RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-215	ENST00000519309	ZNF541	Q9H0D2	1346 aa		11.48	□□□□□ -0.57
CTNNA1-215	ENST00000519309	IL6ST	P40189	918 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNNA1-215	ENST00000519309	RGS19	P49795	217 aa		11.47	□□□□□ -0.57
CTNNA1-215	ENST00000519309	MAP2K1	Q02750	393 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNNA1-215	ENST00000519309	CCDC93	Q567U6	631 aa		11.47	□□□□□ -0.57
CTNNA1-215	ENST00000519309	MASTL	Q96GX5	879 aa		11.47	□□□□□ -0.57
CTNNA1-215	ENST00000519309	LAMB4	A4D0S4	1761 aa		11.46	□□□□□ -0.57
CTNNA1-215	ENST00000519309	COL3A1	P02461	1466 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNNA1-215	ENST00000519309	CAMTA2	O94983	1202 aa		11.46	□□□□□ -0.57
CTNNA1-215	ENST00000519309	ST5	P78524	1137 aa		11.46	□□□□□ -0.57
CTNNA1-215	ENST00000519309	MORC1	Q86VD1	984 aa		11.46	□□□□□ -0.57
CTNNA1-215	ENST00000519309	HACL1	Q9UJ83	578 aa		11.46	□□□□□ -0.57
CTNNA1-215	ENST00000519309	COL4A5	P29400	1685 aa		11.46	□□□□□ -0.58
CTNNA1-215	ENST00000519309	WDR33	Q9C0J8	1336 aa	Known RBP	11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	EPHX2	P34913	555 aa		11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	PNMA8A	Q86V59	439 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	TTC5	Q8N0Z6	440 aa		11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	ZNF496	Q96IT1	587 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	PANK3	Q9H999	370 aa		11.45	□□□□□ -0.58
CTNNA1-215	ENST00000519309	KLRG2	A4D1S0	409 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	FZD9	O00144	591 aa		11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	MLLT1	Q03111	559 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	MTHFSD	Q2M296	383 aa	Known RBP	11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	DEFB115	Q30KQ5	88 aa		11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	EAPP	Q56P03	285 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	CCDC24	Q8N4L8	307 aa		11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	TIMELESS	Q9UNS1	1208 aa		11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	TNRC18	O15417	2968 aa	Predicted RBP	11.44	□□□□□ -0.58
CTNNA1-215	ENST00000519309	CEMIP	Q8WUJ3	1361 aa		11.43	□□□□□ -0.58
CTNNA1-215	ENST00000519309	RNF123	Q5XPI4	1314 aa		11.43	□□□□□ -0.58
CTNNA1-215	ENST00000519309	NPR1	P16066	1061 aa		11.43	□□□□□ -0.58
CTNNA1-215	ENST00000519309	ZNF790	Q6PG37	636 aa		11.43	□□□□□ -0.58
CTNNA1-215	ENST00000519309	SETDB2	Q96T68	719 aa		11.43	□□□□□ -0.58
CTNNA1-215	ENST00000519309	TBC1D2B	Q9UPU7	963 aa		11.43	□□□□□ -0.58
CTNNA1-215	ENST00000519309	RIC1	Q4ADV7	1423 aa		11.43	□□□□□ -0.58
CTNNA1-215	ENST00000519309	RGL2	O15211	777 aa		11.42	□□□□□ -0.58
CTNNA1-215	ENST00000519309	MAP1S	Q66K74	1059 aa	Predicted RBP	11.42	□□□□□ -0.58
CTNNA1-215	ENST00000519309	CNTROB	Q8N137	903 aa		11.42	□□□□□ -0.58
CTNNA1-215	ENST00000519309	GPC2	Q8N158	579 aa		11.42	□□□□□ -0.58
CTNNA1-215	ENST00000519309	HMOX1	P09601	288 aa		11.41	□□□□□ -0.58
CTNNA1-215	ENST00000519309	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNNA1-215	ENST00000519309	CLEC4G	Q6UXB4	293 aa		11.41	□□□□□ -0.58
CTNNA1-215	ENST00000519309	RTKN2	Q8IZC4	609 aa		11.41	□□□□□ -0.58
CTNNA1-215	ENST00000519309	POLR3GL	Q9BT43	218 aa		11.41	□□□□□ -0.58
CTNNA1-215	ENST00000519309	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
CTNNA1-215	ENST00000519309	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNNA1-215	ENST00000519309	NPHP1	O15259	732 aa		11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	IARS	P41252	1262 aa	Known RBP	11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	ECE1	P42892	770 aa		11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	DZIP3	Q86Y13	1208 aa	Known RBP	11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	CAPNS2	Q96L46	248 aa		11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	FMNL2	Q96PY5	1086 aa		11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	PSMD1	Q99460	953 aa		11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	ABT1	Q9ULW3	272 aa	Known RBP	11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	CLEC11A	Q9Y240	323 aa		11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNNA1-215	ENST00000519309	NUP98	P52948	1817 aa		11.39	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CASP8AP2	Q9UKL3	1982 aa		11.39	□□□□□ -0.59
CTNNA1-215	ENST00000519309	A1BG	P04217	495 aa		11.39	□□□□□ -0.59
CTNNA1-215	ENST00000519309	TEF	Q10587	303 aa		11.39	□□□□□ -0.59
CTNNA1-215	ENST00000519309	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.39	□□□□□ -0.59
CTNNA1-215	ENST00000519309	ZNF652	Q9Y2D9	606 aa		11.39	□□□□□ -0.59
CTNNA1-215	ENST00000519309	OLFM4	Q6UX06	510 aa		11.38	□□□□□ -0.59
CTNNA1-215	ENST00000519309	IL17RE	Q8NFR9	667 aa		11.38	□□□□□ -0.59
CTNNA1-215	ENST00000519309	GAS2L2	Q8NHY3	880 aa		11.38	□□□□□ -0.59
CTNNA1-215	ENST00000519309	BEGAIN	Q9BUH8	593 aa		11.38	□□□□□ -0.59
CTNNA1-215	ENST00000519309	KNSTRN	Q9Y448	316 aa		11.38	□□□□□ -0.59
CTNNA1-215	ENST00000519309	TLL2	Q9Y6L7	1015 aa		11.38	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CCDC85C	A6NKD9	419 aa		11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	GNAT3	A8MTJ3	354 aa		11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CA12	O43570	354 aa		11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	DIAPH1	O60610	1272 aa	Known RBP	11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	MAP2K2	P36507	400 aa		11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	SCNN1D	P51172	638 aa		11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CRY2	Q49AN0	593 aa		11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	NPM2	Q86SE8	214 aa	Known RBP	11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	ABCC12	Q96J65	1359 aa		11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.37	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CLSPN	Q9HAW4	1339 aa		11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	KDM3B	Q7LBC6	1761 aa		11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CYP4F22	Q6NT55	531 aa		11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	SYNE4	Q8N205	404 aa		11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	JDP2	Q8WYK2	163 aa		11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	HHIPL1	Q96JK4	782 aa		11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	GPR101	Q96P66	508 aa	Predicted RBP	11.36	□□□□□ -0.59
CTNNA1-215	ENST00000519309	HSPA5	P11021	654 aa	Known RBP	11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	LMOD1	P29536	600 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	ALDH1B1	P30837	517 aa		11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	BRPF1	P55201	1214 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CST9	Q5W186	159 aa		11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	CC2D2B	Q6DHV5	1058 aa		11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	TPTE2	Q6XPS3	522 aa		11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	USP50	Q70EL3	339 aa	Predicted RBP	11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	MCOLN1	Q9GZU1	580 aa		11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	KIF7	Q2M1P5	1343 aa		11.35	□□□□□ -0.59
CTNNA1-215	ENST00000519309	EIF6	P56537	245 aa	Known RBP	11.34	□□□□□ -0.59
CTNNA1-215	ENST00000519309	FMR1	Q06787	632 aa	Known RBP eCLIP	11.34	□□□□□ -0.59	3e-6	■■■■□ 21.6

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