RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 ALBP02768 609 aa8.49□□□□□ -1.05
SMN1-210ENST00000518504 SEMA3FQ13275 785 aa8.49□□□□□ -1.05
SMN1-210ENST00000518504 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMN1-210ENST00000518504 L3MBTL2Q969R5 705 aa8.49□□□□□ -1.05
SMN1-210ENST00000518504 STARD13Q9Y3M8 1113 aa8.49□□□□□ -1.05
SMN1-210ENST00000518504 TRIM28Q13263 835 aaKnown RBP8.48□□□□□ -1.05
SMN1-210ENST00000518504 SH3PXD2AQ5TCZ1 1133 aa8.48□□□□□ -1.05
SMN1-210ENST00000518504 SCHIP1Q9P0W5 487 aaPredicted RBP8.48□□□□□ -1.05
SMN1-210ENST00000518504 SIN3BO75182 1162 aa8.47□□□□□ -1.05
SMN1-210ENST00000518504 PSME1Q06323 249 aa8.47□□□□□ -1.05
SMN1-210ENST00000518504 PRSS36Q5K4E3 855 aa8.47□□□□□ -1.05
SMN1-210ENST00000518504 MICALL1Q8N3F8 863 aa8.47□□□□□ -1.05
SMN1-210ENST00000518504 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
SMN1-210ENST00000518504 ZNF358Q9NW07 568 aa8.47□□□□□ -1.05
SMN1-210ENST00000518504 ZNF232Q9UNY5 417 aa8.47□□□□□ -1.05
SMN1-210ENST00000518504 BACH1O14867 736 aa8.46□□□□□ -1.06
SMN1-210ENST00000518504 NOS2P35228 1153 aa8.46□□□□□ -1.06
SMN1-210ENST00000518504 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
SMN1-210ENST00000518504 ZFP64Q9NPA5 681 aa8.46□□□□□ -1.06
SMN1-210ENST00000518504 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
SMN1-210ENST00000518504 EML1O00423 815 aa8.45□□□□□ -1.06
SMN1-210ENST00000518504 GTF2IP78347 998 aa8.45□□□□□ -1.06
SMN1-210ENST00000518504 ARTNQ5T4W7 220 aa8.45□□□□□ -1.06
SMN1-210ENST00000518504 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
SMN1-210ENST00000518504 SKIP12755 728 aa8.44□□□□□ -1.06
SMN1-210ENST00000518504 ADH7P40394 386 aa8.44□□□□□ -1.06
SMN1-210ENST00000518504 TEAD4Q15561 434 aa8.44□□□□□ -1.06
SMN1-210ENST00000518504 EML3Q32P44 896 aa8.44□□□□□ -1.06
SMN1-210ENST00000518504 SLC9A9Q8IVB4 645 aa8.44□□□□□ -1.06
SMN1-210ENST00000518504 TNFRSF25Q93038 417 aa8.44□□□□□ -1.06
SMN1-210ENST00000518504 NID1P14543 1247 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 TBC1D8BQ0IIM8 1120 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 SPEM2Q0P670 501 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 RHPN1Q8TCX5 695 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 C7orf43Q8WVR3 580 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 NACC1Q96RE7 527 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 NOD1Q9Y239 953 aa8.43□□□□□ -1.06
SMN1-210ENST00000518504 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
SMN1-210ENST00000518504 HSH2DQ96JZ2 352 aa8.42□□□□□ -1.06
SMN1-210ENST00000518504 EPHA4P54764 986 aa8.41□□□□□ -1.06
SMN1-210ENST00000518504 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
SMN1-210ENST00000518504 CEP63Q96MT8 703 aa8.41□□□□□ -1.06
SMN1-210ENST00000518504 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
SMN1-210ENST00000518504 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
SMN1-210ENST00000518504 SERTM1A2A2V5 107 aa8.4□□□□□ -1.06
SMN1-210ENST00000518504 SFI1A8K8P3 1242 aa8.4□□□□□ -1.06
SMN1-210ENST00000518504 NCOA4Q13772 614 aa8.4□□□□□ -1.06
SMN1-210ENST00000518504 IGFLR1Q9H665 355 aa8.4□□□□□ -1.06
SMN1-210ENST00000518504 HCN4Q9Y3Q4 1203 aa8.4□□□□□ -1.06
SMN1-210ENST00000518504 SELPP16109 830 aa8.39□□□□□ -1.07
SMN1-210ENST00000518504 SHISA2Q6UWI4 295 aa8.39□□□□□ -1.07
SMN1-210ENST00000518504 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
SMN1-210ENST00000518504 ZNF280CQ8ND82 737 aa8.39□□□□□ -1.07
SMN1-210ENST00000518504 SOX11P35716 441 aa8.38□□□□□ -1.07
SMN1-210ENST00000518504 NEUROD1Q13562 356 aa8.38□□□□□ -1.07
SMN1-210ENST00000518504 MBTPS1Q14703 1052 aa8.38□□□□□ -1.07
SMN1-210ENST00000518504 BHMTQ93088 406 aa8.38□□□□□ -1.07
SMN1-210ENST00000518504 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
SMN1-210ENST00000518504 C9orf172C9J069 976 aa8.37□□□□□ -1.07
SMN1-210ENST00000518504 LILRB5O75023 590 aa8.37□□□□□ -1.07
SMN1-210ENST00000518504 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
SMN1-210ENST00000518504 LCE3BQ5TA77 95 aa8.37□□□□□ -1.07
SMN1-210ENST00000518504 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
SMN1-210ENST00000518504 KRTAP4-12Q9BQ66 201 aa8.37□□□□□ -1.07
SMN1-210ENST00000518504 UBE2OQ9C0C9 1292 aaKnown RBP8.36□□□□□ -1.07
SMN1-210ENST00000518504 PHACTR1Q9C0D0 580 aa8.36□□□□□ -1.07
SMN1-210ENST00000518504 TSPAN10Q9H1Z9 355 aaPredicted RBP8.36□□□□□ -1.07
SMN1-210ENST00000518504 JPH1Q9HDC5 661 aaPredicted RBP8.36□□□□□ -1.07
SMN1-210ENST00000518504 TPCN2Q8NHX9 752 aa8.35□□□□□ -1.07
SMN1-210ENST00000518504 TP53INP1Q96A56 240 aa8.35□□□□□ -1.07
SMN1-210ENST00000518504 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
SMN1-210ENST00000518504 KCNH4Q9UQ05 1017 aa8.35□□□□□ -1.07
SMN1-210ENST00000518504 GPC6Q9Y625 555 aaPredicted RBP8.35□□□□□ -1.07
SMN1-210ENST00000518504 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
SMN1-210ENST00000518504 ELNP15502 786 aa8.34□□□□□ -1.07
SMN1-210ENST00000518504 TYRO3Q06418 890 aa8.34□□□□□ -1.07
SMN1-210ENST00000518504 TXNRD3Q86VQ6 643 aa8.34□□□□□ -1.07
SMN1-210ENST00000518504 HYAL3O43820 417 aaPredicted RBP8.33□□□□□ -1.08
SMN1-210ENST00000518504 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
SMN1-210ENST00000518504 H2AFB2P0C5Z0 115 aa8.33□□□□□ -1.08
SMN1-210ENST00000518504 LRP8Q14114 963 aa8.33□□□□□ -1.08
SMN1-210ENST00000518504 SUSD3Q96L08 255 aa8.33□□□□□ -1.08
SMN1-210ENST00000518504 ALG2Q9H553 416 aa8.33□□□□□ -1.08
SMN1-210ENST00000518504 USP21Q9UK80 565 aa8.33□□□□□ -1.08
SMN1-210ENST00000518504 SLC6A14Q9UN76 642 aa8.33□□□□□ -1.08
SMN1-210ENST00000518504 ZBTB7BO15156 539 aaPredicted RBP8.32□□□□□ -1.08
SMN1-210ENST00000518504 KCNQ4P56696 695 aa8.32□□□□□ -1.08
SMN1-210ENST00000518504 PSMA6P60900 246 aaKnown RBP8.32□□□□□ -1.08
SMN1-210ENST00000518504 DMRTC2Q8IXT2 367 aaPredicted RBP8.32□□□□□ -1.08
SMN1-210ENST00000518504 LZTS3O60299 673 aaPredicted RBP8.31□□□□□ -1.08
SMN1-210ENST00000518504 RAC1P63000 192 aa8.31□□□□□ -1.08
SMN1-210ENST00000518504 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
SMN1-210ENST00000518504 MCM6Q14566 821 aa8.31□□□□□ -1.08
SMN1-210ENST00000518504 C1orf53Q5VUE5 145 aa8.31□□□□□ -1.08
SMN1-210ENST00000518504 CCDC102BQ68D86 513 aa8.31□□□□□ -1.08
SMN1-210ENST00000518504 LENG1Q96BZ8 264 aaPredicted RBP8.31□□□□□ -1.08
SMN1-210ENST00000518504 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
SMN1-210ENST00000518504 COG6Q9Y2V7 657 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms