RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 DEFB132Q7Z7B7 95 aa12.27□□□□□ -0.44
SH2D4A-204ENST00000519207 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.44
SH2D4A-204ENST00000519207 USP44Q9H0E7 712 aa12.27□□□□□ -0.44
SH2D4A-204ENST00000519207 R3HCC1Q9Y3T6 440 aaKnown RBP12.27□□□□□ -0.44
SH2D4A-204ENST00000519207 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.44
SH2D4A-204ENST00000519207 ALS2Q96Q42 1657 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 GOLGA6L22H0YM25 854 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 CSPP1Q1MSJ5 1256 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 KLHL40Q2TBA0 621 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 KRT27Q7Z3Y8 459 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 LMO7Q8WWI1 1683 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
SH2D4A-204ENST00000519207 EIF4A1P60842 406 aaKnown RBP12.26□□□□□ -0.45
SH2D4A-204ENST00000519207 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
SH2D4A-204ENST00000519207 SSH3Q8TE77 659 aa12.26□□□□□ -0.45
SH2D4A-204ENST00000519207 NECTIN2Q92692 538 aa12.26□□□□□ -0.45
SH2D4A-204ENST00000519207 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
SH2D4A-204ENST00000519207 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
SH2D4A-204ENST00000519207 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 SASS6Q6UVJ0 657 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 A0A0G2JS52 829 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 SSFA2P28290 1259 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 AKAP4Q5JQC9 854 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 ESYT1Q9BSJ8 1104 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 ZHX1Q9UKY1 873 aaPredicted RBP12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 ZKSCAN5Q9Y2L8 839 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 OVOS2A0A0G2JMS6 1433 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
SH2D4A-204ENST00000519207 CYP2E1P05181 493 aaPredicted RBP12.24□□□□□ -0.45
SH2D4A-204ENST00000519207 POLA2Q14181 598 aa12.24□□□□□ -0.45
SH2D4A-204ENST00000519207 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
SH2D4A-204ENST00000519207 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
SH2D4A-204ENST00000519207 IL17RAQ96F46 866 aa12.24□□□□□ -0.45
SH2D4A-204ENST00000519207 PRDM11Q9NQV5 511 aa12.24□□□□□ -0.45
SH2D4A-204ENST00000519207 BAG4O95429 457 aaKnown RBP12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 MCCP23508 829 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 MCM2P49736 904 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 ANAPC15P60006 121 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 PHAXQ9H814 394 aaKnown RBP12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 AK9Q5TCS8 1911 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 SPATA31A5Q5VU36 1347 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 SPATA31A7Q8IWB4 1347 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 CHMLP26374 656 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 GTF2F1P35269 517 aaKnown RBP eCLIP12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 CHRNA2Q15822 529 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 LGR6Q9HBX8 967 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 SLIT3O75094 1523 aa12.23□□□□□ -0.45
SH2D4A-204ENST00000519207 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
SH2D4A-204ENST00000519207 LETM1O95202 739 aaPredicted RBP12.22□□□□□ -0.45
SH2D4A-204ENST00000519207 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
SH2D4A-204ENST00000519207 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
SH2D4A-204ENST00000519207 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
SH2D4A-204ENST00000519207 TEFQ10587 303 aa12.21□□□□□ -0.45
SH2D4A-204ENST00000519207 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
SH2D4A-204ENST00000519207 ZNF530Q6P9A1 599 aaPredicted RBP12.21□□□□□ -0.45
SH2D4A-204ENST00000519207 ARHGEF25Q86VW2 580 aa12.21□□□□□ -0.45
SH2D4A-204ENST00000519207 DNAAF4Q8WXU2 420 aa12.21□□□□□ -0.45
SH2D4A-204ENST00000519207 GCP02774 474 aa12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 EIF2S2P20042 333 aaKnown RBP12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 HSP90AB4PQ58FF6 505 aa12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 BEND3Q5T5X7 828 aa12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 PPP1R42Q7Z4L9 355 aa12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.46
SH2D4A-204ENST00000519207 CAMTA1Q9Y6Y1 1673 aa12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 BTBD11A6QL63 1104 aa12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 TSHZ3Q63HK5 1081 aa12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 MYRIPQ8NFW9 859 aa12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
SH2D4A-204ENST00000519207 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 C1orf141Q5JVX7 400 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 STRN4Q9NRL3 753 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 TMEM51Q9NW97 253 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 DBF4Q9UBU7 674 aaPredicted RBP12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 PI4KAP2A4QPH2 592 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 NEK4P51957 841 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 PI4KAP1Q8N8J0 262 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 RHPN1Q8TCX5 695 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 PRDM10Q9NQV6 1147 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 SPATA31A1Q5TZJ5 1347 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
SH2D4A-204ENST00000519207 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 MTX1Q13505 466 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
SH2D4A-204ENST00000519207 DDX49Q9Y6V7 483 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms