RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 CAMTA2O94983 1202 aa18.31■□□□□ 0.52
VDAC3-204ENST00000519072 VEGFAP15692 232 aaPredicted RBP18.31■□□□□ 0.52
VDAC3-204ENST00000519072 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.52
VDAC3-204ENST00000519072 CCDC24Q8N4L8 307 aa18.3■□□□□ 0.52
VDAC3-204ENST00000519072 JMYQ8N9B5 988 aa18.3■□□□□ 0.52
VDAC3-204ENST00000519072 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
VDAC3-204ENST00000519072 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
VDAC3-204ENST00000519072 SLX4Q8IY92 1834 aa18.3■□□□□ 0.52
VDAC3-204ENST00000519072 CNBD1Q8NA66 436 aa18.29■□□□□ 0.52
VDAC3-204ENST00000519072 C21orf2O43822 256 aa18.28■□□□□ 0.52
VDAC3-204ENST00000519072 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
VDAC3-204ENST00000519072 USP16Q9Y5T5 823 aa18.28■□□□□ 0.52
VDAC3-204ENST00000519072 LTBP3Q9NS15 1303 aa18.27■□□□□ 0.52
VDAC3-204ENST00000519072 ST5P78524 1137 aa18.27■□□□□ 0.52
VDAC3-204ENST00000519072 RTF1Q92541 710 aaKnown RBP18.27■□□□□ 0.52
VDAC3-204ENST00000519072 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.52
VDAC3-204ENST00000519072 POTECB2RU33 542 aa18.26■□□□□ 0.51
VDAC3-204ENST00000519072 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
VDAC3-204ENST00000519072 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
VDAC3-204ENST00000519072 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
VDAC3-204ENST00000519072 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
VDAC3-204ENST00000519072 STYK1Q6J9G0 422 aa18.26■□□□□ 0.51
VDAC3-204ENST00000519072 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
VDAC3-204ENST00000519072 CLEC4GQ6UXB4 293 aa18.26■□□□□ 0.51
VDAC3-204ENST00000519072 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
VDAC3-204ENST00000519072 PRAMEF22A3QJZ6 481 aa18.25■□□□□ 0.51
VDAC3-204ENST00000519072 NPHP1O15259 732 aa18.25■□□□□ 0.51
VDAC3-204ENST00000519072 SRGNP10124 158 aa18.25■□□□□ 0.51
VDAC3-204ENST00000519072 ERFEQ4G0M1 354 aa18.25■□□□□ 0.51
VDAC3-204ENST00000519072 MCM10Q7L590 875 aa18.25■□□□□ 0.51
VDAC3-204ENST00000519072 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
VDAC3-204ENST00000519072 PIP4K2AP48426 406 aaPredicted RBP18.24■□□□□ 0.51
VDAC3-204ENST00000519072 PRPF40BQ6NWY9 871 aaKnown RBP18.24■□□□□ 0.51
VDAC3-204ENST00000519072 MASTLQ96GX5 879 aa18.24■□□□□ 0.51
VDAC3-204ENST00000519072 TAOK3Q9H2K8 898 aa18.24■□□□□ 0.51
VDAC3-204ENST00000519072 ZNF652Q9Y2D9 606 aa18.24■□□□□ 0.51
VDAC3-204ENST00000519072 LAMB4A4D0S4 1761 aa18.24■□□□□ 0.51
VDAC3-204ENST00000519072 RGL2O15211 777 aa18.23■□□□□ 0.51
VDAC3-204ENST00000519072 SOGA3Q5TF21 947 aa18.23■□□□□ 0.51
VDAC3-204ENST00000519072 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
VDAC3-204ENST00000519072 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
VDAC3-204ENST00000519072 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
VDAC3-204ENST00000519072 DCTN1Q14203 1278 aa18.21■□□□□ 0.51
VDAC3-204ENST00000519072 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
VDAC3-204ENST00000519072 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
VDAC3-204ENST00000519072 KLRG2A4D1S0 409 aaPredicted RBP18.2■□□□□ 0.5
VDAC3-204ENST00000519072 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
VDAC3-204ENST00000519072 NPR1P16066 1061 aa18.19■□□□□ 0.5
VDAC3-204ENST00000519072 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
VDAC3-204ENST00000519072 TPTE2Q6XPS3 522 aa18.19■□□□□ 0.5
VDAC3-204ENST00000519072 C7orf43Q8WVR3 580 aa18.19■□□□□ 0.5
VDAC3-204ENST00000519072 SCN4AP35499 1836 aa18.19■□□□□ 0.5
VDAC3-204ENST00000519072 NIP7Q9Y221 180 aaKnown RBP eCLIP18.18■□□□□ 0.5
VDAC3-204ENST00000519072 NUP98P52948 1817 aa18.18■□□□□ 0.5
VDAC3-204ENST00000519072 CAPN15O75808 1086 aa18.17■□□□□ 0.5
VDAC3-204ENST00000519072 DDNO94850 711 aaPredicted RBP18.17■□□□□ 0.5
VDAC3-204ENST00000519072 CCDC93Q567U6 631 aa18.17■□□□□ 0.5
VDAC3-204ENST00000519072 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
VDAC3-204ENST00000519072 CHADLQ6NUI6 762 aa18.16■□□□□ 0.5
VDAC3-204ENST00000519072 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
VDAC3-204ENST00000519072 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
VDAC3-204ENST00000519072 FKBP4Q02790 459 aaKnown RBP eCLIP18.14■□□□□ 0.49
VDAC3-204ENST00000519072 HLFQ16534 295 aa18.14■□□□□ 0.49
VDAC3-204ENST00000519072 PNISRQ8TF01 805 aaKnown RBP18.14■□□□□ 0.49
VDAC3-204ENST00000519072 L3MBTL3Q96JM7 780 aaPredicted RBP18.14■□□□□ 0.49
VDAC3-204ENST00000519072 IQCA1LA6NCM1 817 aa18.13■□□□□ 0.49
VDAC3-204ENST00000519072 FAM177BA6PVY3 158 aa18.13■□□□□ 0.49
VDAC3-204ENST00000519072 NEFMP07197 916 aa18.13■□□□□ 0.49
VDAC3-204ENST00000519072 POTEIP0CG38 1075 aa18.13■□□□□ 0.49
VDAC3-204ENST00000519072 POTEJP0CG39 1038 aa18.13■□□□□ 0.49
VDAC3-204ENST00000519072 ALDH1B1P30837 517 aa18.12■□□□□ 0.49
VDAC3-204ENST00000519072 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
VDAC3-204ENST00000519072 CREBZFQ9NS37 354 aa18.12■□□□□ 0.49
VDAC3-204ENST00000519072 ERVV-1B6SEH8 477 aa18.11■□□□□ 0.49
VDAC3-204ENST00000519072 HSPA1AP0DMV8 641 aaKnown RBP18.11■□□□□ 0.49
VDAC3-204ENST00000519072 HSPA1BP0DMV9 641 aaKnown RBP18.11■□□□□ 0.49
VDAC3-204ENST00000519072 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
VDAC3-204ENST00000519072 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
VDAC3-204ENST00000519072 PLEKHF1Q96S99 279 aa18.11■□□□□ 0.49
VDAC3-204ENST00000519072 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
VDAC3-204ENST00000519072 CRY2Q49AN0 593 aa18.1■□□□□ 0.49
VDAC3-204ENST00000519072 LDHDQ86WU2 507 aa18.1■□□□□ 0.49
VDAC3-204ENST00000519072 NYXQ9GZU5 481 aa18.1■□□□□ 0.49
VDAC3-204ENST00000519072 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
VDAC3-204ENST00000519072 ZNF277Q9NRM2 450 aaPredicted RBP18.1■□□□□ 0.49
VDAC3-204ENST00000519072 RIC1Q4ADV7 1423 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 ABCC12Q96J65 1359 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 MAP3K15Q6ZN16 1313 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 PASKQ96RG2 1323 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 ZNF541Q9H0D2 1346 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 ADAMTSL1Q8N6G6 1762 aa18.09■□□□□ 0.49
VDAC3-204ENST00000519072 IBTKQ9P2D0 1353 aaPredicted RBP18.08■□□□□ 0.49
VDAC3-204ENST00000519072 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
VDAC3-204ENST00000519072 KIF6Q6ZMV9 814 aa18.08■□□□□ 0.48
VDAC3-204ENST00000519072 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
VDAC3-204ENST00000519072 TNS4Q8IZW8 715 aa18.08■□□□□ 0.48
VDAC3-204ENST00000519072 NGEFQ8N5V2 710 aa18.08■□□□□ 0.48
VDAC3-204ENST00000519072 RRP7AQ9Y3A4 280 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms