RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 MTMR14Q8NCE2 650 aa9.87□□□□□ -0.83
CCDC6-203ENST00000518638 SNRKQ9NRH2 765 aa9.87□□□□□ -0.83
CCDC6-203ENST00000518638 LRRC9Q6ZRR7 1453 aa9.86□□□□□ -0.83
CCDC6-203ENST00000518638 K7ELQ4 463 aaPredicted RBP9.86□□□□□ -0.83
CCDC6-203ENST00000518638 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
CCDC6-203ENST00000518638 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
CCDC6-203ENST00000518638 KIF3BO15066 747 aa9.85□□□□□ -0.83
CCDC6-203ENST00000518638 MCM6Q14566 821 aa9.85□□□□□ -0.83
CCDC6-203ENST00000518638 NR6A1Q15406 480 aa9.85□□□□□ -0.83
CCDC6-203ENST00000518638 NEDD1Q8NHV4 660 aa9.85□□□□□ -0.83
CCDC6-203ENST00000518638 TRIM34Q9BYJ4 488 aa9.85□□□□□ -0.83
CCDC6-203ENST00000518638 SCAF11Q99590 1463 aaKnown RBP9.85□□□□□ -0.83
CCDC6-203ENST00000518638 INTS6LQ5JSJ4 861 aaKnown RBP9.84□□□□□ -0.83
CCDC6-203ENST00000518638 POTEAQ6S8J7 498 aa9.84□□□□□ -0.83
CCDC6-203ENST00000518638 ARHGAP9Q9BRR9 750 aa9.84□□□□□ -0.83
CCDC6-203ENST00000518638 ZNF395Q9H8N7 513 aaPredicted RBP9.84□□□□□ -0.83
CCDC6-203ENST00000518638 CUEDC1Q9NWM3 386 aaPredicted RBP9.84□□□□□ -0.83
CCDC6-203ENST00000518638 MTUS2Q5JR59 1369 aa9.84□□□□□ -0.83
CCDC6-203ENST00000518638 MBD5Q9P267 1494 aa9.84□□□□□ -0.83
CCDC6-203ENST00000518638 SETD1AO15047 1707 aaKnown RBP9.83□□□□□ -0.84
CCDC6-203ENST00000518638 APBB1O00213 710 aa9.83□□□□□ -0.84
CCDC6-203ENST00000518638 BCRP11274 1271 aa9.83□□□□□ -0.84
CCDC6-203ENST00000518638 FLIIQ13045 1269 aa9.83□□□□□ -0.84
CCDC6-203ENST00000518638 EPS8L1Q8TE68 723 aa9.83□□□□□ -0.84
CCDC6-203ENST00000518638 CCDC141Q6ZP82 1450 aa9.83□□□□□ -0.84
CCDC6-203ENST00000518638 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
CCDC6-203ENST00000518638 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
CCDC6-203ENST00000518638 PDXDC2PQ6P474 469 aa9.82□□□□□ -0.84
CCDC6-203ENST00000518638 UBR1Q8IWV7 1749 aa9.82□□□□□ -0.84
CCDC6-203ENST00000518638 EHBP1L1Q8N3D4 1523 aa9.82□□□□□ -0.84
CCDC6-203ENST00000518638 ROBO1Q9Y6N7 1651 aa9.81□□□□□ -0.84
CCDC6-203ENST00000518638 TIAM1Q13009 1591 aa9.81□□□□□ -0.84
CCDC6-203ENST00000518638 LYSMD3Q7Z3D4 306 aa9.81□□□□□ -0.84
CCDC6-203ENST00000518638 Q8N3U1 123 aa9.81□□□□□ -0.84
CCDC6-203ENST00000518638 GMCL1Q96IK5 515 aa9.81□□□□□ -0.84
CCDC6-203ENST00000518638 FKBPLQ9UIM3 349 aa9.81□□□□□ -0.84
CCDC6-203ENST00000518638 SLIT1O75093 1534 aa9.81□□□□□ -0.84
CCDC6-203ENST00000518638 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
CCDC6-203ENST00000518638 ERVK-7P63135 1459 aa9.8□□□□□ -0.84
CCDC6-203ENST00000518638 ADH1AP07327 375 aa9.8□□□□□ -0.84
CCDC6-203ENST00000518638 FOXR1Q6PIV2 292 aa9.8□□□□□ -0.84
CCDC6-203ENST00000518638 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
CCDC6-203ENST00000518638 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
CCDC6-203ENST00000518638 ZNF837Q96EG3 531 aaPredicted RBP9.8□□□□□ -0.84
CCDC6-203ENST00000518638 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
CCDC6-203ENST00000518638 EID1Q9Y6B2 187 aa9.8□□□□□ -0.84
CCDC6-203ENST00000518638 EIF2AK4Q9P2K8 1649 aaKnown RBP9.8□□□□□ -0.84
CCDC6-203ENST00000518638 ARHGAP23Q9P227 1491 aa9.79□□□□□ -0.84
CCDC6-203ENST00000518638 JCADQ9P266 1359 aa9.79□□□□□ -0.84
CCDC6-203ENST00000518638 ABCC3O15438 1527 aa9.79□□□□□ -0.84
CCDC6-203ENST00000518638 NDUFB9Q9Y6M9 179 aa9.79□□□□□ -0.84
CCDC6-203ENST00000518638 ZNF772Q68DY9 489 aaPredicted RBP9.78□□□□□ -0.84
CCDC6-203ENST00000518638 TRIM22Q8IYM9 498 aa9.78□□□□□ -0.84
CCDC6-203ENST00000518638 PSMG3-AS1Q96PY0 264 aa9.78□□□□□ -0.84
CCDC6-203ENST00000518638 PHLPP1O60346 1717 aa9.78□□□□□ -0.84
CCDC6-203ENST00000518638 NKTRP30414 1462 aaKnown RBP9.78□□□□□ -0.84
CCDC6-203ENST00000518638 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.84
CCDC6-203ENST00000518638 ARHGEF5Q12774 1597 aa9.77□□□□□ -0.85
CCDC6-203ENST00000518638 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
CCDC6-203ENST00000518638 CAMSAP2Q08AD1 1489 aa9.77□□□□□ -0.85
CCDC6-203ENST00000518638 GPR25O00155 361 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 GPR37L1O60883 481 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 PTGIRP43119 386 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 BAG6P46379 1132 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 TXNDC2Q86VQ3 553 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 ZNF784Q8NCA9 323 aaPredicted RBP9.76□□□□□ -0.85
CCDC6-203ENST00000518638 ACDQ96AP0 544 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 ARXQ96QS3 562 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 PRM3Q9NNZ6 103 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 LRRC4BQ9NT99 713 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 SPATA31A6Q5VVP1 1343 aa9.76□□□□□ -0.85
CCDC6-203ENST00000518638 MSH6P52701 1360 aa9.75□□□□□ -0.85
CCDC6-203ENST00000518638 TMEM94Q12767 1356 aa9.75□□□□□ -0.85
CCDC6-203ENST00000518638 FGD6Q6ZV73 1430 aa9.75□□□□□ -0.85
CCDC6-203ENST00000518638 CDK12Q9NYV4 1490 aaPredicted RBP9.75□□□□□ -0.85
CCDC6-203ENST00000518638 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
CCDC6-203ENST00000518638 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
CCDC6-203ENST00000518638 TBC1D2BQ9UPU7 963 aa9.75□□□□□ -0.85
CCDC6-203ENST00000518638 PRDM15P57071 1507 aaPredicted RBP9.75□□□□□ -0.85
CCDC6-203ENST00000518638 MAP3K1Q13233 1512 aa9.75□□□□□ -0.85
CCDC6-203ENST00000518638 ZNF644Q9H582 1327 aaPredicted RBP9.75□□□□□ -0.85
CCDC6-203ENST00000518638 NCOA2Q15596 1464 aa9.74□□□□□ -0.85
CCDC6-203ENST00000518638 NBPF20Q3BBV1 942 aa9.74□□□□□ -0.85
CCDC6-203ENST00000518638 TMPRSS4Q9NRS4 437 aa9.74□□□□□ -0.85
CCDC6-203ENST00000518638 NWD1Q149M9 1564 aa9.74□□□□□ -0.85
CCDC6-203ENST00000518638 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 MAST1Q9Y2H9 1570 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 RHOQP17081 205 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 KCNA6P17658 529 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 MEX3CQ5U5Q3 659 aaKnown RBP9.73□□□□□ -0.85
CCDC6-203ENST00000518638 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 PRICKLE2Q7Z3G6 844 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 GPSM3Q9Y4H4 160 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 CEP152O94986 1710 aa9.73□□□□□ -0.85
CCDC6-203ENST00000518638 LTKP29376 864 aa9.72□□□□□ -0.85
CCDC6-203ENST00000518638 TRERF1Q96PN7 1200 aa9.72□□□□□ -0.85
CCDC6-203ENST00000518638 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
CCDC6-203ENST00000518638 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
CCDC6-203ENST00000518638 TMEM2Q9UHN6 1383 aa9.72□□□□□ -0.85
CCDC6-203ENST00000518638 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms