RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
CSMD3-209ENST00000519485 NOS2P35228 1153 aa7.14□□□□□ -1.27
CSMD3-209ENST00000519485 EML3Q32P44 896 aa7.14□□□□□ -1.27
CSMD3-209ENST00000519485 FOXD4L6Q3SYB3 417 aaPredicted RBP7.14□□□□□ -1.27
CSMD3-209ENST00000519485 POTEAQ6S8J7 498 aa7.14□□□□□ -1.27
CSMD3-209ENST00000519485 FOXD4L3Q6VB84 417 aaPredicted RBP7.14□□□□□ -1.27
CSMD3-209ENST00000519485 NOD1Q9Y239 953 aa7.14□□□□□ -1.27
CSMD3-209ENST00000519485 STARD13Q9Y3M8 1113 aa7.14□□□□□ -1.27
CSMD3-209ENST00000519485 M0R082 166 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 DYRK3O43781 588 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 NID1P14543 1247 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 ABL2P42684 1182 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 KCNQ4P56696 695 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 MICALL1Q8N3F8 863 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 ZNF417Q8TAU3 575 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 ZNF587Q96SQ5 575 aaPredicted RBP7.13□□□□□ -1.27
CSMD3-209ENST00000519485 ZNF358Q9NW07 568 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 PARP3Q9Y6F1 533 aa7.13□□□□□ -1.27
CSMD3-209ENST00000519485 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
CSMD3-209ENST00000519485 GTF2IP78347 998 aa7.12□□□□□ -1.27
CSMD3-209ENST00000519485 C1orf53Q5VUE5 145 aa7.12□□□□□ -1.27
CSMD3-209ENST00000519485 LRRC69Q6ZNQ3 347 aa7.12□□□□□ -1.27
CSMD3-209ENST00000519485 PIK3CDO00329 1044 aa7.11□□□□□ -1.27
CSMD3-209ENST00000519485 TRIM28Q13263 835 aaKnown RBP7.11□□□□□ -1.27
CSMD3-209ENST00000519485 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
CSMD3-209ENST00000519485 ARTNQ5T4W7 220 aa7.11□□□□□ -1.27
CSMD3-209ENST00000519485 C20orf204Q6ZNR8 217 aa7.11□□□□□ -1.27
CSMD3-209ENST00000519485 SLC30A3Q99726 388 aa7.11□□□□□ -1.27
CSMD3-209ENST00000519485 ALBP02768 609 aa7.1□□□□□ -1.27
CSMD3-209ENST00000519485 SPEM2Q0P670 501 aa7.1□□□□□ -1.27
CSMD3-209ENST00000519485 SFSWAPQ12872 951 aaKnown RBP7.1□□□□□ -1.27
CSMD3-209ENST00000519485 SLC9A9Q8IVB4 645 aa7.1□□□□□ -1.27
CSMD3-209ENST00000519485 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
CSMD3-209ENST00000519485 ALG2Q9H553 416 aa7.1□□□□□ -1.27
CSMD3-209ENST00000519485 SERTM1A2A2V5 107 aa7.09□□□□□ -1.27
CSMD3-209ENST00000519485 H2AFB1P0C5Y9 115 aa7.09□□□□□ -1.27
CSMD3-209ENST00000519485 H2AFB2P0C5Z0 115 aa7.09□□□□□ -1.27
CSMD3-209ENST00000519485 ADH7P40394 386 aa7.09□□□□□ -1.27
CSMD3-209ENST00000519485 NEUROD4Q9HD90 331 aa7.09□□□□□ -1.27
CSMD3-209ENST00000519485 ZFP64Q9NPA5 681 aa7.09□□□□□ -1.27
CSMD3-209ENST00000519485 C9orf172C9J069 976 aa7.08□□□□□ -1.28
CSMD3-209ENST00000519485 ADGRE1Q14246 886 aa7.08□□□□□ -1.28
CSMD3-209ENST00000519485 EFCC1Q9HA90 598 aa7.08□□□□□ -1.28
CSMD3-209ENST00000519485 ANKIB1Q9P2G1 1089 aa7.08□□□□□ -1.28
CSMD3-209ENST00000519485 SKIP12755 728 aa7.07□□□□□ -1.28
CSMD3-209ENST00000519485 NCOA4Q13772 614 aa7.07□□□□□ -1.28
CSMD3-209ENST00000519485 MCM6Q14566 821 aa7.07□□□□□ -1.28
CSMD3-209ENST00000519485 PRSS36Q5K4E3 855 aa7.07□□□□□ -1.28
CSMD3-209ENST00000519485 RHPN1Q8TCX5 695 aa7.07□□□□□ -1.28
CSMD3-209ENST00000519485 ZNF232Q9UNY5 417 aa7.07□□□□□ -1.28
CSMD3-209ENST00000519485 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 M0R2N6 131 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 ELNP15502 786 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 PSMA6P60900 246 aaKnown RBP7.06□□□□□ -1.28
CSMD3-209ENST00000519485 TPRNQ4KMQ1 711 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 C8orf86Q6ZUL3 223 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 ILDR2Q71H61 639 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 TNS4Q8IZW8 715 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 BRD7Q9NPI1 651 aa7.06□□□□□ -1.28
CSMD3-209ENST00000519485 USP17L5A8MUK1 530 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 LILRB5O75023 590 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 NRG1Q02297 640 aaPredicted RBP7.05□□□□□ -1.28
CSMD3-209ENST00000519485 PSME1Q06323 249 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 TYRO3Q06418 890 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 GRIK4Q16099 956 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 SH3PXD2AQ5TCZ1 1133 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 KRTAP1-3Q8IUG1 177 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 LENG1Q96BZ8 264 aaPredicted RBP7.05□□□□□ -1.28
CSMD3-209ENST00000519485 KCNH4Q9UQ05 1017 aa7.05□□□□□ -1.28
CSMD3-209ENST00000519485 SELPP16109 830 aa7.04□□□□□ -1.28
CSMD3-209ENST00000519485 MBTPS1Q14703 1052 aa7.04□□□□□ -1.28
CSMD3-209ENST00000519485 KRTAP4-12Q9BQ66 201 aa7.04□□□□□ -1.28
CSMD3-209ENST00000519485 COG6Q9Y2V7 657 aa7.04□□□□□ -1.28
CSMD3-209ENST00000519485 A0A0A0MRY4 1105 aa7.03□□□□□ -1.28
CSMD3-209ENST00000519485 ZBTB7BO15156 539 aaPredicted RBP7.03□□□□□ -1.28
CSMD3-209ENST00000519485 LRP8Q14114 963 aa7.03□□□□□ -1.28
CSMD3-209ENST00000519485 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
CSMD3-209ENST00000519485 STAG2Q8N3U4 1231 aa7.03□□□□□ -1.28
CSMD3-209ENST00000519485 CEP63Q96MT8 703 aa7.03□□□□□ -1.28
CSMD3-209ENST00000519485 CHMP3Q9Y3E7 222 aa7.03□□□□□ -1.28
CSMD3-209ENST00000519485 ATP1A2P50993 1020 aa7.02□□□□□ -1.29
CSMD3-209ENST00000519485 TBCELQ5QJ74 424 aa7.02□□□□□ -1.29
CSMD3-209ENST00000519485 TRAPPC3LQ5T215 181 aa7.02□□□□□ -1.29
CSMD3-209ENST00000519485 SUSD3Q96L08 255 aa7.02□□□□□ -1.29
CSMD3-209ENST00000519485 PHACTR1Q9C0D0 580 aa7.02□□□□□ -1.29
CSMD3-209ENST00000519485 RAC1P63000 192 aa7.01□□□□□ -1.29
CSMD3-209ENST00000519485 HIF1AQ16665 826 aa7.01□□□□□ -1.29
CSMD3-209ENST00000519485 RAB44Q7Z6P3 723 aaPredicted RBP7.01□□□□□ -1.29
CSMD3-209ENST00000519485 TPCN2Q8NHX9 752 aa7.01□□□□□ -1.29
CSMD3-209ENST00000519485 HSH2DQ96JZ2 352 aa7.01□□□□□ -1.29
CSMD3-209ENST00000519485 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
CSMD3-209ENST00000519485 TSPAN10Q9H1Z9 355 aaPredicted RBP7.01□□□□□ -1.29
CSMD3-209ENST00000519485 SFI1A8K8P3 1242 aa7□□□□□ -1.29
CSMD3-209ENST00000519485 CCDC102BQ68D86 513 aa7□□□□□ -1.29
CSMD3-209ENST00000519485 NBPF11Q86T75 865 aa7□□□□□ -1.29
CSMD3-209ENST00000519485 WWC1Q8IX03 1113 aa7□□□□□ -1.29
CSMD3-209ENST00000519485 LARGE2Q8N3Y3 721 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms