RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 PRRT3Q5FWE3 981 aa11.39□□□□□ -0.59
CENPE-207ENST00000515478 Q8N3U1 123 aa11.39□□□□□ -0.59
CENPE-207ENST00000515478 RHPN1Q8TCX5 695 aa11.39□□□□□ -0.59
CENPE-207ENST00000515478 ALG2Q9H553 416 aa11.39□□□□□ -0.59
CENPE-207ENST00000515478 SERTM1A2A2V5 107 aa11.38□□□□□ -0.59
CENPE-207ENST00000515478 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
CENPE-207ENST00000515478 TRIM50Q86XT4 487 aa11.38□□□□□ -0.59
CENPE-207ENST00000515478 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
CENPE-207ENST00000515478 SEMA6BQ9H3T3 888 aa11.38□□□□□ -0.59
CENPE-207ENST00000515478 RAD21O60216 631 aa11.37□□□□□ -0.59
CENPE-207ENST00000515478 APBA3O96018 575 aa11.37□□□□□ -0.59
CENPE-207ENST00000515478 GPC6Q9Y625 555 aaPredicted RBP11.37□□□□□ -0.59
CENPE-207ENST00000515478 EML1O00423 815 aa11.36□□□□□ -0.59
CENPE-207ENST00000515478 SIN3BO75182 1162 aa11.35□□□□□ -0.59
CENPE-207ENST00000515478 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
CENPE-207ENST00000515478 TPCN2Q8NHX9 752 aa11.34□□□□□ -0.59
CENPE-207ENST00000515478 M0R082 166 aa11.33□□□□□ -0.6
CENPE-207ENST00000515478 SFSWAPQ12872 951 aaKnown RBP11.33□□□□□ -0.6
CENPE-207ENST00000515478 ZNF417Q8TAU3 575 aa11.33□□□□□ -0.6
CENPE-207ENST00000515478 ZNF587Q96SQ5 575 aaPredicted RBP11.33□□□□□ -0.6
CENPE-207ENST00000515478 EPHA4P54764 986 aa11.32□□□□□ -0.6
CENPE-207ENST00000515478 PSMA6P60900 246 aaKnown RBP11.32□□□□□ -0.6
CENPE-207ENST00000515478 SH3PXD2AQ5TCZ1 1133 aa11.32□□□□□ -0.6
CENPE-207ENST00000515478 CEP63Q96MT8 703 aa11.32□□□□□ -0.6
CENPE-207ENST00000515478 SLC30A3Q99726 388 aa11.32□□□□□ -0.6
CENPE-207ENST00000515478 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
CENPE-207ENST00000515478 SPEM2Q0P670 501 aa11.31□□□□□ -0.6
CENPE-207ENST00000515478 CCDC102BQ68D86 513 aa11.31□□□□□ -0.6
CENPE-207ENST00000515478 RBM19Q9Y4C8 960 aaKnown RBP11.31□□□□□ -0.6
CENPE-207ENST00000515478 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
CENPE-207ENST00000515478 TRIM28Q13263 835 aaKnown RBP11.3□□□□□ -0.6
CENPE-207ENST00000515478 RAB44Q7Z6P3 723 aaPredicted RBP11.3□□□□□ -0.6
CENPE-207ENST00000515478 POM121Q96HA1 1249 aa11.3□□□□□ -0.6
CENPE-207ENST00000515478 BRD7Q9NPI1 651 aa11.3□□□□□ -0.6
CENPE-207ENST00000515478 HCN4Q9Y3Q4 1203 aa11.3□□□□□ -0.6
CENPE-207ENST00000515478 ADH7P40394 386 aa11.29□□□□□ -0.6
CENPE-207ENST00000515478 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
CENPE-207ENST00000515478 TSPAN10Q9H1Z9 355 aaPredicted RBP11.29□□□□□ -0.6
CENPE-207ENST00000515478 USP17L3A6NCW0 530 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 USP17L4A6NCW7 530 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 SFI1A8K8P3 1242 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 FAM229AH3BQW9 127 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 ZMYM1Q5SVZ6 1142 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 USP17L1Q7RTZ2 530 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
CENPE-207ENST00000515478 ALBP02768 609 aa11.27□□□□□ -0.61
CENPE-207ENST00000515478 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
CENPE-207ENST00000515478 TBC1D8BQ0IIM8 1120 aa11.27□□□□□ -0.61
CENPE-207ENST00000515478 HSH2DQ96JZ2 352 aa11.27□□□□□ -0.61
CENPE-207ENST00000515478 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
CENPE-207ENST00000515478 PLEKHM2Q8IWE5 1019 aa11.26□□□□□ -0.61
CENPE-207ENST00000515478 MICALL1Q8N3F8 863 aa11.26□□□□□ -0.61
CENPE-207ENST00000515478 MDFIQ99750 246 aa11.26□□□□□ -0.61
CENPE-207ENST00000515478 KCNH4Q9UQ05 1017 aa11.26□□□□□ -0.61
CENPE-207ENST00000515478 C8orf86Q6ZUL3 223 aa11.25□□□□□ -0.61
CENPE-207ENST00000515478 OGFOD1Q8N543 542 aa11.25□□□□□ -0.61
CENPE-207ENST00000515478 POM121CA8CG34 1229 aa11.24□□□□□ -0.61
CENPE-207ENST00000515478 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
CENPE-207ENST00000515478 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
CENPE-207ENST00000515478 CLDN10P78369 228 aa11.24□□□□□ -0.61
CENPE-207ENST00000515478 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
CENPE-207ENST00000515478 BHMTQ93088 406 aa11.24□□□□□ -0.61
CENPE-207ENST00000515478 PRDM6Q9NQX0 595 aa11.24□□□□□ -0.61
CENPE-207ENST00000515478 STARD13Q9Y3M8 1113 aa11.24□□□□□ -0.61
CENPE-207ENST00000515478 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
CENPE-207ENST00000515478 PALM3A6NDB9 673 aaPredicted RBP11.23□□□□□ -0.61
CENPE-207ENST00000515478 ATP9BO43861 1147 aa11.23□□□□□ -0.61
CENPE-207ENST00000515478 TRAPPC3LQ5T215 181 aa11.23□□□□□ -0.61
CENPE-207ENST00000515478 HDGFL1Q5TGJ6 251 aa11.23□□□□□ -0.61
CENPE-207ENST00000515478 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
CENPE-207ENST00000515478 SUSD3Q96L08 255 aa11.23□□□□□ -0.61
CENPE-207ENST00000515478 UBE2OQ9C0C9 1292 aaKnown RBP11.23□□□□□ -0.61
CENPE-207ENST00000515478 IGFLR1Q9H665 355 aa11.23□□□□□ -0.61
CENPE-207ENST00000515478 MKRN1Q9UHC7 482 aaKnown RBP11.23□□□□□ -0.61
CENPE-207ENST00000515478 ITGB7P26010 798 aa11.22□□□□□ -0.61
CENPE-207ENST00000515478 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
CENPE-207ENST00000515478 RSPO4Q2I0M5 234 aaPredicted RBP11.22□□□□□ -0.61
CENPE-207ENST00000515478 ZNF594Q96JF6 807 aaPredicted RBP11.22□□□□□ -0.61
CENPE-207ENST00000515478 TPSG1Q9NRR2 321 aa11.22□□□□□ -0.61
CENPE-207ENST00000515478 M0R2N6 131 aa11.21□□□□□ -0.61
CENPE-207ENST00000515478 LILRB5O75023 590 aa11.21□□□□□ -0.61
CENPE-207ENST00000515478 TYRO3Q06418 890 aa11.21□□□□□ -0.61
CENPE-207ENST00000515478 FLIIQ13045 1269 aa11.21□□□□□ -0.61
CENPE-207ENST00000515478 GRIK4Q16099 956 aa11.21□□□□□ -0.61
CENPE-207ENST00000515478 TSEN2Q8NCE0 465 aaKnown RBP11.21□□□□□ -0.61
CENPE-207ENST00000515478 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.61
CENPE-207ENST00000515478 KCNQ4P56696 695 aa11.2□□□□□ -0.62
CENPE-207ENST00000515478 HIF1AQ16665 826 aa11.2□□□□□ -0.62
CENPE-207ENST00000515478 NGLY1Q96IV0 654 aa11.2□□□□□ -0.62
CENPE-207ENST00000515478 NID1P14543 1247 aa11.19□□□□□ -0.62
CENPE-207ENST00000515478 ALDH16A1Q8IZ83 802 aa11.19□□□□□ -0.62
CENPE-207ENST00000515478 ADAMTS19Q8TE59 1207 aa11.19□□□□□ -0.62
CENPE-207ENST00000515478 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
CENPE-207ENST00000515478 COL9A3Q14050 684 aaPredicted RBP11.18□□□□□ -0.62
CENPE-207ENST00000515478 PNMA5Q96PV4 448 aa11.18□□□□□ -0.62
CENPE-207ENST00000515478 UCN2Q96RP3 112 aa11.18□□□□□ -0.62
CENPE-207ENST00000515478 C9orf172C9J069 976 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms