RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 PCGF6Q9BYE7 350 aa15.36■□□□□ 0.05
CTNNA1-205ENST00000517904 SCN4AP35499 1836 aa15.36■□□□□ 0.05
CTNNA1-205ENST00000517904 GNAT3A8MTJ3 354 aa15.35■□□□□ 0.05
CTNNA1-205ENST00000517904 C7orf43Q8WVR3 580 aa15.35■□□□□ 0.05
CTNNA1-205ENST00000517904 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
CTNNA1-205ENST00000517904 L3MBTL3Q96JM7 780 aaPredicted RBP15.35■□□□□ 0.05
CTNNA1-205ENST00000517904 KIF7Q2M1P5 1343 aa15.35■□□□□ 0.05
CTNNA1-205ENST00000517904 NPHP1O15259 732 aa15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 PER1O15534 1290 aaPredicted RBP15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 KCNQ3O43525 872 aa15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 ST5P78524 1137 aa15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 CC2D1BQ5T0F9 858 aaKnown RBP15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 LDHDQ86WU2 507 aa15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 FMNL2Q96PY5 1086 aa15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 TAF1DQ9H5J8 278 aaPredicted RBP15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 CEMIPQ8WUJ3 1361 aa15.34■□□□□ 0.05
CTNNA1-205ENST00000517904 IQCA1LA6NCM1 817 aa15.33■□□□□ 0.04
CTNNA1-205ENST00000517904 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
CTNNA1-205ENST00000517904 PIP4K2AP48426 406 aaPredicted RBP15.33■□□□□ 0.04
CTNNA1-205ENST00000517904 SOGA3Q5TF21 947 aa15.33■□□□□ 0.04
CTNNA1-205ENST00000517904 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
CTNNA1-205ENST00000517904 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.04
CTNNA1-205ENST00000517904 ZNF541Q9H0D2 1346 aa15.33■□□□□ 0.04
CTNNA1-205ENST00000517904 ADAMTSL1Q8N6G6 1762 aa15.32■□□□□ 0.04
CTNNA1-205ENST00000517904 VEGFBP49765 207 aa15.32■□□□□ 0.04
CTNNA1-205ENST00000517904 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
CTNNA1-205ENST00000517904 PRDM10Q9NQV6 1147 aa15.32■□□□□ 0.04
CTNNA1-205ENST00000517904 PRAMEF22A3QJZ6 481 aa15.31■□□□□ 0.04
CTNNA1-205ENST00000517904 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
CTNNA1-205ENST00000517904 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
CTNNA1-205ENST00000517904 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
CTNNA1-205ENST00000517904 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
CTNNA1-205ENST00000517904 KLRG2A4D1S0 409 aaPredicted RBP15.3■□□□□ 0.04
CTNNA1-205ENST00000517904 TMEM88BA6NKF7 163 aa15.3■□□□□ 0.04
CTNNA1-205ENST00000517904 BTBD11A6QL63 1104 aa15.3■□□□□ 0.04
CTNNA1-205ENST00000517904 EAPPQ56P03 285 aaPredicted RBP15.3■□□□□ 0.04
CTNNA1-205ENST00000517904 NBPF5PQ86XG9 351 aaPredicted RBP15.3■□□□□ 0.04
CTNNA1-205ENST00000517904 PHACTR3Q96KR7 559 aa15.3■□□□□ 0.04
CTNNA1-205ENST00000517904 ZNF277Q9NRM2 450 aaPredicted RBP15.3■□□□□ 0.04
CTNNA1-205ENST00000517904 NPR1P16066 1061 aa15.29■□□□□ 0.04
CTNNA1-205ENST00000517904 CTCFP49711 727 aaPredicted RBP15.29■□□□□ 0.04
CTNNA1-205ENST00000517904 FKBP4Q02790 459 aaKnown RBP eCLIP15.29■□□□□ 0.04
CTNNA1-205ENST00000517904 CLEC4GQ6UXB4 293 aa15.29■□□□□ 0.04
CTNNA1-205ENST00000517904 WBP1LQ9NX94 342 aa15.29■□□□□ 0.04
CTNNA1-205ENST00000517904 HACL1Q9UJ83 578 aa15.28■□□□□ 0.04
CTNNA1-205ENST00000517904 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.04
CTNNA1-205ENST00000517904 EPHX2P34913 555 aa15.27■□□□□ 0.04
CTNNA1-205ENST00000517904 LBX1P52954 281 aa15.27■□□□□ 0.04
CTNNA1-205ENST00000517904 AIDAQ96BJ3 306 aa15.27■□□□□ 0.04
CTNNA1-205ENST00000517904 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 NBPF26B4DH59 902 aa15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 CNGB1Q14028 1251 aaPredicted RBP15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 MAP1SQ66K74 1059 aaPredicted RBP15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 NBPF10Q6P3W6 841 aaKnown RBP15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 NBPF15Q8N660 670 aa15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 ZNF652Q9Y2D9 606 aa15.26■□□□□ 0.03
CTNNA1-205ENST00000517904 FAM177BA6PVY3 158 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 FZD9O00144 591 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 TPTE2Q6XPS3 522 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 RTKN2Q8IZC4 609 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 COL4A5P29400 1685 aa15.25■□□□□ 0.03
CTNNA1-205ENST00000517904 NPC1L1Q9UHC9 1359 aa15.24■□□□□ 0.03
CTNNA1-205ENST00000517904 LTBP1Q14766 1721 aa15.24■□□□□ 0.03
CTNNA1-205ENST00000517904 SNRPA1P09661 255 aaKnown RBP15.24■□□□□ 0.03
CTNNA1-205ENST00000517904 HSPA8P11142 646 aaKnown RBP15.24■□□□□ 0.03
CTNNA1-205ENST00000517904 DEFB115Q30KQ5 88 aa15.24■□□□□ 0.03
CTNNA1-205ENST00000517904 PNMA8AQ86V59 439 aaPredicted RBP15.24■□□□□ 0.03
CTNNA1-205ENST00000517904 HLFQ16534 295 aa15.23■□□□□ 0.03
CTNNA1-205ENST00000517904 MCM10Q7L590 875 aa15.23■□□□□ 0.03
CTNNA1-205ENST00000517904 GPC2Q8N158 579 aa15.23■□□□□ 0.03
CTNNA1-205ENST00000517904 SYNE4Q8N205 404 aa15.23■□□□□ 0.03
CTNNA1-205ENST00000517904 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
CTNNA1-205ENST00000517904 RGL2O15211 777 aa15.22■□□□□ 0.03
CTNNA1-205ENST00000517904 ABCC12Q96J65 1359 aa15.22■□□□□ 0.03
CTNNA1-205ENST00000517904 ALDH1B1P30837 517 aa15.21■□□□□ 0.03
CTNNA1-205ENST00000517904 SLC51AQ86UW1 340 aa15.21■□□□□ 0.03
CTNNA1-205ENST00000517904 ABHD8Q96I13 439 aa15.21■□□□□ 0.03
CTNNA1-205ENST00000517904 PSMD1Q99460 953 aa15.21■□□□□ 0.03
CTNNA1-205ENST00000517904 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
CTNNA1-205ENST00000517904 THSD7BQ9C0I4 1608 aa15.21■□□□□ 0.02
CTNNA1-205ENST00000517904 FMR1Q06787 632 aaKnown RBP eCLIP15.2■□□□□ 0.02
CTNNA1-205ENST00000517904 DCTN1Q14203 1278 aa15.2■□□□□ 0.02
CTNNA1-205ENST00000517904 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
CTNNA1-205ENST00000517904 ABT1Q9ULW3 272 aaKnown RBP15.2■□□□□ 0.02
CTNNA1-205ENST00000517904 LAMB4A4D0S4 1761 aa15.19■□□□□ 0.02
CTNNA1-205ENST00000517904 MAP2K1Q02750 393 aaPredicted RBP15.19■□□□□ 0.02
CTNNA1-205ENST00000517904 NUTM1Q86Y26 1132 aa15.19■□□□□ 0.02
CTNNA1-205ENST00000517904 JDP2Q8WYK2 163 aa15.19■□□□□ 0.02
CTNNA1-205ENST00000517904 GJA3Q9Y6H8 435 aa15.19■□□□□ 0.02
CTNNA1-205ENST00000517904 NUP98P52948 1817 aa15.18■□□□□ 0.02
CTNNA1-205ENST00000517904 GTF2E1P29083 439 aaPredicted RBP15.18■□□□□ 0.02
CTNNA1-205ENST00000517904 SCNN1DP51172 638 aa15.18■□□□□ 0.02
CTNNA1-205ENST00000517904 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms