RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
PCM1-203ENST00000517545 AKAP12Q02952 1782 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 ME3Q16798 604 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 CKAP2LQ8IYA6 745 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 GTPBP4Q9BZE4 634 aaKnown RBP14.76□□□□□ -0.05
PCM1-203ENST00000517545 NRBP1Q9UHY1 535 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 MRVI1Q9Y6F6 885 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 POLA2Q14181 598 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 FAM200AQ8TCP9 573 aa14.76□□□□□ -0.05
PCM1-203ENST00000517545 GOLGA6L6A8MZA4 724 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 RAB11FIP3O75154 756 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 NBPF7P0C2Y1 421 aaPredicted RBP14.75□□□□□ -0.05
PCM1-203ENST00000517545 CCDC186Q7Z3E2 898 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 TYRO3Q06418 890 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 C16orf45Q96MC5 204 aaPredicted RBP14.75□□□□□ -0.05
PCM1-203ENST00000517545 ITSN1Q15811 1721 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 TPM3P06753 285 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 CDC37L1Q7L3B6 337 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
PCM1-203ENST00000517545 NRXN3Q9Y4C0 1643 aa14.74□□□□□ -0.05
PCM1-203ENST00000517545 NCBP1Q09161 790 aaKnown RBP14.74□□□□□ -0.05
PCM1-203ENST00000517545 NAA30Q147X3 362 aaPredicted RBP14.74□□□□□ -0.05
PCM1-203ENST00000517545 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
PCM1-203ENST00000517545 BCL11BQ9C0K0 894 aaPredicted RBP14.74□□□□□ -0.05
PCM1-203ENST00000517545 NUP62CLQ9H1M0 184 aa14.74□□□□□ -0.05
PCM1-203ENST00000517545 CEP170BQ9Y4F5 1589 aaPredicted RBP14.74□□□□□ -0.05
PCM1-203ENST00000517545 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 TPCN1Q9ULQ1 816 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 ANO6Q4KMQ2 910 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 LARP1BQ659C4 914 aaKnown RBP14.73□□□□□ -0.05
PCM1-203ENST00000517545 IL17REQ8NFR9 667 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 CBX8Q9HC52 389 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 ZSWIM6Q9HCJ5 1215 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 PODXL2Q9NZ53 605 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 ROBO2Q9HCK4 1378 aa14.73□□□□□ -0.05
PCM1-203ENST00000517545 HDGFL1Q5TGJ6 251 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 DRC7Q8IY82 874 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 DACT1Q9NYF0 836 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 FAM208AQ9UK61 1670 aaKnown RBP14.72□□□□□ -0.05
PCM1-203ENST00000517545 TCEANC2Q96MN5 208 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 USP31Q70CQ4 1352 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 KRT85P78386 507 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 ESF1Q9H501 851 aaKnown RBP14.72□□□□□ -0.05
PCM1-203ENST00000517545 SH2B1Q9NRF2 756 aaPredicted RBP14.72□□□□□ -0.05
PCM1-203ENST00000517545 TFIP11Q9UBB9 837 aaKnown RBP14.72□□□□□ -0.05
PCM1-203ENST00000517545 KDRP35968 1356 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 USP6P35125 1406 aa14.72□□□□□ -0.05
PCM1-203ENST00000517545 GNAT3A8MTJ3 354 aa14.71□□□□□ -0.05
PCM1-203ENST00000517545 SPATA31D1Q6ZQQ2 1576 aa14.71□□□□□ -0.05
PCM1-203ENST00000517545 A0A0U1RQG5 324 aaPredicted RBP14.71□□□□□ -0.05
PCM1-203ENST00000517545 EIF2S2P20042 333 aaKnown RBP14.71□□□□□ -0.05
PCM1-203ENST00000517545 AMPHP49418 695 aa14.71□□□□□ -0.05
PCM1-203ENST00000517545 ZSCAN31Q96LW9 406 aaPredicted RBP14.71□□□□□ -0.05
PCM1-203ENST00000517545 IGSF1Q8N6C5 1336 aa14.7□□□□□ -0.06
PCM1-203ENST00000517545 OS9Q13438 667 aaPredicted RBP14.7□□□□□ -0.06
PCM1-203ENST00000517545 TRIM5Q9C035 493 aa14.7□□□□□ -0.06
PCM1-203ENST00000517545 TNMDQ9H2S6 317 aa14.7□□□□□ -0.06
PCM1-203ENST00000517545 KIF20AO95235 890 aa14.7□□□□□ -0.06
PCM1-203ENST00000517545 MAP3K5Q99683 1374 aa14.7□□□□□ -0.06
PCM1-203ENST00000517545 GLRX3O76003 335 aaKnown RBP14.7□□□□□ -0.06
PCM1-203ENST00000517545 ZSCAN25Q6NSZ9 544 aa14.7□□□□□ -0.06
PCM1-203ENST00000517545 TNNT1P13805 278 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 NECTIN1Q15223 517 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 FLT4P35916 1363 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 PLEKHG3A1L390 1219 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 ZNF75DP51815 510 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
PCM1-203ENST00000517545 ANXA1P04083 346 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 TM6SF1Q9BZW5 370 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
PCM1-203ENST00000517545 TAF6LQ9Y6J9 622 aa14.69□□□□□ -0.06
PCM1-203ENST00000517545 TECPR2O15040 1411 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 RUFY2Q8WXA3 655 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 SIRT1Q96EB6 747 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 FAM227BQ96M60 508 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 PXDNLA1KZ92 1463 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 CCDC144BQ3MJ40 725 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 PLA2G4DQ86XP0 818 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 CCDC144CPQ8IYA2 1237 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 CACTINQ8WUQ7 758 aaKnown RBP14.68□□□□□ -0.06
PCM1-203ENST00000517545 DNAJC25Q9H1X3 360 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 CTNNA3Q9UI47 895 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 TTC21AQ8NDW8 1320 aa14.68□□□□□ -0.06
PCM1-203ENST00000517545 PI4KAP2A4QPH2 592 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 SMTNL1A8MU46 457 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 NR1I2O75469 434 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 PI4KAP1Q8N8J0 262 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 KCNB2Q92953 911 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 PA2G4Q9UQ80 394 aaKnown RBP14.67□□□□□ -0.06
PCM1-203ENST00000517545 CCDC171Q6TFL3 1326 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 KCNJ4P48050 445 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
PCM1-203ENST00000517545 SPATA32Q96LK8 384 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 ELP1O95163 1332 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
PCM1-203ENST00000517545 USP42Q9H9J4 1324 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms