RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 CCDC87Q9NVE4 849 aa19.61■□□□□ 0.73
TRPS1-206ENST00000517323 IGHDP01880 384 aa19.61■□□□□ 0.73
TRPS1-206ENST00000517323 PROM2Q8N271 834 aa19.61■□□□□ 0.73
TRPS1-206ENST00000517323 GOLGB1Q14789 3259 aaKnown RBP19.61■□□□□ 0.73
TRPS1-206ENST00000517323 IGKV5-2P06315 115 aa19.6■□□□□ 0.73
TRPS1-206ENST00000517323 N4BP2Q86UW6 1770 aaPredicted RBP19.6■□□□□ 0.73
TRPS1-206ENST00000517323 APBA3O96018 575 aa19.6■□□□□ 0.73
TRPS1-206ENST00000517323 HLFQ16534 295 aa19.6■□□□□ 0.73
TRPS1-206ENST00000517323 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
TRPS1-206ENST00000517323 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
TRPS1-206ENST00000517323 AFDNP55196 1824 aaKnown RBP19.6■□□□□ 0.73
TRPS1-206ENST00000517323 NBPF7P0C2Y1 421 aaPredicted RBP19.59■□□□□ 0.73
TRPS1-206ENST00000517323 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
TRPS1-206ENST00000517323 SRCIN1Q9C0H9 1055 aa19.59■□□□□ 0.73
TRPS1-206ENST00000517323 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
TRPS1-206ENST00000517323 TNS1Q9HBL0 1735 aaKnown RBP19.58■□□□□ 0.73
TRPS1-206ENST00000517323 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.72
TRPS1-206ENST00000517323 CCT4P50991 539 aaKnown RBP19.58■□□□□ 0.72
TRPS1-206ENST00000517323 USP44Q9H0E7 712 aa19.58■□□□□ 0.72
TRPS1-206ENST00000517323 CICQ96RK0 1608 aaPredicted RBP19.57■□□□□ 0.72
TRPS1-206ENST00000517323 PLBD2Q8NHP8 589 aa19.57■□□□□ 0.72
TRPS1-206ENST00000517323 RREB1Q92766 1687 aa19.56■□□□□ 0.72
TRPS1-206ENST00000517323 GNPATO15228 680 aa19.56■□□□□ 0.72
TRPS1-206ENST00000517323 PHF14O94880 888 aa19.56■□□□□ 0.72
TRPS1-206ENST00000517323 EIF5P55010 431 aaKnown RBP19.56■□□□□ 0.72
TRPS1-206ENST00000517323 METTL22Q9BUU2 404 aaPredicted RBP19.56■□□□□ 0.72
TRPS1-206ENST00000517323 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
TRPS1-206ENST00000517323 C4BP0C0L5 1744 aa19.55■□□□□ 0.72
TRPS1-206ENST00000517323 ZNF831Q5JPB2 1677 aa19.55■□□□□ 0.72
TRPS1-206ENST00000517323 NUP98P52948 1817 aa19.55■□□□□ 0.72
TRPS1-206ENST00000517323 GPTP24298 496 aa19.55■□□□□ 0.72
TRPS1-206ENST00000517323 TXNRD1Q16881 649 aa19.55■□□□□ 0.72
TRPS1-206ENST00000517323 DZIP3Q86Y13 1208 aaKnown RBP19.55■□□□□ 0.72
TRPS1-206ENST00000517323 SIRT2Q8IXJ6 389 aa19.55■□□□□ 0.72
TRPS1-206ENST00000517323 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
TRPS1-206ENST00000517323 NEURL1BA8MQ27 555 aa19.54■□□□□ 0.72
TRPS1-206ENST00000517323 KIF6Q6ZMV9 814 aa19.53■□□□□ 0.72
TRPS1-206ENST00000517323 LRRFIP2Q9Y608 721 aaKnown RBP19.53■□□□□ 0.72
TRPS1-206ENST00000517323 COL15A1P39059 1388 aa19.53■□□□□ 0.72
TRPS1-206ENST00000517323 LINS1Q8NG48 757 aa19.53■□□□□ 0.72
TRPS1-206ENST00000517323 SRP68Q9UHB9 627 aaKnown RBP19.53■□□□□ 0.72
TRPS1-206ENST00000517323 MAP3K15Q6ZN16 1313 aa19.52■□□□□ 0.72
TRPS1-206ENST00000517323 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
TRPS1-206ENST00000517323 EN1Q05925 392 aaPredicted RBP19.52■□□□□ 0.72
TRPS1-206ENST00000517323 BCL11AQ9H165 835 aa19.52■□□□□ 0.72
TRPS1-206ENST00000517323 SRCAPQ6ZRS2 3230 aa19.51■□□□□ 0.71
TRPS1-206ENST00000517323 FAM177BA6PVY3 158 aa19.51■□□□□ 0.71
TRPS1-206ENST00000517323 NEXNQ0ZGT2 675 aa19.51■□□□□ 0.71
TRPS1-206ENST00000517323 DEFB132Q7Z7B7 95 aa19.51■□□□□ 0.71
TRPS1-206ENST00000517323 SYNE4Q8N205 404 aa19.51■□□□□ 0.71
TRPS1-206ENST00000517323 C9orf78Q9NZ63 289 aaPredicted RBP19.51■□□□□ 0.71
TRPS1-206ENST00000517323 GCKRQ14397 625 aa19.5■□□□□ 0.71
TRPS1-206ENST00000517323 NPM2Q86SE8 214 aaKnown RBP19.5■□□□□ 0.71
TRPS1-206ENST00000517323 KDM2BQ8NHM5 1336 aa19.5■□□□□ 0.71
TRPS1-206ENST00000517323 CNTNAP4Q9C0A0 1308 aa19.5■□□□□ 0.71
TRPS1-206ENST00000517323 UBTFL1P0CB47 393 aaPredicted RBP19.5■□□□□ 0.71
TRPS1-206ENST00000517323 EZH2Q15910 746 aaKnown RBP19.5■□□□□ 0.71
TRPS1-206ENST00000517323 UBE3BQ7Z3V4 1068 aa19.49■□□□□ 0.71
TRPS1-206ENST00000517323 CAMTA2O94983 1202 aa19.49■□□□□ 0.71
TRPS1-206ENST00000517323 ZNF827Q17R98 1081 aa19.49■□□□□ 0.71
TRPS1-206ENST00000517323 AK7Q96M32 723 aa19.49■□□□□ 0.71
TRPS1-206ENST00000517323 C4AP0C0L4 1744 aa19.48■□□□□ 0.71
TRPS1-206ENST00000517323 UBR3Q6ZT12 1888 aa19.48■□□□□ 0.71
TRPS1-206ENST00000517323 GRM8O00222 908 aa19.48■□□□□ 0.71
TRPS1-206ENST00000517323 CEP85Q6P2H3 762 aa19.48■□□□□ 0.71
TRPS1-206ENST00000517323 GIGYF2Q6Y7W6 1299 aaKnown RBP19.48■□□□□ 0.71
TRPS1-206ENST00000517323 KAZALD1Q96I82 304 aa19.48■□□□□ 0.71
TRPS1-206ENST00000517323 A0A087WZG4 1122 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 PNMA6EA0A0J9YXQ4 647 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 TCIRG1Q13488 830 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
TRPS1-206ENST00000517323 SUCLG2Q96I99 432 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 UBN2Q6ZU65 1347 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 ALDH1L1O75891 902 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 GNAI2P04899 355 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 BICDL1Q6ZP65 573 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 ANKRD36CQ5JPF3 1778 aa19.47■□□□□ 0.71
TRPS1-206ENST00000517323 PLSCR1O15162 318 aa19.46■□□□□ 0.71
TRPS1-206ENST00000517323 RPS6KA4O75676 772 aa19.46■□□□□ 0.71
TRPS1-206ENST00000517323 USPL1Q5W0Q7 1092 aa19.46■□□□□ 0.71
TRPS1-206ENST00000517323 RTCBQ9Y3I0 505 aaKnown RBP19.46■□□□□ 0.71
TRPS1-206ENST00000517323 FAM89AQ96GI7 184 aa19.46■□□□□ 0.71
TRPS1-206ENST00000517323 TUBGCP6Q96RT7 1819 aa19.45■□□□□ 0.7
TRPS1-206ENST00000517323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.45■□□□□ 0.7
TRPS1-206ENST00000517323 APBB1O00213 710 aa19.45■□□□□ 0.7
TRPS1-206ENST00000517323 GNAI3P08754 354 aa19.45■□□□□ 0.7
TRPS1-206ENST00000517323 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
TRPS1-206ENST00000517323 BCL2L12Q9HB09 334 aa19.45■□□□□ 0.7
TRPS1-206ENST00000517323 BCORQ6W2J9 1755 aa19.45■□□□□ 0.7
TRPS1-206ENST00000517323 SLC27A3Q5K4L6 730 aa19.44■□□□□ 0.7
TRPS1-206ENST00000517323 RC3H1Q5TC82 1133 aaKnown RBP19.44■□□□□ 0.7
TRPS1-206ENST00000517323 CWC25Q9NXE8 425 aaPredicted RBP19.44■□□□□ 0.7
TRPS1-206ENST00000517323 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
TRPS1-206ENST00000517323 NLRP10Q86W26 655 aa19.43■□□□□ 0.7
TRPS1-206ENST00000517323 ANKRD44Q8N8A2 993 aa19.43■□□□□ 0.7
TRPS1-206ENST00000517323 CCDC85AQ96PX6 553 aaPredicted RBP19.43■□□□□ 0.7
TRPS1-206ENST00000517323 ANO8Q9HCE9 1232 aaPredicted RBP19.43■□□□□ 0.7
TRPS1-206ENST00000517323 CASP7P55210 303 aa19.42■□□□□ 0.7
TRPS1-206ENST00000517323 CCDC24Q8N4L8 307 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms