RNA–Protein interactions for RNA: ENST00000515807.5

PAPD4-217, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-217ENST00000515807 TSPYL4Q9UJ04 414 aa16.2■□□□□ 0.18
PAPD4-217ENST00000515807 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
PAPD4-217ENST00000515807 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
PAPD4-217ENST00000515807 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
PAPD4-217ENST00000515807 AFDNP55196 1824 aaKnown RBP16.19■□□□□ 0.18
PAPD4-217ENST00000515807 HSPA6P17066 643 aa16.18■□□□□ 0.18
PAPD4-217ENST00000515807 MIS18AQ9NYP9 233 aa16.18■□□□□ 0.18
PAPD4-217ENST00000515807 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 KIF3CO14782 793 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 SRGNP10124 158 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 NPR1P16066 1061 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 DPY19L2Q6NUT2 758 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
PAPD4-217ENST00000515807 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
PAPD4-217ENST00000515807 DLEC1Q9Y238 1755 aa16.16■□□□□ 0.18
PAPD4-217ENST00000515807 ALDH1B1P30837 517 aa16.16■□□□□ 0.18
PAPD4-217ENST00000515807 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
PAPD4-217ENST00000515807 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
PAPD4-217ENST00000515807 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
PAPD4-217ENST00000515807 KLRG2A4D1S0 409 aaPredicted RBP16.15■□□□□ 0.18
PAPD4-217ENST00000515807 GRIPAP1Q4V328 841 aa16.15■□□□□ 0.18
PAPD4-217ENST00000515807 RBM46Q8TBY0 533 aaKnown RBP16.15■□□□□ 0.18
PAPD4-217ENST00000515807 PRKRIP1Q9H875 184 aaPredicted RBP16.15■□□□□ 0.18
PAPD4-217ENST00000515807 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
PAPD4-217ENST00000515807 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
PAPD4-217ENST00000515807 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
PAPD4-217ENST00000515807 PIP4K2AP48426 406 aaPredicted RBP16.14■□□□□ 0.17
PAPD4-217ENST00000515807 APLP1P51693 650 aa16.14■□□□□ 0.17
PAPD4-217ENST00000515807 FSTL1Q12841 308 aa16.14■□□□□ 0.17
PAPD4-217ENST00000515807 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
PAPD4-217ENST00000515807 TAOK3Q9H2K8 898 aa16.14■□□□□ 0.17
PAPD4-217ENST00000515807 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 C21orf2O43822 256 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 HOXB7P09629 217 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 HSP90AB3PQ58FF7 597 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 PRPF40BQ6NWY9 871 aaKnown RBP16.13■□□□□ 0.17
PAPD4-217ENST00000515807 PPP1R42Q7Z4L9 355 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 THUMPD2Q9BTF0 503 aaKnown RBP16.13■□□□□ 0.17
PAPD4-217ENST00000515807 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
PAPD4-217ENST00000515807 MYL6BP14649 208 aa16.12■□□□□ 0.17
PAPD4-217ENST00000515807 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
PAPD4-217ENST00000515807 CCDC93Q567U6 631 aa16.12■□□□□ 0.17
PAPD4-217ENST00000515807 CC2D2BQ6DHV5 1058 aa16.12■□□□□ 0.17
PAPD4-217ENST00000515807 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
PAPD4-217ENST00000515807 RTKN2Q8IZC4 609 aa16.12■□□□□ 0.17
PAPD4-217ENST00000515807 NFKBIEO00221 500 aa16.11■□□□□ 0.17
PAPD4-217ENST00000515807 CHL1O00533 1208 aa16.11■□□□□ 0.17
PAPD4-217ENST00000515807 RASSF7Q02833 373 aa16.11■□□□□ 0.17
PAPD4-217ENST00000515807 NGEFQ8N5V2 710 aa16.11■□□□□ 0.17
PAPD4-217ENST00000515807 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
PAPD4-217ENST00000515807 NMRK2Q9NPI5 230 aa16.11■□□□□ 0.17
PAPD4-217ENST00000515807 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
PAPD4-217ENST00000515807 NEUROD2Q15784 382 aa16.1■□□□□ 0.17
PAPD4-217ENST00000515807 HLFQ16534 295 aa16.1■□□□□ 0.17
PAPD4-217ENST00000515807 ERFEQ4G0M1 354 aa16.1■□□□□ 0.17
PAPD4-217ENST00000515807 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
PAPD4-217ENST00000515807 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
PAPD4-217ENST00000515807 CRY2Q49AN0 593 aa16.09■□□□□ 0.17
PAPD4-217ENST00000515807 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
PAPD4-217ENST00000515807 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
PAPD4-217ENST00000515807 RPGRQ92834 1020 aaKnown RBP16.09■□□□□ 0.17
PAPD4-217ENST00000515807 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
PAPD4-217ENST00000515807 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
PAPD4-217ENST00000515807 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
PAPD4-217ENST00000515807 ZBTB3Q9H5J0 574 aa16.08■□□□□ 0.16
PAPD4-217ENST00000515807 RRAGCQ9HB90 399 aa16.08■□□□□ 0.16
PAPD4-217ENST00000515807 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
PAPD4-217ENST00000515807 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.16
PAPD4-217ENST00000515807 ANKRD31Q8N7Z5 1873 aa16.08■□□□□ 0.16
PAPD4-217ENST00000515807 TTLL7Q6ZT98 887 aa16.07■□□□□ 0.16
PAPD4-217ENST00000515807 SBF1O95248 1867 aa16.06■□□□□ 0.16
PAPD4-217ENST00000515807 IQCA1LA6NCM1 817 aa16.06■□□□□ 0.16
PAPD4-217ENST00000515807 FAM177BA6PVY3 158 aa16.06■□□□□ 0.16
PAPD4-217ENST00000515807 HOXA10P31260 410 aaPredicted RBP16.06■□□□□ 0.16
PAPD4-217ENST00000515807 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
PAPD4-217ENST00000515807 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
PAPD4-217ENST00000515807 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
PAPD4-217ENST00000515807 NLRP3Q96P20 1036 aa16.06■□□□□ 0.16
PAPD4-217ENST00000515807 UTP14AQ9BVJ6 771 aaKnown RBP16.06■□□□□ 0.16
PAPD4-217ENST00000515807 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
PAPD4-217ENST00000515807 DBF4Q9UBU7 674 aaPredicted RBP16.06■□□□□ 0.16
PAPD4-217ENST00000515807 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
PAPD4-217ENST00000515807 LAS1LQ9Y4W2 734 aaKnown RBP16.06■□□□□ 0.16
PAPD4-217ENST00000515807 GNAI1P63096 354 aa16.05■□□□□ 0.16
PAPD4-217ENST00000515807 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
PAPD4-217ENST00000515807 GPTP24298 496 aa16.04■□□□□ 0.16
PAPD4-217ENST00000515807 PDIA6Q15084 440 aa16.04■□□□□ 0.16
PAPD4-217ENST00000515807 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
PAPD4-217ENST00000515807 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
PAPD4-217ENST00000515807 PSMD1Q99460 953 aa16.04■□□□□ 0.16
PAPD4-217ENST00000515807 IFT57Q9NWB7 429 aa16.04■□□□□ 0.16
PAPD4-217ENST00000515807 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
PAPD4-217ENST00000515807 ARFGEF2Q9Y6D5 1785 aa16.03■□□□□ 0.16
PAPD4-217ENST00000515807 COL11A2P13942 1736 aaPredicted RBP16.03■□□□□ 0.16
PAPD4-217ENST00000515807 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms