RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 DLG5Q8TDM6 1919 aa13.87□□□□□ -0.19
SPIDR-205ENST00000518060 AFDNP55196 1824 aaKnown RBP13.86□□□□□ -0.19
SPIDR-205ENST00000518060 RASSF7Q02833 373 aa13.86□□□□□ -0.19
SPIDR-205ENST00000518060 NRXN2Q9P2S2 1712 aa13.86□□□□□ -0.19
SPIDR-205ENST00000518060 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
SPIDR-205ENST00000518060 EIF2S2P20042 333 aaKnown RBP13.85□□□□□ -0.19
SPIDR-205ENST00000518060 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
SPIDR-205ENST00000518060 CLEC4GQ6UXB4 293 aa13.85□□□□□ -0.19
SPIDR-205ENST00000518060 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
SPIDR-205ENST00000518060 LAMB4A4D0S4 1761 aa13.85□□□□□ -0.19
SPIDR-205ENST00000518060 BCORQ6W2J9 1755 aa13.85□□□□□ -0.19
SPIDR-205ENST00000518060 BRCA1P38398 1863 aaKnown RBP13.84□□□□□ -0.19
SPIDR-205ENST00000518060 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
SPIDR-205ENST00000518060 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
SPIDR-205ENST00000518060 PDZRN3Q9UPQ7 1066 aa13.84□□□□□ -0.19
SPIDR-205ENST00000518060 HLFQ16534 295 aa13.83□□□□□ -0.2
SPIDR-205ENST00000518060 C21orf2O43822 256 aa13.82□□□□□ -0.2
SPIDR-205ENST00000518060 GPTP24298 496 aa13.82□□□□□ -0.2
SPIDR-205ENST00000518060 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
SPIDR-205ENST00000518060 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
SPIDR-205ENST00000518060 ARFGEF1Q9Y6D6 1849 aa13.82□□□□□ -0.2
SPIDR-205ENST00000518060 MAP3K15Q6ZN16 1313 aa13.82□□□□□ -0.2
SPIDR-205ENST00000518060 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
SPIDR-205ENST00000518060 MASTLQ96GX5 879 aa13.81□□□□□ -0.2
SPIDR-205ENST00000518060 ERBB4Q15303 1308 aa13.81□□□□□ -0.2
SPIDR-205ENST00000518060 ANXA1P04083 346 aa13.8□□□□□ -0.2
SPIDR-205ENST00000518060 LMNB1P20700 586 aa13.8□□□□□ -0.2
SPIDR-205ENST00000518060 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
SPIDR-205ENST00000518060 PRPF40BQ6NWY9 871 aaKnown RBP13.8□□□□□ -0.2
SPIDR-205ENST00000518060 C16orf71Q8IYS4 520 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-205ENST00000518060 NMRK2Q9NPI5 230 aa13.8□□□□□ -0.2
SPIDR-205ENST00000518060 BABAM1Q9NWV8 329 aa13.8□□□□□ -0.2
SPIDR-205ENST00000518060 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
SPIDR-205ENST00000518060 KDM2BQ8NHM5 1336 aa13.8□□□□□ -0.2
SPIDR-205ENST00000518060 COL11A2P13942 1736 aaPredicted RBP13.79□□□□□ -0.2
SPIDR-205ENST00000518060 DLEC1Q9Y238 1755 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 ANKRD31Q8N7Z5 1873 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 ERVV-1B6SEH8 477 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 RGL2O15211 777 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 SRGNP10124 158 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 AIMP1Q12904 312 aaKnown RBP13.79□□□□□ -0.2
SPIDR-205ENST00000518060 KRT24Q2M2I5 525 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 NUTM1Q86Y26 1132 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 NYXQ9GZU5 481 aa13.79□□□□□ -0.2
SPIDR-205ENST00000518060 APAF1O14727 1248 aa13.78□□□□□ -0.2
SPIDR-205ENST00000518060 KIF3CO14782 793 aa13.78□□□□□ -0.2
SPIDR-205ENST00000518060 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
SPIDR-205ENST00000518060 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
SPIDR-205ENST00000518060 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-205ENST00000518060 NFKBIEO00221 500 aa13.77□□□□□ -0.21
SPIDR-205ENST00000518060 CHL1O00533 1208 aa13.77□□□□□ -0.21
SPIDR-205ENST00000518060 NPR1P16066 1061 aa13.77□□□□□ -0.21
SPIDR-205ENST00000518060 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
SPIDR-205ENST00000518060 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
SPIDR-205ENST00000518060 ABCC12Q96J65 1359 aa13.77□□□□□ -0.21
SPIDR-205ENST00000518060 UBN2Q6ZU65 1347 aa13.76□□□□□ -0.21
SPIDR-205ENST00000518060 ANP32CO43423 234 aa13.76□□□□□ -0.21
SPIDR-205ENST00000518060 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
SPIDR-205ENST00000518060 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
SPIDR-205ENST00000518060 XAGE3Q8WTP9 111 aa13.76□□□□□ -0.21
SPIDR-205ENST00000518060 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
SPIDR-205ENST00000518060 PRELPP51888 382 aa13.75□□□□□ -0.21
SPIDR-205ENST00000518060 PDIA6Q15084 440 aa13.75□□□□□ -0.21
SPIDR-205ENST00000518060 CCDC93Q567U6 631 aa13.75□□□□□ -0.21
SPIDR-205ENST00000518060 SUSD4Q5VX71 490 aa13.75□□□□□ -0.21
SPIDR-205ENST00000518060 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
SPIDR-205ENST00000518060 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
SPIDR-205ENST00000518060 RRAGCQ9HB90 399 aa13.75□□□□□ -0.21
SPIDR-205ENST00000518060 CHPF2Q9P2E5 772 aa13.75□□□□□ -0.21
SPIDR-205ENST00000518060 ZC3H4Q9UPT8 1303 aaKnown RBP13.74□□□□□ -0.21
SPIDR-205ENST00000518060 TOMM70O94826 608 aa13.74□□□□□ -0.21
SPIDR-205ENST00000518060 PPP1R42Q7Z4L9 355 aa13.74□□□□□ -0.21
SPIDR-205ENST00000518060 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
SPIDR-205ENST00000518060 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
SPIDR-205ENST00000518060 MBIPQ9NS73 344 aa13.74□□□□□ -0.21
SPIDR-205ENST00000518060 IBTKQ9P2D0 1353 aaPredicted RBP13.73□□□□□ -0.21
SPIDR-205ENST00000518060 HSPA6P17066 643 aa13.73□□□□□ -0.21
SPIDR-205ENST00000518060 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
SPIDR-205ENST00000518060 PARP10Q53GL7 1025 aa13.73□□□□□ -0.21
SPIDR-205ENST00000518060 DUSP27Q5VZP5 1158 aa13.73□□□□□ -0.21
SPIDR-205ENST00000518060 ZNF34Q8IZ26 560 aa13.73□□□□□ -0.21
SPIDR-205ENST00000518060 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
SPIDR-205ENST00000518060 UTP14AQ9BVJ6 771 aaKnown RBP13.73□□□□□ -0.21
SPIDR-205ENST00000518060 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.21
SPIDR-205ENST00000518060 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
SPIDR-205ENST00000518060 ELL2O00472 640 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-205ENST00000518060 NTSR2O95665 410 aa13.72□□□□□ -0.21
SPIDR-205ENST00000518060 ALDH1B1P30837 517 aa13.72□□□□□ -0.21
SPIDR-205ENST00000518060 GNAI1P63096 354 aa13.72□□□□□ -0.21
SPIDR-205ENST00000518060 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
SPIDR-205ENST00000518060 OLFM4Q6UX06 510 aa13.72□□□□□ -0.21
SPIDR-205ENST00000518060 LRP10Q7Z4F1 713 aa13.72□□□□□ -0.21
SPIDR-205ENST00000518060 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
SPIDR-205ENST00000518060 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
SPIDR-205ENST00000518060 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.21
SPIDR-205ENST00000518060 KLRG2A4D1S0 409 aaPredicted RBP13.71□□□□□ -0.21
SPIDR-205ENST00000518060 GLTPD2A6NH11 291 aa13.71□□□□□ -0.21
SPIDR-205ENST00000518060 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
SPIDR-205ENST00000518060 HOXB7P09629 217 aa13.71□□□□□ -0.21
SPIDR-205ENST00000518060 DPY19L2Q6NUT2 758 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms