RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 FOXO3O43524 673 aa7.37□□□□□ -1.23
SKP1-205ENST00000519054 MX2P20592 715 aa7.37□□□□□ -1.23
SKP1-205ENST00000519054 FKBP5Q13451 457 aaPredicted RBP7.37□□□□□ -1.23
SKP1-205ENST00000519054 OCLNQ16625 522 aa7.37□□□□□ -1.23
SKP1-205ENST00000519054 VTI1AQ96AJ9 217 aa7.37□□□□□ -1.23
SKP1-205ENST00000519054 HSH2DQ96JZ2 352 aa7.37□□□□□ -1.23
SKP1-205ENST00000519054 CFHR5Q9BXR6 569 aa7.37□□□□□ -1.23
SKP1-205ENST00000519054 MBIPQ9NS73 344 aa7.37□□□□□ -1.23
SKP1-205ENST00000519054 ATXN7L1Q9ULK2 861 aaPredicted RBP7.37□□□□□ -1.23
SKP1-205ENST00000519054 KHNYNO15037 678 aaKnown RBP7.36□□□□□ -1.23
SKP1-205ENST00000519054 NDFIP2Q9NV92 336 aa7.36□□□□□ -1.23
SKP1-205ENST00000519054 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
SKP1-205ENST00000519054 ADAMTS2O95450 1211 aa7.35□□□□□ -1.23
SKP1-205ENST00000519054 FGFR3P22607 806 aa7.35□□□□□ -1.23
SKP1-205ENST00000519054 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
SKP1-205ENST00000519054 SRSF11Q05519 484 aaKnown RBP7.35□□□□□ -1.23
SKP1-205ENST00000519054 ZSCAN1Q8NBB4 408 aa7.35□□□□□ -1.23
SKP1-205ENST00000519054 ZNF280CQ8ND82 737 aa7.35□□□□□ -1.23
SKP1-205ENST00000519054 CLP1Q92989 425 aaKnown RBP7.35□□□□□ -1.23
SKP1-205ENST00000519054 SUSD3Q96L08 255 aa7.35□□□□□ -1.23
SKP1-205ENST00000519054 MKNK1Q9BUB5 465 aa7.35□□□□□ -1.23
SKP1-205ENST00000519054 SLAIN2Q9P270 581 aa7.35□□□□□ -1.23
SKP1-205ENST00000519054 IGF1RP08069 1367 aa7.34□□□□□ -1.23
SKP1-205ENST00000519054 CARNS1A5YM72 827 aa7.34□□□□□ -1.23
SKP1-205ENST00000519054 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
SKP1-205ENST00000519054 TNP2Q05952 138 aa7.34□□□□□ -1.23
SKP1-205ENST00000519054 RTN1Q16799 776 aa7.34□□□□□ -1.23
SKP1-205ENST00000519054 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
SKP1-205ENST00000519054 CXXC1Q9P0U4 656 aaPredicted RBP7.34□□□□□ -1.23
SKP1-205ENST00000519054 TMEM88BA6NKF7 163 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 FAM157BP0CG42 384 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 CD33P20138 364 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 ATP2B4P23634 1241 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 CTBSQ01459 385 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 SAMD5Q5TGI4 173 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 KLK14Q9P0G3 267 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 ANKIB1Q9P2G1 1089 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 HCN2Q9UL51 889 aa7.33□□□□□ -1.24
SKP1-205ENST00000519054 NSFL1CQ9UNZ2 370 aaKnown RBP7.33□□□□□ -1.24
SKP1-205ENST00000519054 BMP4P12644 408 aa7.32□□□□□ -1.24
SKP1-205ENST00000519054 DGKZQ13574 1117 aa7.32□□□□□ -1.24
SKP1-205ENST00000519054 CAPN12Q6ZSI9 719 aa7.32□□□□□ -1.24
SKP1-205ENST00000519054 CEP63Q96MT8 703 aa7.32□□□□□ -1.24
SKP1-205ENST00000519054 STRN4Q9NRL3 753 aa7.32□□□□□ -1.24
SKP1-205ENST00000519054 C2CD2LO14523 706 aa7.31□□□□□ -1.24
SKP1-205ENST00000519054 EFSO43281 561 aa7.31□□□□□ -1.24
SKP1-205ENST00000519054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.31□□□□□ -1.244e-6■■■■■ 41.3
SKP1-205ENST00000519054 MAP2K3P46734 347 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
SKP1-205ENST00000519054 NAA30Q147X3 362 aaPredicted RBP7.3□□□□□ -1.24
SKP1-205ENST00000519054 HIF1AQ16665 826 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 ZNF385CQ66K41 422 aaPredicted RBP7.3□□□□□ -1.24
SKP1-205ENST00000519054 LYPD4Q6UWN0 246 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 BTLAQ7Z6A9 289 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 SVOPQ8N4V2 548 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 BRD7Q9NPI1 651 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 MARK1Q9P0L2 795 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 LRFN2Q9ULH4 789 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 BCS1LQ9Y276 419 aa7.3□□□□□ -1.24
SKP1-205ENST00000519054 TYRO3Q06418 890 aa7.29□□□□□ -1.24
SKP1-205ENST00000519054 GRIN2CQ14957 1233 aa7.29□□□□□ -1.24
SKP1-205ENST00000519054 COX20Q5RI15 118 aa7.29□□□□□ -1.24
SKP1-205ENST00000519054 ACDQ96AP0 544 aa7.29□□□□□ -1.24
SKP1-205ENST00000519054 MYO19Q96H55 970 aa7.29□□□□□ -1.24
SKP1-205ENST00000519054 SAP130Q9H0E3 1048 aa7.29□□□□□ -1.24
SKP1-205ENST00000519054 TGFBR3LH3BV60 316 aa7.28□□□□□ -1.24
SKP1-205ENST00000519054 CELA2BP08218 269 aaPredicted RBP7.28□□□□□ -1.24
SKP1-205ENST00000519054 SCNN1AP37088 669 aa7.28□□□□□ -1.24
SKP1-205ENST00000519054 LAMC2Q13753 1193 aa7.28□□□□□ -1.24
SKP1-205ENST00000519054 C11orf91Q3C1V1 193 aa7.28□□□□□ -1.24
SKP1-205ENST00000519054 COL26A1Q96A83 441 aa7.28□□□□□ -1.24
SKP1-205ENST00000519054 OXCT2Q9BYC2 517 aaPredicted RBP7.28□□□□□ -1.24
SKP1-205ENST00000519054 STK17AQ9UEE5 414 aa7.28□□□□□ -1.24
SKP1-205ENST00000519054 PTCD1O75127 700 aaKnown RBP7.27□□□□□ -1.25
SKP1-205ENST00000519054 FAM182BQ5T319 152 aa7.27□□□□□ -1.25
SKP1-205ENST00000519054 C16orf46Q6P387 395 aa7.27□□□□□ -1.25
SKP1-205ENST00000519054 RETREG2Q8NC44 543 aa7.27□□□□□ -1.25
SKP1-205ENST00000519054 SEPT3Q9UH03 358 aa7.27□□□□□ -1.25
SKP1-205ENST00000519054 SSFA2P28290 1259 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 MAP3K10Q02779 954 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 IER5Q5VY09 327 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 IFT43Q96FT9 208 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 DMGDHQ9UI17 866 aaKnown RBP7.26□□□□□ -1.25
SKP1-205ENST00000519054 GGA1Q9UJY5 639 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 PRR12Q9ULL5 1215 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 KCNH4Q9UQ05 1017 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 USTQ9Y2C2 406 aa7.26□□□□□ -1.25
SKP1-205ENST00000519054 FAM181BA6NEQ2 426 aa7.25□□□□□ -1.25
SKP1-205ENST00000519054 MICAL2O94851 1124 aa7.25□□□□□ -1.25
SKP1-205ENST00000519054 BCRP11274 1271 aa7.25□□□□□ -1.25
SKP1-205ENST00000519054 IDH3AP50213 366 aa7.25□□□□□ -1.25
SKP1-205ENST00000519054 SLC30A3Q99726 388 aa7.25□□□□□ -1.25
SKP1-205ENST00000519054 NEURL1BA8MQ27 555 aa7.24□□□□□ -1.25
SKP1-205ENST00000519054 ARAFP10398 606 aa7.24□□□□□ -1.25
SKP1-205ENST00000519054 KCNQ4P56696 695 aa7.24□□□□□ -1.25
SKP1-205ENST00000519054 PCBP4P57723 403 aaKnown RBP7.24□□□□□ -1.25
SKP1-205ENST00000519054 SPEM2Q0P670 501 aa7.24□□□□□ -1.25
SKP1-205ENST00000519054 PHLDB3Q6NSJ2 640 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms