RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 ECHDC1Q9NTX5 307 aa13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 ZKSCAN5Q9Y2L8 839 aa13.64□□□□□ -0.23
NUDCD1-203ENST00000519607 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
NUDCD1-203ENST00000519607 STX6O43752 255 aa13.63□□□□□ -0.23
NUDCD1-203ENST00000519607 ZSCAN22P10073 491 aaPredicted RBP13.63□□□□□ -0.23
NUDCD1-203ENST00000519607 AK2P54819 239 aa13.63□□□□□ -0.23
NUDCD1-203ENST00000519607 ZSCAN31Q96LW9 406 aaPredicted RBP13.63□□□□□ -0.23
NUDCD1-203ENST00000519607 NCAPD2Q15021 1401 aa13.63□□□□□ -0.23
NUDCD1-203ENST00000519607 HIP1O00291 1037 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 FOXD4L6Q3SYB3 417 aaPredicted RBP13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 FOXD4L3Q6VB84 417 aaPredicted RBP13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 KLHL34Q8N239 644 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 PTMAP06454 111 aaKnown RBP13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 PDIA4P13667 645 aaKnown RBP13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 ZKSCAN1P17029 563 aaPredicted RBP13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 EVI5LQ96CN4 794 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 SH2B1Q9NRF2 756 aaPredicted RBP13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 NFAT5O94916 1531 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 CRYBG1Q9Y4K1 1723 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 ADCY9O60503 1353 aa13.62□□□□□ -0.23
NUDCD1-203ENST00000519607 DDX58O95786 925 aaKnown RBP13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 CCDC183Q5T5S1 534 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 VPS53Q5VIR6 699 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 MPRIPQ6WCQ1 1025 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 OVOS2A0A0G2JMS6 1433 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 RNMTO43148 476 aaKnown RBP13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 UBE2HP62256 183 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 TM6SF1Q9BZW5 370 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 GDPD2Q9HCC8 539 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 RGPD2P0DJD1 1756 aa13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 PHRF1Q9P1Y6 1649 aaKnown RBP13.61□□□□□ -0.23
NUDCD1-203ENST00000519607 KCNQ3O43525 872 aa13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 SYT1P21579 422 aa13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 PDRG1Q9NUG6 133 aa13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 F13A1P00488 732 aa13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 ANXA1P04083 346 aa13.6□□□□□ -0.23
NUDCD1-203ENST00000519607 GIGYF1O75420 1035 aaPredicted RBP13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 KCNJ4P48050 445 aa13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 ANKLE2Q86XL3 938 aa13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 PSMA5P28066 241 aa13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 AACSQ86V21 672 aa13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 LINS1Q8NG48 757 aa13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 CNPY2Q9Y2B0 182 aa13.59□□□□□ -0.23
NUDCD1-203ENST00000519607 PRPF40BQ6NWY9 871 aaKnown RBP13.58□□□□□ -0.24
NUDCD1-203ENST00000519607 LRRC59Q96AG4 307 aaKnown RBP13.58□□□□□ -0.24
NUDCD1-203ENST00000519607 ZSWIM6Q9HCJ5 1215 aa13.58□□□□□ -0.24
NUDCD1-203ENST00000519607 GRM8O00222 908 aa13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 RNF20Q5VTR2 975 aa13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 GJB2P29033 226 aa13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 XPCQ01831 940 aaPredicted RBP13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 KCNB2Q92953 911 aa13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
NUDCD1-203ENST00000519607 GCP02774 474 aa13.56□□□□□ -0.24
NUDCD1-203ENST00000519607 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
NUDCD1-203ENST00000519607 PTH1RQ03431 593 aa13.56□□□□□ -0.24
NUDCD1-203ENST00000519607 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
NUDCD1-203ENST00000519607 ANKRD1Q15327 319 aa13.56□□□□□ -0.24
NUDCD1-203ENST00000519607 CWF19L2Q2TBE0 894 aaKnown RBP13.56□□□□□ -0.24
NUDCD1-203ENST00000519607 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
NUDCD1-203ENST00000519607 HEG1Q9ULI3 1381 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 FIBPO43427 364 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 PDCP20941 246 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 NEXNQ0ZGT2 675 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 ARHGEF25Q86VW2 580 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 PA2G4Q9UQ80 394 aaKnown RBP13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 UTYO14607 1347 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 ANKRD24Q8TF21 1146 aa13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
NUDCD1-203ENST00000519607 CPA1P15085 419 aa13.54□□□□□ -0.24
NUDCD1-203ENST00000519607 ADCK5Q3MIX3 580 aa13.54□□□□□ -0.24
NUDCD1-203ENST00000519607 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
NUDCD1-203ENST00000519607 LARP1Q6PKG0 1096 aaKnown RBP13.54□□□□□ -0.24
NUDCD1-203ENST00000519607 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
NUDCD1-203ENST00000519607 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
NUDCD1-203ENST00000519607 PROSER3Q2NL68 480 aa13.53□□□□□ -0.24
NUDCD1-203ENST00000519607 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
NUDCD1-203ENST00000519607 BICC1Q9H694 974 aaKnown RBP13.53□□□□□ -0.24
NUDCD1-203ENST00000519607 VPS37CA5D8V6 355 aaPredicted RBP13.53□□□□□ -0.24
NUDCD1-203ENST00000519607 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
NUDCD1-203ENST00000519607 SUCLG2Q96I99 432 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms