RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 MTHFSP49914 203 aa20.59■□□□□ 0.89
LRRCC1-203ENST00000517875 NME9Q86XW9 330 aa20.59■□□□□ 0.89
LRRCC1-203ENST00000517875 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
LRRCC1-203ENST00000517875 FHOD1Q9Y613 1164 aa20.59■□□□□ 0.89
LRRCC1-203ENST00000517875 EDC4Q6P2E9 1401 aaKnown RBP20.59■□□□□ 0.89
LRRCC1-203ENST00000517875 CHAMP1Q96JM3 812 aa20.59■□□□□ 0.89
LRRCC1-203ENST00000517875 XIRP1Q702N8 1843 aaKnown RBP20.58■□□□□ 0.89
LRRCC1-203ENST00000517875 ATP6V1AP38606 617 aa20.58■□□□□ 0.89
LRRCC1-203ENST00000517875 MAGEA9P43362 315 aa20.58■□□□□ 0.89
LRRCC1-203ENST00000517875 TPM4P67936 248 aa20.58■□□□□ 0.89
LRRCC1-203ENST00000517875 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
LRRCC1-203ENST00000517875 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
LRRCC1-203ENST00000517875 TNNQ9UQP3 1299 aa20.58■□□□□ 0.89
LRRCC1-203ENST00000517875 ITSN1Q15811 1721 aa20.58■□□□□ 0.88
LRRCC1-203ENST00000517875 FOXO3O43524 673 aa20.58■□□□□ 0.88
LRRCC1-203ENST00000517875 GPS2Q13227 327 aa20.58■□□□□ 0.88
LRRCC1-203ENST00000517875 HDAC1Q13547 482 aaPredicted RBP20.58■□□□□ 0.88
LRRCC1-203ENST00000517875 ZNF215Q9UL58 517 aaPredicted RBP20.58■□□□□ 0.88
LRRCC1-203ENST00000517875 TTC21BQ7Z4L5 1316 aa20.58■□□□□ 0.88
LRRCC1-203ENST00000517875 PPP1R12AO14974 1030 aaPredicted RBP20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 ELF2Q15723 593 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 E2F4Q16254 413 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 FBXO18Q8NFZ0 1043 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 C1orf167Q5SNV9 1468 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 USP6P35125 1406 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 RABEP1Q15276 862 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 LRCH2Q5VUJ6 765 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 GOLGA5Q8TBA6 731 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 ERO1AQ96HE7 468 aa20.57■□□□□ 0.88
LRRCC1-203ENST00000517875 PLA2G4AP47712 749 aa20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 RARSP54136 660 aaKnown RBP20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 PSME1Q06323 249 aa20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 FAM212AQ96EL1 285 aa20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 DCCP43146 1447 aa20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 HTATSF1O43719 755 aaKnown RBP20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 MCTP2Q6DN12 878 aa20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 SMARCE1Q969G3 411 aa20.56■□□□□ 0.88
LRRCC1-203ENST00000517875 AKAP12Q02952 1782 aa20.55■□□□□ 0.88
LRRCC1-203ENST00000517875 HCLS1P14317 486 aaPredicted RBP20.55■□□□□ 0.88
LRRCC1-203ENST00000517875 RNF20Q5VTR2 975 aa20.55■□□□□ 0.88
LRRCC1-203ENST00000517875 MST1RQ04912 1400 aa20.55■□□□□ 0.88
LRRCC1-203ENST00000517875 BMP2KLQ5H9B9 411 aa20.54■□□□□ 0.88
LRRCC1-203ENST00000517875 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.54■□□□□ 0.88
LRRCC1-203ENST00000517875 V9GYY5 206 aaPredicted RBP20.54■□□□□ 0.88
LRRCC1-203ENST00000517875 MAP2K2P36507 400 aa20.54■□□□□ 0.88
LRRCC1-203ENST00000517875 ST5P78524 1137 aa20.54■□□□□ 0.88
LRRCC1-203ENST00000517875 CFAP53Q96M91 514 aa20.54■□□□□ 0.88
LRRCC1-203ENST00000517875 PNMA6AP0CW24 399 aaPredicted RBP20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 H2AFXP16104 143 aaPredicted RBP20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 MVPQ14764 893 aaKnown RBP20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 MON2Q7Z3U7 1717 aa20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 SLAIN2Q9P270 581 aa20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 NBPF11Q86T75 865 aa20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 ZGPATQ8N5A5 531 aaKnown RBP20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 IQUBQ8NA54 791 aa20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 SPC24Q8NBT2 197 aa20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 ANKRD20A12PQ8NF67 263 aa20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 IFT57Q9NWB7 429 aa20.53■□□□□ 0.88
LRRCC1-203ENST00000517875 FBLN1P23142 703 aa20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 TRDNQ13061 729 aa20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 ANKRD26Q9UPS8 1709 aa20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 SSH2Q76I76 1423 aa20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 PLCB2Q00722 1185 aa20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 NBPF10Q6P3W6 841 aaKnown RBP20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 CEP89Q96ST8 783 aa20.52■□□□□ 0.88
LRRCC1-203ENST00000517875 CEP135Q66GS9 1140 aa20.51■□□□□ 0.87
LRRCC1-203ENST00000517875 ERBB3P21860 1342 aa20.51■□□□□ 0.87
LRRCC1-203ENST00000517875 POLR3GO15318 223 aaPredicted RBP20.51■□□□□ 0.87
LRRCC1-203ENST00000517875 AP5Z1O43299 807 aa20.51■□□□□ 0.87
LRRCC1-203ENST00000517875 DDX17Q92841 729 aaKnown RBP20.51■□□□□ 0.87
LRRCC1-203ENST00000517875 COG3Q96JB2 828 aa20.51■□□□□ 0.87
LRRCC1-203ENST00000517875 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.51■□□□□ 0.87
LRRCC1-203ENST00000517875 PTGS1P23219 599 aa20.5■□□□□ 0.87
LRRCC1-203ENST00000517875 CFAP44Q96MT7 982 aa20.5■□□□□ 0.87
LRRCC1-203ENST00000517875 CCDC196A0A1B0GTZ2 297 aa20.5■□□□□ 0.87
LRRCC1-203ENST00000517875 NUTM2GQ5VZR2 741 aa20.5■□□□□ 0.87
LRRCC1-203ENST00000517875 CALRP27797 417 aaKnown RBP20.49■□□□□ 0.87
LRRCC1-203ENST00000517875 TBC1D9Q6ZT07 1266 aa20.49■□□□□ 0.87
LRRCC1-203ENST00000517875 TTC21AQ8NDW8 1320 aa20.49■□□□□ 0.87
LRRCC1-203ENST00000517875 PPM1EQ8WY54 764 aa20.49■□□□□ 0.87
LRRCC1-203ENST00000517875 LTBP4Q8N2S1 1624 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 KIF20BQ96Q89 1820 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 RPAINQ86UA6 219 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 ABTB2Q8N961 1025 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 SSR1P43307 286 aaKnown RBP20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 CCDC183Q5T5S1 534 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 KRT28Q7Z3Y7 464 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 EXOC6BQ9Y2D4 811 aa20.48■□□□□ 0.87
LRRCC1-203ENST00000517875 KIF3CO14782 793 aa20.47■□□□□ 0.87
LRRCC1-203ENST00000517875 PPP2R5AQ15172 486 aa20.47■□□□□ 0.87
LRRCC1-203ENST00000517875 TPD52L1Q16890 204 aaPredicted RBP20.47■□□□□ 0.87
LRRCC1-203ENST00000517875 C11orf91Q3C1V1 193 aa20.47■□□□□ 0.87
LRRCC1-203ENST00000517875 MMS22LQ6ZRQ5 1243 aa20.47■□□□□ 0.87
LRRCC1-203ENST00000517875 JMYQ8N9B5 988 aa20.47■□□□□ 0.87
LRRCC1-203ENST00000517875 ZNF592Q92610 1267 aa20.47■□□□□ 0.87
LRRCC1-203ENST00000517875 CLCN6P51797 869 aa20.46■□□□□ 0.87
LRRCC1-203ENST00000517875 NLRP6P59044 892 aa20.46■□□□□ 0.87
LRRCC1-203ENST00000517875 NUCB1Q02818 461 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms