RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TM4SF1P30408 202 aa10.05□□□□□ -0.8
CTNNA1-216ENST00000519489 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-216ENST00000519489 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
CTNNA1-216ENST00000519489 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-216ENST00000519489 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
CTNNA1-216ENST00000519489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.81e-8■□□□□ 8.5
CTNNA1-216ENST00000519489 ZNF541Q9H0D2 1346 aa10.05□□□□□ -0.8
CTNNA1-216ENST00000519489 IQCA1LA6NCM1 817 aa10.04□□□□□ -0.8
CTNNA1-216ENST00000519489 HMGB2P26583 209 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-216ENST00000519489 EPHX2P34913 555 aa10.04□□□□□ -0.8
CTNNA1-216ENST00000519489 TTLL6Q8N841 843 aa10.04□□□□□ -0.8
CTNNA1-216ENST00000519489 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-216ENST00000519489 SPTBN5Q9NRC6 3674 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-216ENST00000519489 KDRP35968 1356 aa10.03□□□□□ -0.8
CTNNA1-216ENST00000519489 RFC4P35249 363 aa10.03□□□□□ -0.8
CTNNA1-216ENST00000519489 CCDC88AQ3V6T2 1871 aa10.03□□□□□ -0.8
CTNNA1-216ENST00000519489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTNNA1-216ENST00000519489 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
CTNNA1-216ENST00000519489 CARMIL3Q8ND23 1372 aa10.02□□□□□ -0.8
CTNNA1-216ENST00000519489 C21orf2O43822 256 aa10.02□□□□□ -0.81
CTNNA1-216ENST00000519489 RPS6KA4O75676 772 aa10.02□□□□□ -0.81
CTNNA1-216ENST00000519489 SAPCD2Q86UD0 394 aa10.02□□□□□ -0.81
CTNNA1-216ENST00000519489 ATG3Q9NT62 314 aa10.02□□□□□ -0.81
CTNNA1-216ENST00000519489 HACL1Q9UJ83 578 aa10.02□□□□□ -0.81
CTNNA1-216ENST00000519489 VCANP13611 3396 aa10.02□□□□□ -0.81
CTNNA1-216ENST00000519489 UNC80Q8N2C7 3258 aa10.01□□□□□ -0.81
CTNNA1-216ENST00000519489 MPNDQ8N594 471 aa10.01□□□□□ -0.81
CTNNA1-216ENST00000519489 CD163L1Q9NR16 1453 aa10.01□□□□□ -0.81
CTNNA1-216ENST00000519489 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
CTNNA1-216ENST00000519489 LTN1O94822 1766 aa10.01□□□□□ -0.81
CTNNA1-216ENST00000519489 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
CTNNA1-216ENST00000519489 C2CD5Q86YS7 1000 aa10□□□□□ -0.81
CTNNA1-216ENST00000519489 USP42Q9H9J4 1324 aaKnown RBP10□□□□□ -0.81
CTNNA1-216ENST00000519489 LTBP3Q9NS15 1303 aa10□□□□□ -0.81
CTNNA1-216ENST00000519489 SBNO2Q9Y2G9 1366 aa10□□□□□ -0.81
CTNNA1-216ENST00000519489 HOXC9P31274 260 aa9.99□□□□□ -0.81
CTNNA1-216ENST00000519489 CTU1Q7Z7A3 348 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-216ENST00000519489 PPARGC1BQ86YN6 1023 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-216ENST00000519489 RNF25Q96BH1 459 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-216ENST00000519489 COL25A1Q9BXS0 654 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-216ENST00000519489 KTN1Q86UP2 1357 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-216ENST00000519489 RGPD2P0DJD1 1756 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 RIOK3O14730 519 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 C3orf67Q6ZVT6 689 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 HTTP42858 3142 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 MAP3K19Q56UN5 1328 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 PCDH11XQ9BZA7 1347 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 PCDH11YQ9BZA8 1340 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 CNTNAP4Q9C0A0 1308 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 CENPJQ9HC77 1338 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 ITGB4P16144 1822 aa9.98□□□□□ -0.81
CTNNA1-216ENST00000519489 PNMA8AQ86V59 439 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-216ENST00000519489 TAOK3Q9H2K8 898 aa9.97□□□□□ -0.81
CTNNA1-216ENST00000519489 SCN4AP35499 1836 aa9.97□□□□□ -0.81
CTNNA1-216ENST00000519489 INSRP06213 1382 aa9.97□□□□□ -0.81
CTNNA1-216ENST00000519489 LAMA3Q16787 3333 aa9.96□□□□□ -0.81
CTNNA1-216ENST00000519489 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-216ENST00000519489 SNPHO15079 494 aa9.96□□□□□ -0.82
CTNNA1-216ENST00000519489 NFIXQ14938 502 aa9.96□□□□□ -0.82
CTNNA1-216ENST00000519489 RNF186Q9NXI6 227 aa9.96□□□□□ -0.82
CTNNA1-216ENST00000519489 CGNL1Q0VF96 1302 aa9.96□□□□□ -0.82
CTNNA1-216ENST00000519489 TRPA1O75762 1119 aa9.95□□□□□ -0.82
CTNNA1-216ENST00000519489 TATP17735 454 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-216ENST00000519489 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
CTNNA1-216ENST00000519489 FER1L6Q2WGJ9 1857 aa9.95□□□□□ -0.82
CTNNA1-216ENST00000519489 CEP290O15078 2479 aa9.94□□□□□ -0.82
CTNNA1-216ENST00000519489 MYH14Q7Z406 1995 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-216ENST00000519489 DLEC1Q9Y238 1755 aa9.94□□□□□ -0.82
CTNNA1-216ENST00000519489 FAM155AB1AL88 458 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-216ENST00000519489 ST18O60284 1047 aa9.94□□□□□ -0.82
CTNNA1-216ENST00000519489 SYNE4Q8N205 404 aa9.94□□□□□ -0.82
CTNNA1-216ENST00000519489 RAPGEF4Q8WZA2 1011 aa9.94□□□□□ -0.82
CTNNA1-216ENST00000519489 H0YIN7 160 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 CELF2O95319 508 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 EPS15P42566 896 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 DLK2Q6UY11 383 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 HHIPL1Q96JK4 782 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 TMOD3Q9NYL9 352 aa9.93□□□□□ -0.82
CTNNA1-216ENST00000519489 SERPINB2P05120 415 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 CRKLP46109 303 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 INTS5Q6P9B9 1019 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 OLFM4Q6UX06 510 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 C7orf43Q8WVR3 580 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 ZNF622Q969S3 477 aaKnown RBP eCLIP9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 ZNF277Q9NRM2 450 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 SAGE1Q9NXZ1 904 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 RAPGEFL1Q9UHV5 662 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 NRXN2Q9P2S2 1712 aa9.92□□□□□ -0.82
CTNNA1-216ENST00000519489 SMG6Q86US8 1419 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 FZD9O00144 591 aa9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 KIF23Q02241 960 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 NOGQ13253 232 aa9.91□□□□□ -0.82
CTNNA1-216ENST00000519489 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms