RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ATXN7O15265 892 aaPredicted RBP10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 PRMT3O60678 531 aa10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 MX2P20592 715 aa10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 LYPD4Q6UWN0 246 aa10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 STAG2Q8N3U4 1231 aa10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 ZNF280CQ8ND82 737 aa10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 RHPN1Q8TCX5 695 aa10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 PCDHGC4Q9Y5F7 938 aa10.6□□□□□ -0.71
SCARNA1-201ENST00000517138 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
SCARNA1-201ENST00000517138 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
SCARNA1-201ENST00000517138 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.71
SCARNA1-201ENST00000517138 KHNYNO15037 678 aaKnown RBP10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 MAPTP10636 758 aaKnown RBP10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 FGFR3P22607 806 aa10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 TNP2Q05952 138 aa10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 GRIN2CQ14957 1233 aa10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 ARID3AQ99856 593 aa10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 ATXN7L1Q9ULK2 861 aaPredicted RBP10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 GJA3Q9Y6H8 435 aa10.58□□□□□ -0.72
SCARNA1-201ENST00000517138 FKBP5Q13451 457 aaPredicted RBP10.57□□□□□ -0.72
SCARNA1-201ENST00000517138 OCLNQ16625 522 aa10.57□□□□□ -0.72
SCARNA1-201ENST00000517138 C1orf53Q5VUE5 145 aa10.57□□□□□ -0.72
SCARNA1-201ENST00000517138 FIGNL1Q6PIW4 674 aa10.57□□□□□ -0.72
SCARNA1-201ENST00000517138 ACDQ96AP0 544 aa10.57□□□□□ -0.72
SCARNA1-201ENST00000517138 CD33P20138 364 aa10.56□□□□□ -0.72
SCARNA1-201ENST00000517138 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
SCARNA1-201ENST00000517138 PHF24Q9UPV7 400 aa10.56□□□□□ -0.72
SCARNA1-201ENST00000517138 CARNS1A5YM72 827 aa10.55□□□□□ -0.72
SCARNA1-201ENST00000517138 CELA2BP08218 269 aaPredicted RBP10.55□□□□□ -0.72
SCARNA1-201ENST00000517138 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
SCARNA1-201ENST00000517138 CAPN12Q6ZSI9 719 aa10.55□□□□□ -0.72
SCARNA1-201ENST00000517138 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
SCARNA1-201ENST00000517138 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
SCARNA1-201ENST00000517138 EFSO43281 561 aa10.54□□□□□ -0.72
SCARNA1-201ENST00000517138 FAM157BP0CG42 384 aa10.54□□□□□ -0.72
SCARNA1-201ENST00000517138 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
SCARNA1-201ENST00000517138 QTRT2Q9H974 415 aaKnown RBP10.54□□□□□ -0.72
SCARNA1-201ENST00000517138 BCS1LQ9Y276 419 aa10.54□□□□□ -0.72
SCARNA1-201ENST00000517138 SFSWAPQ12872 951 aaKnown RBP10.53□□□□□ -0.72
SCARNA1-201ENST00000517138 C1orf229Q6ZS94 237 aaPredicted RBP10.53□□□□□ -0.72
SCARNA1-201ENST00000517138 KLK14Q9P0G3 267 aa10.53□□□□□ -0.72
SCARNA1-201ENST00000517138 FOXO3O43524 673 aa10.52□□□□□ -0.73
SCARNA1-201ENST00000517138 ARHGEF15O94989 841 aa10.52□□□□□ -0.73
SCARNA1-201ENST00000517138 BMP4P12644 408 aa10.52□□□□□ -0.73
SCARNA1-201ENST00000517138 NEUROD4Q9HD90 331 aa10.52□□□□□ -0.73
SCARNA1-201ENST00000517138 RTN1Q16799 776 aa10.51□□□□□ -0.73
SCARNA1-201ENST00000517138 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
SCARNA1-201ENST00000517138 LRFN2Q9ULH4 789 aa10.51□□□□□ -0.73
SCARNA1-201ENST00000517138 GPC6Q9Y625 555 aaPredicted RBP10.51□□□□□ -0.73
SCARNA1-201ENST00000517138 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
SCARNA1-201ENST00000517138 OXCT2Q9BYC2 517 aaPredicted RBP10.5□□□□□ -0.73
SCARNA1-201ENST00000517138 CXXC1Q9P0U4 656 aaPredicted RBP10.5□□□□□ -0.73
SCARNA1-201ENST00000517138 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 SCNN1AP37088 669 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 MAP2K3P46734 347 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 TYRO3Q06418 890 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 CLP1Q92989 425 aaKnown RBP10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 SAP130Q9H0E3 1048 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 MARK1Q9P0L2 795 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 KLF15Q9UIH9 416 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 ADAMTS8Q9UP79 889 aa10.49□□□□□ -0.73
SCARNA1-201ENST00000517138 DGKZQ13574 1117 aa10.48□□□□□ -0.73
SCARNA1-201ENST00000517138 BRD7Q9NPI1 651 aa10.48□□□□□ -0.73
SCARNA1-201ENST00000517138 NSFL1CQ9UNZ2 370 aaKnown RBP10.48□□□□□ -0.73
SCARNA1-201ENST00000517138 BCRP11274 1271 aa10.47□□□□□ -0.73
SCARNA1-201ENST00000517138 BTLAQ7Z6A9 289 aa10.47□□□□□ -0.73
SCARNA1-201ENST00000517138 VTI1AQ96AJ9 217 aa10.47□□□□□ -0.73
SCARNA1-201ENST00000517138 SLC30A3Q99726 388 aa10.47□□□□□ -0.73
SCARNA1-201ENST00000517138 DMGDHQ9UI17 866 aaKnown RBP10.47□□□□□ -0.73
SCARNA1-201ENST00000517138 GGA1Q9UJY5 639 aa10.47□□□□□ -0.73
SCARNA1-201ENST00000517138 SHISA8B8ZZ34 492 aa10.46□□□□□ -0.73
SCARNA1-201ENST00000517138 PPP1R15AO75807 674 aaPredicted RBP10.46□□□□□ -0.73
SCARNA1-201ENST00000517138 GRNP28799 593 aaKnown RBP10.46□□□□□ -0.73
SCARNA1-201ENST00000517138 FAM26DQ5JW98 314 aa10.46□□□□□ -0.73
SCARNA1-201ENST00000517138 COX20Q5RI15 118 aa10.46□□□□□ -0.73
SCARNA1-201ENST00000517138 FAM182BQ5T319 152 aa10.46□□□□□ -0.73
SCARNA1-201ENST00000517138 ANKIB1Q9P2G1 1089 aa10.46□□□□□ -0.73
SCARNA1-201ENST00000517138 NEURL1BA8MQ27 555 aa10.45□□□□□ -0.74
SCARNA1-201ENST00000517138 ATP2B4P23634 1241 aa10.45□□□□□ -0.74
SCARNA1-201ENST00000517138 PCBP4P57723 403 aaKnown RBP10.45□□□□□ -0.74
SCARNA1-201ENST00000517138 NAA30Q147X3 362 aaPredicted RBP10.45□□□□□ -0.74
SCARNA1-201ENST00000517138 RAB44Q7Z6P3 723 aaPredicted RBP10.45□□□□□ -0.74
SCARNA1-201ENST00000517138 MYO19Q96H55 970 aa10.45□□□□□ -0.74
SCARNA1-201ENST00000517138 FAM181BA6NEQ2 426 aa10.44□□□□□ -0.74
SCARNA1-201ENST00000517138 TGFBR3LH3BV60 316 aa10.44□□□□□ -0.74
SCARNA1-201ENST00000517138 OIP5O43482 229 aa10.44□□□□□ -0.74
SCARNA1-201ENST00000517138 DNMT3AQ9Y6K1 912 aaPredicted RBP10.44□□□□□ -0.74
SCARNA1-201ENST00000517138 MAP3K10Q02779 954 aa10.43□□□□□ -0.74
SCARNA1-201ENST00000517138 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
SCARNA1-201ENST00000517138 GALNT6Q8NCL4 622 aa10.43□□□□□ -0.74
SCARNA1-201ENST00000517138 SEPT3Q9UH03 358 aa10.43□□□□□ -0.74
SCARNA1-201ENST00000517138 ARAFP10398 606 aa10.42□□□□□ -0.74
SCARNA1-201ENST00000517138 C11orf91Q3C1V1 193 aa10.42□□□□□ -0.74
SCARNA1-201ENST00000517138 FCHSD1Q86WN1 690 aa10.42□□□□□ -0.74
SCARNA1-201ENST00000517138 USP20Q9Y2K6 914 aa10.42□□□□□ -0.74
SCARNA1-201ENST00000517138 IER5Q5VY09 327 aa10.41□□□□□ -0.74
SCARNA1-201ENST00000517138 EDARADDQ8WWZ3 215 aa10.41□□□□□ -0.74
SCARNA1-201ENST00000517138 PRR12Q9ULL5 1215 aa10.41□□□□□ -0.74
SCARNA1-201ENST00000517138 KCNH4Q9UQ05 1017 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms