RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 TRPM3Q9HCF6 1732 aaPredicted RBP9.4□□□□□ -0.9
CPS1-210ENST00000518043 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
CPS1-210ENST00000518043 CLUAP1Q96AJ1 413 aa9.4□□□□□ -0.9
CPS1-210ENST00000518043 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.9
CPS1-210ENST00000518043 COG6Q9Y2V7 657 aa9.4□□□□□ -0.9
CPS1-210ENST00000518043 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
CPS1-210ENST00000518043 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.91
CPS1-210ENST00000518043 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 KIF1AQ12756 1690 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 RAD21O60216 631 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 TMC1Q8TDI8 760 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 ZMYND15Q9H091 742 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.39□□□□□ -0.91
CPS1-210ENST00000518043 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 USP6P35125 1406 aa9.39□□□□□ -0.91
CPS1-210ENST00000518043 ANKLE1Q8NAG6 615 aa9.38□□□□□ -0.91
CPS1-210ENST00000518043 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
CPS1-210ENST00000518043 PLSCR2Q9NRY7 297 aa9.38□□□□□ -0.91
CPS1-210ENST00000518043 EDC4Q6P2E9 1401 aaKnown RBP9.38□□□□□ -0.91
CPS1-210ENST00000518043 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
CPS1-210ENST00000518043 ANP32CO43423 234 aa9.37□□□□□ -0.91
CPS1-210ENST00000518043 PTCRAQ6ISU1 281 aaPredicted RBP9.37□□□□□ -0.91
CPS1-210ENST00000518043 ACEP12821 1306 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 A6NJR5 290 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 CCER2I3L3R5 266 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
CPS1-210ENST00000518043 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 C19orf44Q9H6X5 657 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 NSD2O96028 1365 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
CPS1-210ENST00000518043 ABL2P42684 1182 aa9.35□□□□□ -0.91
CPS1-210ENST00000518043 PNMA1Q8ND90 353 aa9.35□□□□□ -0.91
CPS1-210ENST00000518043 TERF2IPQ9NYB0 399 aa9.35□□□□□ -0.91
CPS1-210ENST00000518043 FKBPLQ9UIM3 349 aa9.35□□□□□ -0.91
CPS1-210ENST00000518043 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
CPS1-210ENST00000518043 SHPRHQ149N8 1683 aa9.35□□□□□ -0.91
CPS1-210ENST00000518043 CRYBG1Q9Y4K1 1723 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 FYB1O15117 783 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 GPR37L1O60883 481 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 RALBP1Q15311 655 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 PLA2G2CQ5R387 149 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 ORAI2Q96SN7 254 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 MSH6P52701 1360 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 NHSL1Q5SYE7 1610 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 PXDNQ92626 1479 aa9.34□□□□□ -0.91
CPS1-210ENST00000518043 CGNL1Q0VF96 1302 aa9.33□□□□□ -0.92
CPS1-210ENST00000518043 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
CPS1-210ENST00000518043 MYBBP1AQ9BQG0 1328 aaKnown RBP9.33□□□□□ -0.92
CPS1-210ENST00000518043 HDGFL2Q7Z4V5 671 aaPredicted RBP9.33□□□□□ -0.92
CPS1-210ENST00000518043 NME9Q86XW9 330 aa9.33□□□□□ -0.92
CPS1-210ENST00000518043 ARMC2Q8NEN0 867 aa9.33□□□□□ -0.92
CPS1-210ENST00000518043 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
CPS1-210ENST00000518043 PEAK1Q9H792 1746 aa9.33□□□□□ -0.92
CPS1-210ENST00000518043 COL3A1P02461 1466 aaPredicted RBP9.33□□□□□ -0.92
CPS1-210ENST00000518043 SMG6Q86US8 1419 aaKnown RBP9.32□□□□□ -0.92
CPS1-210ENST00000518043 A0A0G2JS52 829 aa9.32□□□□□ -0.92
CPS1-210ENST00000518043 ZBTB24O43167 697 aaPredicted RBP9.32□□□□□ -0.92
CPS1-210ENST00000518043 PPP2R1AP30153 589 aa9.32□□□□□ -0.92
CPS1-210ENST00000518043 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
CPS1-210ENST00000518043 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
CPS1-210ENST00000518043 BRD4O60885 1362 aaPredicted RBP9.32□□□□□ -0.92
CPS1-210ENST00000518043 USP31Q70CQ4 1352 aa9.32□□□□□ -0.92
CPS1-210ENST00000518043 ZC3H4Q9UPT8 1303 aaKnown RBP9.31□□□□□ -0.92
CPS1-210ENST00000518043 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
CPS1-210ENST00000518043 IRF5Q13568 498 aa9.31□□□□□ -0.92
CPS1-210ENST00000518043 NFAT5O94916 1531 aa9.31□□□□□ -0.92
CPS1-210ENST00000518043 ROBO1Q9Y6N7 1651 aa9.3□□□□□ -0.92
CPS1-210ENST00000518043 NBPF14Q5TI25 921 aa9.3□□□□□ -0.92
CPS1-210ENST00000518043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.3□□□□□ -0.92
CPS1-210ENST00000518043 WWC1Q8IX03 1113 aa9.3□□□□□ -0.92
CPS1-210ENST00000518043 FNBP4Q8N3X1 1017 aaPredicted RBP9.3□□□□□ -0.92
CPS1-210ENST00000518043 SLIT3O75094 1523 aa9.3□□□□□ -0.92
CPS1-210ENST00000518043 TTC21AQ8NDW8 1320 aa9.3□□□□□ -0.92
CPS1-210ENST00000518043 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
CPS1-210ENST00000518043 ABCA3Q99758 1704 aa9.29□□□□□ -0.92
CPS1-210ENST00000518043 ATF3P18847 181 aa9.29□□□□□ -0.92
CPS1-210ENST00000518043 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
CPS1-210ENST00000518043 BRINP3Q76B58 766 aa9.29□□□□□ -0.92
CPS1-210ENST00000518043 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
CPS1-210ENST00000518043 BAP1Q92560 729 aa9.29□□□□□ -0.92
CPS1-210ENST00000518043 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
CPS1-210ENST00000518043 AHDC1Q5TGY3 1603 aaPredicted RBP9.28□□□□□ -0.92
CPS1-210ENST00000518043 AATKQ6ZMQ8 1374 aa9.28□□□□□ -0.92
CPS1-210ENST00000518043 PHRF1Q9P1Y6 1649 aaKnown RBP9.28□□□□□ -0.92
CPS1-210ENST00000518043 TRAK2O60296 914 aa9.28□□□□□ -0.92
CPS1-210ENST00000518043 RPIAP49247 311 aa9.28□□□□□ -0.92
CPS1-210ENST00000518043 TRIM32Q13049 653 aa9.28□□□□□ -0.92
CPS1-210ENST00000518043 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
CPS1-210ENST00000518043 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
CPS1-210ENST00000518043 NGDNQ8NEJ9 315 aaKnown RBP9.28□□□□□ -0.92
CPS1-210ENST00000518043 EMID1Q96A84 441 aaPredicted RBP9.28□□□□□ -0.92
CPS1-210ENST00000518043 IQSEC2Q5JU85 1478 aa9.28□□□□□ -0.92
CPS1-210ENST00000518043 LTN1O94822 1766 aa9.27□□□□□ -0.92
CPS1-210ENST00000518043 LIAT1Q6ZQX7 453 aa9.27□□□□□ -0.93
CPS1-210ENST00000518043 MORC1Q86VD1 984 aa9.27□□□□□ -0.93
CPS1-210ENST00000518043 PNISRQ8TF01 805 aaKnown RBP9.27□□□□□ -0.93
CPS1-210ENST00000518043 DDX17Q92841 729 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms