RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 ALDH1L2Q3SY69 923 aa31.04■■■□□ 2.56
PCM1-209ENST00000518930 PHAXQ9H814 394 aaKnown RBP31.04■■■□□ 2.56
PCM1-209ENST00000518930 MSL1Q68DK7 614 aa31.03■■■□□ 2.56
PCM1-209ENST00000518930 ZBTB3Q9H5J0 574 aa31.03■■■□□ 2.56
PCM1-209ENST00000518930 DDX58O95786 925 aaKnown RBP31.02■■■□□ 2.56
PCM1-209ENST00000518930 NLGN1Q8N2Q7 840 aa31.02■■■□□ 2.56
PCM1-209ENST00000518930 SMC4Q9NTJ3 1288 aa31.02■■■□□ 2.56
PCM1-209ENST00000518930 COL24A1Q17RW2 1714 aa31.01■■■□□ 2.56
PCM1-209ENST00000518930 NUP98P52948 1817 aa31.01■■■□□ 2.56
PCM1-209ENST00000518930 ERVV-1B6SEH8 477 aa31.01■■■□□ 2.55
PCM1-209ENST00000518930 RGL2O15211 777 aa31.01■■■□□ 2.55
PCM1-209ENST00000518930 SSH1Q8WYL5 1049 aa31.01■■■□□ 2.55
PCM1-209ENST00000518930 ARFGEF2Q9Y6D5 1785 aa31.01■■■□□ 2.55
PCM1-209ENST00000518930 BCL2L13Q9BXK5 485 aa31■■■□□ 2.55
PCM1-209ENST00000518930 FLIIQ13045 1269 aa30.99■■■□□ 2.55
PCM1-209ENST00000518930 FKBP8Q14318 412 aa30.99■■■□□ 2.55
PCM1-209ENST00000518930 CLEC4GQ6UXB4 293 aa30.99■■■□□ 2.55
PCM1-209ENST00000518930 BCL2L12Q9HB09 334 aa30.99■■■□□ 2.55
PCM1-209ENST00000518930 ATF5Q9Y2D1 282 aaPredicted RBP30.99■■■□□ 2.55
PCM1-209ENST00000518930 RARSP54136 660 aaKnown RBP30.98■■■□□ 2.55
PCM1-209ENST00000518930 G2E3Q7L622 706 aa30.98■■■□□ 2.55
PCM1-209ENST00000518930 MRPL50Q8N5N7 158 aaKnown RBP30.98■■■□□ 2.55
PCM1-209ENST00000518930 PLBD2Q8NHP8 589 aa30.98■■■□□ 2.55
PCM1-209ENST00000518930 SPON1Q9HCB6 807 aa30.98■■■□□ 2.55
PCM1-209ENST00000518930 ANKRD36CQ5JPF3 1778 aa30.97■■■□□ 2.55
PCM1-209ENST00000518930 FKBP5Q13451 457 aaPredicted RBP30.97■■■□□ 2.55
PCM1-209ENST00000518930 ANKRD13DQ6ZTN6 518 aa30.97■■■□□ 2.55
PCM1-209ENST00000518930 POLD1P28340 1107 aa30.96■■■□□ 2.55
PCM1-209ENST00000518930 RIC3Q7Z5B4 369 aa30.96■■■□□ 2.55
PCM1-209ENST00000518930 HLFQ16534 295 aa30.95■■■□□ 2.55
PCM1-209ENST00000518930 GIGYF2Q6Y7W6 1299 aaKnown RBP30.95■■■□□ 2.55
PCM1-209ENST00000518930 HSP90AB3PQ58FF7 597 aa30.94■■■□□ 2.54
PCM1-209ENST00000518930 ATP10DQ9P241 1426 aa30.94■■■□□ 2.54
PCM1-209ENST00000518930 BICDL1Q6ZP65 573 aa30.93■■■□□ 2.54
PCM1-209ENST00000518930 MMP10P09238 476 aa30.92■■■□□ 2.54
PCM1-209ENST00000518930 TBC1D9BQ66K14 1250 aa30.92■■■□□ 2.54
PCM1-209ENST00000518930 KIF16BQ96L93 1317 aa30.92■■■□□ 2.54
PCM1-209ENST00000518930 NFIXQ14938 502 aa30.91■■■□□ 2.54
PCM1-209ENST00000518930 KSR2Q6VAB6 950 aa30.91■■■□□ 2.54
PCM1-209ENST00000518930 PARP3Q9Y6F1 533 aa30.91■■■□□ 2.54
PCM1-209ENST00000518930 PTPRCP08575 1304 aa30.91■■■□□ 2.54
PCM1-209ENST00000518930 PI4KAP2A4QPH2 592 aa30.9■■■□□ 2.54
PCM1-209ENST00000518930 PI4KAP1Q8N8J0 262 aa30.9■■■□□ 2.54
PCM1-209ENST00000518930 SETDB2Q96T68 719 aa30.9■■■□□ 2.54
PCM1-209ENST00000518930 NIP7Q9Y221 180 aaKnown RBP eCLIP30.9■■■□□ 2.54
PCM1-209ENST00000518930 LRP5O75197 1615 aa30.9■■■□□ 2.54
PCM1-209ENST00000518930 ADCY9O60503 1353 aa30.9■■■□□ 2.54
PCM1-209ENST00000518930 CARMIL3Q8ND23 1372 aa30.9■■■□□ 2.54
PCM1-209ENST00000518930 BRPF1P55201 1214 aaPredicted RBP30.89■■■□□ 2.54
PCM1-209ENST00000518930 MAP3K2Q9Y2U5 619 aa30.89■■■□□ 2.54
PCM1-209ENST00000518930 TM4SF1P30408 202 aa30.88■■■□□ 2.53
PCM1-209ENST00000518930 PTGER2P43116 358 aa30.87■■■□□ 2.53
PCM1-209ENST00000518930 TCIRG1Q13488 830 aa30.87■■■□□ 2.53
PCM1-209ENST00000518930 BCAR3O75815 825 aa30.86■■■□□ 2.53
PCM1-209ENST00000518930 GPTP24298 496 aa30.86■■■□□ 2.53
PCM1-209ENST00000518930 NEXNQ0ZGT2 675 aa30.86■■■□□ 2.53
PCM1-209ENST00000518930 SGIP1Q9BQI5 828 aa30.86■■■□□ 2.53
PCM1-209ENST00000518930 RCAN3Q9UKA8 241 aa30.86■■■□□ 2.53
PCM1-209ENST00000518930 AFDNP55196 1824 aaKnown RBP30.85■■■□□ 2.53
PCM1-209ENST00000518930 POLRMTO00411 1230 aaKnown RBP30.85■■■□□ 2.53
PCM1-209ENST00000518930 DDR1Q08345 913 aa30.85■■■□□ 2.53
PCM1-209ENST00000518930 DNAAF4Q8WXU2 420 aa30.85■■■□□ 2.53
PCM1-209ENST00000518930 METTL22Q9BUU2 404 aaPredicted RBP30.85■■■□□ 2.53
PCM1-209ENST00000518930 NOB1Q9ULX3 412 aaKnown RBP30.85■■■□□ 2.53
PCM1-209ENST00000518930 PARP10Q53GL7 1025 aa30.84■■■□□ 2.53
PCM1-209ENST00000518930 ZNF34Q8IZ26 560 aa30.84■■■□□ 2.53
PCM1-209ENST00000518930 MYD88Q99836 296 aa30.84■■■□□ 2.53
PCM1-209ENST00000518930 NPHP1O15259 732 aa30.83■■■□□ 2.53
PCM1-209ENST00000518930 NRXN2Q9P2S2 1712 aa30.83■■■□□ 2.53
PCM1-209ENST00000518930 UBN2Q6ZU65 1347 aa30.82■■■□□ 2.52
PCM1-209ENST00000518930 IPO8O15397 1037 aaKnown RBP30.82■■■□□ 2.52
PCM1-209ENST00000518930 SERPINB2P05120 415 aa30.82■■■□□ 2.52
PCM1-209ENST00000518930 FRAT1Q92837 279 aaPredicted RBP30.82■■■□□ 2.52
PCM1-209ENST00000518930 PPP1R1BQ9UD71 204 aaPredicted RBP30.82■■■□□ 2.52
PCM1-209ENST00000518930 F6X3S4 739 aa30.81■■■□□ 2.52
PCM1-209ENST00000518930 NBPF5PQ86XG9 351 aaPredicted RBP30.81■■■□□ 2.52
PCM1-209ENST00000518930 API5Q9BZZ5 524 aaKnown RBP30.81■■■□□ 2.52
PCM1-209ENST00000518930 ATP5J2-PTCD1G3V325 749 aa30.8■■■□□ 2.52
PCM1-209ENST00000518930 PPP1R42Q7Z4L9 355 aa30.8■■■□□ 2.52
PCM1-209ENST00000518930 ISCA1Q9BUE6 129 aa30.8■■■□□ 2.52
PCM1-209ENST00000518930 NYXQ9GZU5 481 aa30.8■■■□□ 2.52
PCM1-209ENST00000518930 PXDNLA1KZ92 1463 aa30.8■■■□□ 2.52
PCM1-209ENST00000518930 IBTKQ9P2D0 1353 aaPredicted RBP30.79■■■□□ 2.52
PCM1-209ENST00000518930 FAM177BA6PVY3 158 aa30.79■■■□□ 2.52
PCM1-209ENST00000518930 SLC4A10Q6U841 1118 aa30.79■■■□□ 2.52
PCM1-209ENST00000518930 CNBD1Q8NA66 436 aa30.79■■■□□ 2.52
PCM1-209ENST00000518930 ARHGAP45Q92619 1136 aa30.79■■■□□ 2.52
PCM1-209ENST00000518930 NLRP10Q86W26 655 aa30.78■■■□□ 2.52
PCM1-209ENST00000518930 TPTE2Q6XPS3 522 aa30.77■■■□□ 2.52
PCM1-209ENST00000518930 N4BP2Q86UW6 1770 aaPredicted RBP30.77■■■□□ 2.52
PCM1-209ENST00000518930 GTF2E1P29083 439 aaPredicted RBP30.76■■■□□ 2.51
PCM1-209ENST00000518930 TRIM28Q13263 835 aaKnown RBP30.76■■■□□ 2.51
PCM1-209ENST00000518930 SUSD4Q5VX71 490 aa30.76■■■□□ 2.51
PCM1-209ENST00000518930 ZKSCAN2Q63HK3 967 aa30.76■■■□□ 2.51
PCM1-209ENST00000518930 CCDC191Q8NCU4 936 aa30.76■■■□□ 2.51
PCM1-209ENST00000518930 LINS1Q8NG48 757 aa30.76■■■□□ 2.51
PCM1-209ENST00000518930 UTP14AQ9BVJ6 771 aaKnown RBP30.76■■■□□ 2.51
PCM1-209ENST00000518930 ST5P78524 1137 aa30.75■■■□□ 2.51
PCM1-209ENST00000518930 CWC25Q9NXE8 425 aaPredicted RBP30.75■■■□□ 2.51
PCM1-209ENST00000518930 RNF123Q5XPI4 1314 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms