RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ARXQ96QS3 562 aa18.16■□□□□ 0.5
CLN8-204ENST00000519254 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
CLN8-204ENST00000519254 EP400Q96L91 3159 aa18.16■□□□□ 0.5
CLN8-204ENST00000519254 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
CLN8-204ENST00000519254 COL5A3P25940 1745 aaPredicted RBP18.15■□□□□ 0.5
CLN8-204ENST00000519254 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
CLN8-204ENST00000519254 C8orf34Q49A92 452 aa18.14■□□□□ 0.5
CLN8-204ENST00000519254 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.5
CLN8-204ENST00000519254 ANKRD13DQ6ZTN6 518 aa18.14■□□□□ 0.5
CLN8-204ENST00000519254 PXDNLA1KZ92 1463 aa18.14■□□□□ 0.49
CLN8-204ENST00000519254 FAM161AQ3B820 660 aa18.14■□□□□ 0.49
CLN8-204ENST00000519254 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
CLN8-204ENST00000519254 MEIS3Q99687 375 aa18.14■□□□□ 0.49
CLN8-204ENST00000519254 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
CLN8-204ENST00000519254 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
CLN8-204ENST00000519254 ZBTB3Q9H5J0 574 aa18.13■□□□□ 0.49
CLN8-204ENST00000519254 APBA3O96018 575 aa18.12■□□□□ 0.49
CLN8-204ENST00000519254 SRCIN1Q9C0H9 1055 aa18.12■□□□□ 0.49
CLN8-204ENST00000519254 NUCB1Q02818 461 aa18.12■□□□□ 0.49
CLN8-204ENST00000519254 KIF6Q6ZMV9 814 aa18.12■□□□□ 0.49
CLN8-204ENST00000519254 ARFGEF2Q9Y6D5 1785 aa18.12■□□□□ 0.49
CLN8-204ENST00000519254 IL6STP40189 918 aaPredicted RBP18.11■□□□□ 0.49
CLN8-204ENST00000519254 BEND3Q5T5X7 828 aa18.11■□□□□ 0.49
CLN8-204ENST00000519254 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
CLN8-204ENST00000519254 PLBD2Q8NHP8 589 aa18.11■□□□□ 0.49
CLN8-204ENST00000519254 GCC1Q96CN9 775 aa18.11■□□□□ 0.49
CLN8-204ENST00000519254 MYD88Q99836 296 aa18.11■□□□□ 0.49
CLN8-204ENST00000519254 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
CLN8-204ENST00000519254 RREB1Q92766 1687 aa18.1■□□□□ 0.49
CLN8-204ENST00000519254 LRRC4BQ9NT99 713 aa18.1■□□□□ 0.49
CLN8-204ENST00000519254 TNS1Q9HBL0 1735 aaKnown RBP18.1■□□□□ 0.49
CLN8-204ENST00000519254 TAF1LQ8IZX4 1826 aa18.1■□□□□ 0.49
CLN8-204ENST00000519254 NEXNQ0ZGT2 675 aa18.09■□□□□ 0.49
CLN8-204ENST00000519254 CWF19L2Q2TBE0 894 aaKnown RBP18.09■□□□□ 0.49
CLN8-204ENST00000519254 RPAP2Q8IXW5 612 aaPredicted RBP18.09■□□□□ 0.49
CLN8-204ENST00000519254 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
CLN8-204ENST00000519254 NUP188Q5SRE5 1749 aa18.09■□□□□ 0.49
CLN8-204ENST00000519254 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
CLN8-204ENST00000519254 CEP85Q6P2H3 762 aa18.09■□□□□ 0.49
CLN8-204ENST00000519254 TBC1D2BQ9UPU7 963 aa18.09■□□□□ 0.49
CLN8-204ENST00000519254 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.48
CLN8-204ENST00000519254 DZIP3Q86Y13 1208 aaKnown RBP18.08■□□□□ 0.48
CLN8-204ENST00000519254 ATP5J2-PTCD1G3V325 749 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 GNPATO15228 680 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 C4BP0C0L5 1744 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 TXNRD1Q16881 649 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 SLC27A3Q5K4L6 730 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 CHD1LQ86WJ1 897 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 LINS1Q8NG48 757 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 COL15A1P39059 1388 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 MAP3K15Q6ZN16 1313 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 DCTPP1Q9H773 170 aa18.07■□□□□ 0.48
CLN8-204ENST00000519254 IGKV5-2P06315 115 aa18.06■□□□□ 0.48
CLN8-204ENST00000519254 AK7Q96M32 723 aa18.06■□□□□ 0.48
CLN8-204ENST00000519254 LNPKQ9C0E8 428 aa18.06■□□□□ 0.48
CLN8-204ENST00000519254 PLSCR1O15162 318 aa18.05■□□□□ 0.48
CLN8-204ENST00000519254 ALDH1L1O75891 902 aa18.05■□□□□ 0.48
CLN8-204ENST00000519254 RC3H1Q5TC82 1133 aaKnown RBP18.05■□□□□ 0.48
CLN8-204ENST00000519254 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
CLN8-204ENST00000519254 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
CLN8-204ENST00000519254 NEURL1BA8MQ27 555 aa18.04■□□□□ 0.48
CLN8-204ENST00000519254 GNAI3P08754 354 aa18.04■□□□□ 0.48
CLN8-204ENST00000519254 HLFQ16534 295 aa18.04■□□□□ 0.48
CLN8-204ENST00000519254 PROM2Q8N271 834 aa18.04■□□□□ 0.48
CLN8-204ENST00000519254 USP44Q9H0E7 712 aa18.04■□□□□ 0.48
CLN8-204ENST00000519254 C9orf78Q9NZ63 289 aaPredicted RBP18.04■□□□□ 0.48
CLN8-204ENST00000519254 GNAI2P04899 355 aa18.04■□□□□ 0.48
CLN8-204ENST00000519254 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
CLN8-204ENST00000519254 RPS6KA4O75676 772 aa18.03■□□□□ 0.48
CLN8-204ENST00000519254 PHF14O94880 888 aa18.03■□□□□ 0.48
CLN8-204ENST00000519254 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
CLN8-204ENST00000519254 MSH5O43196 834 aa18.02■□□□□ 0.48
CLN8-204ENST00000519254 NBPF7P0C2Y1 421 aaPredicted RBP18.02■□□□□ 0.48
CLN8-204ENST00000519254 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
CLN8-204ENST00000519254 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
CLN8-204ENST00000519254 A0A087WZG4 1122 aa18.02■□□□□ 0.47
CLN8-204ENST00000519254 SF3B2Q13435 895 aaKnown RBP18.02■□□□□ 0.47
CLN8-204ENST00000519254 TCIRG1Q13488 830 aa18.02■□□□□ 0.47
CLN8-204ENST00000519254 GCKRQ14397 625 aa18.02■□□□□ 0.47
CLN8-204ENST00000519254 AMIGO3Q86WK7 504 aa18.02■□□□□ 0.47
CLN8-204ENST00000519254 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
CLN8-204ENST00000519254 GPTP24298 496 aa18.01■□□□□ 0.47
CLN8-204ENST00000519254 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
CLN8-204ENST00000519254 GRM8O00222 908 aa18■□□□□ 0.47
CLN8-204ENST00000519254 CAMTA2O94983 1202 aa18■□□□□ 0.47
CLN8-204ENST00000519254 EN1Q05925 392 aaPredicted RBP18■□□□□ 0.47
CLN8-204ENST00000519254 JARID2Q92833 1246 aaPredicted RBP18■□□□□ 0.47
CLN8-204ENST00000519254 CWC25Q9NXE8 425 aaPredicted RBP18■□□□□ 0.47
CLN8-204ENST00000519254 NUP98P52948 1817 aa18■□□□□ 0.47
CLN8-204ENST00000519254 HMMRO75330 724 aa17.99■□□□□ 0.47
CLN8-204ENST00000519254 RGPD3A6NKT7 1758 aaPredicted RBP17.99■□□□□ 0.47
CLN8-204ENST00000519254 RGPD4Q7Z3J3 1758 aa17.99■□□□□ 0.47
CLN8-204ENST00000519254 ANKRD36CQ5JPF3 1778 aa17.99■□□□□ 0.47
CLN8-204ENST00000519254 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
CLN8-204ENST00000519254 ATP8B2P98198 1209 aa17.99■□□□□ 0.47
CLN8-204ENST00000519254 EZH2Q15910 746 aaKnown RBP17.99■□□□□ 0.47
CLN8-204ENST00000519254 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
CLN8-204ENST00000519254 RTL5Q5HYW3 569 aaPredicted RBP17.99■□□□□ 0.47
CLN8-204ENST00000519254 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms