Q08211 1270 aaKnown RBP6.25□□□□□ -1.41
PABPC1-212ENST00000519622 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.25□□□□□ -1.415e-9■□□□□ 10.4
PABPC1-212ENST00000519622 RNF135Q8IUD6 432 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 ZNF784Q8NCA9 323 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-212ENST00000519622 ZNF592Q92610 1267 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 CCDC85AQ96PX6 553 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-212ENST00000519622 INSM2Q96T92 566 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-212ENST00000519622 DISP3Q9P2K9 1392 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 MYOM2P54296 1465 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 DIP2CQ9Y2E4 1556 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 SCAPERQ9BY12 1400 aa6.25□□□□□ -1.41
PABPC1-212ENST00000519622 PPLO60437 1756 aa6.24□□□□□ -1.41
PABPC1-212ENST00000519622 MLH3Q9UHC1 1453 aa6.24□□□□□ -1.41
PABPC1-212ENST00000519622 ERVH48-1M5A8F1 160 aa6.24□□□□□ -1.41
PABPC1-212ENST00000519622 NBPF1Q3BBV0 1214 aa6.24□□□□□ -1.41
PABPC1-212ENST00000519622 TSGA10IPQ3SY00 556 aa6.24□□□□□ -1.41
PABPC1-212ENST00000519622 SLFNL1Q499Z3 407 aa6.24□□□□□ -1.41
PABPC1-212ENST00000519622 EFCAB2Q5VUJ9 269 aa6.24□□□□□ -1.41
PABPC1-212ENST00000519622 SYNMO15061 1565 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 ROCK2O75116 1388 aaKnown RBP6.23□□□□□ -1.41
PABPC1-212ENST00000519622 PARD3Q8TEW0 1356 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 TBC1D9Q6ZT07 1266 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 PHTF2Q8N3S3 785 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 CCDC82Q8N4S0 544 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 AFAP1Q8N556 730 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 CDCA7Q9BWT1 371 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-212ENST00000519622 PCDHB11Q9Y5F2 797 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 CAMSAP1Q5T5Y3 1602 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 ABCC3O15438 1527 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 ADGRB1O14514 1584 aa6.23□□□□□ -1.41
PABPC1-212ENST00000519622 ZMYM4Q5VZL5 1548 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 ST20-MTHFSA0A0A6YYL1 179 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 SLC35F4A4IF30 521 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 SKIP12755 728 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 SEPT12Q8IYM1 358 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 CCDC155Q8N6L0 562 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 PLPP7Q8NBV4 271 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 DOLKQ9UPQ8 538 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 GLI2P10070 1586 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 SPAG9O60271 1321 aaKnown RBP6.22□□□□□ -1.41
PABPC1-212ENST00000519622 ZBED9Q6R2W3 1325 aa6.22□□□□□ -1.41
PABPC1-212ENST00000519622 KIF1BO60333 1816 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 USP17L5A8MUK1 530 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 RNF20Q5VTR2 975 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 DEPDC4Q8N2C3 294 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 RNF217Q8TC41 542 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 DCAF11Q8TEB1 546 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 CARD11Q9BXL7 1154 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 POLMQ9NP87 494 aaPredicted RBP6.21□□□□□ -1.42
PABPC1-212ENST00000519622 CYLDQ9NQC7 956 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 SETBP1Q9Y6X0 1596 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 RNF123Q5XPI4 1314 aa6.21□□□□□ -1.42
PABPC1-212ENST00000519622 ASXL1Q8IXJ9 1541 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 BLMP54132 1417 aaPredicted RBP6.2□□□□□ -1.42
PABPC1-212ENST00000519622 NPATQ14207 1427 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 SMG6Q86US8 1419 aaKnown RBP6.2□□□□□ -1.42
PABPC1-212ENST00000519622 SENP3-EIF4A1A0A087X0R7 540 aa6.2□□□□□ -1.42
PABPC1-212ENST00000519622 PALM3A6NDB9 673 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms